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EBI DbfetchID M55537; SV 1; linear; genomic DNA; STD; PRO; 4197 BP. XX AC M55537; XX DT 22-JUL-1991 (Rel. 28, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 6) XX DE Butyrivibrio fibrisolvens beta-D-xylosidase/alpha-L-arabinofuranosidase DE gene, complete cds. XX KW alpha-L-arabinofuranosidase; beta-D-xylosidase; beta-xylosidase. XX OS Butyrivibrio fibrisolvens OC Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; OC Butyrivibrio. XX RN [1] RP 1-4197 RX PUBMED; 1905520. RA Utt E.A., Eddy C.K., Keshav K.F., Ingram L.O.; RT "Sequencing and expression of the Butyrivibrio fibrisolvens xylB gene RT encoding a novel bifunctional protein with beta-D-xylosidase and RT alpha-L-arabinofuranosidase activities"; RL Appl. Environ. Microbiol. 57(4):1227-1234(1991). XX FH Key Location/Qualifiers FH FT source 1..4197 FT /organism="Butyrivibrio fibrisolvens" FT /strain="GS 113" FT /mol_type="genomic DNA" FT /clone="pLOI 1005" FT /db_xref="taxon:831" FT CDS <1..1338 FT /codon_start=1 FT /transl_table=11 FT /label=ORF1 FT /note="ORF1" FT /db_xref="GOA:Q45158" FT /db_xref="InterPro:IPR002772" FT /db_xref="UniProtKB/TrEMBL:Q45158" FT /protein_id="AAA63609.1" FT /translation="NCGCTYEKLIYAYKAGLVKEETIDEAVTRLMEIRLRLGTIPERKS FT KYDDIPYEVVECKEHIKLALDAAKDSFVLLKNDGLLPLNKKDYKSIAVIGPNSDSRRAL FT IGNYEGLSSEYITVLEGIRQVVGDDIRLFHAEGTHLWKDRIHVISEPKDGFAEAKIVAE FT HSDLVVMCLGLDASIEGEEGDEGNQFGSGDKPGLKLTGCQQELLEEIAKIGKPVVLLVL FT SGSALDLSWAQESNNVNAIMQCWYPGARGGRAIAEVLFGKASPGGKMPLTFYASDDDLP FT DFSDYSMENRTYRYFKGTPLYPFGYGLGYSKIDYLFASIDKDKGAIGDTFKLKVDVKNT FT GKYTQHEAVQVYVTDLEATTRVPIRSLRKVKCLELEPGETKEVEFTLFARDFAIIDERG FT KCIIEPGKFKISIGGQQPDDRSKELMGRECDIFEIELTGSVTEVEY" FT CDS 1353..2906 FT /codon_start=1 FT /transl_table=11 FT /gene="xylB" FT /product="beta-D-xylosidase/alpha-L-arabinofuranosidase" FT /db_xref="GOA:P45982" FT /db_xref="InterPro:IPR006710" FT /db_xref="UniProtKB/Swiss-Prot:P45982" FT /protein_id="AAA63610.1" FT /translation="MVIANNPILKGFYPDPSICRKGDDFYLVCSSFVYAPGVPIFHTKD FT LAHFEQIGNILDRESQLPLSGDISRGIFAPTIREHNGIFYMITTNVSSGGNFIVTAKDP FT AGPWSEPYYLGEDEAPGIDPSLFFDDDGKCYYVGTRPNPDGVRYNGDWEIWVQELDLEQ FT MKLVGPSMAIWKGALKDVIWPEGPHLYKKDGYYYLLHAEAGTSFEHAISVARSKELFKW FT FEGCPRNPIFTHRNLGKDYPVCNVGHADLVDDINGNWYMVMLASRPCKGKCSLGRETFL FT AKVIWEDGWPVVNPGVGRLTDEVEMDLPEYRFSKEITTKDKMTFEETVLDDRFVGIERR FT SEDFYSLTDNPGFLRLKLRPEAIENTGNPSYLGIRQKTHSFRASCGLKFTPAKDNECAG FT MVLFQNNENHLELLVVKKKDKLQFKVGPVIKGTKIRLATFDISSGDLEIILEAANQLAN FT IYIKKNNEKILVAECIDLSPYTTEESGGFVGCTIGLYASSNGKTSDNYCDYSYFTVEEV FT " FT CDS 3030..4197 FT /partial FT /codon_start=1 FT /transl_table=11 FT /label=ORF3 FT /note="ORF3" FT /db_xref="GOA:P45981" FT /db_xref="InterPro:IPR005849" FT /db_xref="UniProtKB/Swiss-Prot:P45981" FT /protein_id="AAA63611.1" FT /translation="MLQESIKKLVQYGIDMGLTPECERIYTTNLLLECMKEDEYIDPDC FT DLSNIILEDVLKELLDEAVNRGIIEDSVTHRDLFDTKLMNQLCPRPKQVIDDFNRIYDN FT HGPIAATDYFYKLSKASDYIRTYRVKKDLKWTCDTEYGTLDITINLSKPEKDPKAIAAA FT KNAKQSTYPKCQLCMENEGYAGRINHPARENHRIIPITINNSNWGFQYSPYVYYNEHCI FT VFNGEHTPMKIERATFVKLFDFIKLFPHYFLGSNADLPIVGGSILSHDHFQGGHYTFAM FT EKAPIIQEFTVKGYEDVKAGIVKWPLSVIRLQCKDETRLIDLATNILDKWRNYTDEEAY FT IFAETDGEPHNTITPIARKRGDYFELDPLESTCRHASLALAVVLQRRDW" XX SQ Sequence 4197 BP; 1350 A; 666 C; 944 G; 1237 T; 0 other; aattgtggat gcacatatga aaagctgatt tatgcttata aggcaggtct tgtcaaggaa 60 gagaccatcg atgaggctgt tactcgactt atggaaatca gacttcgtct aggtactatt 120 ccagagagaa agagtaagta tgatgatatc ccatatgaag tggtcgaatg caaagagcat 180 atcaaacttg ctcttgacgc tgcaaaggat agctttgtcc ttttgaagaa tgatggttta 240 cttccactga ataaaaagga ttataaatct attgctgtta ttggacccaa ctctgattca 300 agaagagctt taattggaaa ttatgagggc ctttcttcag agtatattac agttttagag 360 gggattcgtc aggttgtcgg tgatgatatt agattattcc acgctgaggg cactcatctt 420 tggaaggata gaattcacgt aatcagtgag ccaaaagatg gatttgccga ggctaaaatc 480 gtggcagagc attcagattt agttgtgatg tgtcttggac ttgacgcatc aatcgaagga 540 gaagaaggag acgagggtaa tcagttcggt agcggagaca agcctggatt aaagcttaca 600 ggttgtcagc aagagctact tgaggaaatt gccaaaatcg gcaagcctgt tgtacttctt 660 gtgctttcag gttctgctct tgatttatca tgggcgcagg aatctaataa cgtaaatgcg 720 ataatgcagt gctggtatcc aggcgcaaga ggtggacgtg ctattgcaga ggttttattt 780 ggcaaggcca gtccaggcgg taaaatgcct cttacatttt atgcctcaga tgatgacctt 840 cctgattttt ctgattattc aatggaaaat aggacataca gatatttcaa gggcacacca 900 ctttatccat ttggttatgg actaggttat tctaaaattg attatctatt tgcttctatt 960 gataaagata agggagcaat tggtgataca ttcaagctaa aggtagatgt taaaaatacc 1020 ggtaagtata cacagcatga ggctgttcaa gtatatgtaa cggaccttga ggcaacgaca 1080 agagtgccta ttagaagcct tagaaaggtt aaatgtctag agcttgagcc tggtgaaaca 1140 aaagaggttg aatttaccct ttttgcaaga gattttgcca ttattgatga aaggggaaaa 1200 tgtatcatag agccaggcaa gtttaagatt tctattgggg gacaacagcc agacgataga 1260 agtaaagaac ttatgggcag agagtgtgat atttttgaaa ttgaattaac aggctctgtt 1320 acagaagttg aatattaatt gagaggtgca tcatggttat agctaacaat ccaattttaa 1380 aaggttttta tccagaccct tctatctgca gaaaagggga tgatttttat ctagtttgtt 1440 caagttttgt gtatgctccg ggagtaccga tttttcacac taaggatttg gcacattttg 1500 agcaaattgg aaatatatta gacagagaaa gtcaacttcc attgtcggga gatatatcta 1560 gaggcatatt tgccccaaca ataagagagc ataatggaat cttttacatg ataacaacta 1620 atgtaagctc tggcggcaac tttattgtta ctgcaaaaga tccagctggt ccttggtcag 1680 agccatatta tttaggtgaa gatgaggcgc caggtattga tccatctctg ttttttgatg 1740 acgatggcaa atgttattac gttggtacca gaccaaatcc tgatggagtt cgttacaacg 1800 gtgattggga gatatgggtt caagagctgg atttagagca aatgaaactt gtaggtcctt 1860 cgatggcaat ttggaagggc gctcttaagg atgttatttg gccagaagga ccacaccttt 1920 ataagaaaga tggatattat tatcttttac atgcagaagc tggcacaagc tttgaacatg 1980 ctatttctgt agctcgctca aaggagctat tcaaatggtt tgagggatgt cctagaaatc 2040 ctatatttac ccatagaaat ttaggcaagg attatccagt atgcaatgtt ggacatgctg 2100 atttagttga tgatatcaat ggcaactggt atatggtgat gctggcatct agaccatgca 2160 agggaaagtg cagcttggga cgagagacat tccttgcaaa agtaatttgg gaagacggat 2220 ggccagtggt taatccggga gttggtcgtt tgactgatga ggtggagatg gaccttcctg 2280 aatatagatt ctcaaaagag attactacaa aggataaaat gacctttgaa gagacagtcc 2340 tagatgatag atttgttgga attgaaagaa gaagtgagga cttttattcc cttactgaca 2400 atcctggatt cttaagatta aagcttcgtc ctgaggccat agaaaatact ggcaatccat 2460 cttacttagg aattcgtcaa aagactcatt cgtttagagc aagctgtggc cttaagttta 2520 caccagcaaa agataatgaa tgtgcaggaa tggtgttatt ccagaataat gaaaatcact 2580 tggagctttt agttgtaaag aagaaagata agctacagtt taaagtagga ccagttatta 2640 aaggaaccaa aatcagactt gctacttttg atatttcatc aggtgattta gaaattattc 2700 ttgaggcagc aaatcagctg gctaatatct atattaaaaa gaataatgaa aagattcttg 2760 tggcagaatg tattgatttg agcccataca ctaccgaaga atcaggcgga ttcgtaggat 2820 gtaccattgg actatatgct tcttcaaatg gaaagaccag tgataactat tgcgattatt 2880 cctactttac agtagaagaa gtatagcatt ttcaatgagc gaatttgcaa gttttatata 2940 cgggattaat tgtacgtaaa aaccatacag gtgtaaaata gtttccagag aaagtttttt 3000 ctctggaatt ttttattatg gaggggatta tgcttcagga aagtattaag aagttggtac 3060 agtacggtat tgatatgggg cttacaccag aatgtgagag aatatatact acaaatcttt 3120 tgcttgaatg tatgaaagaa gatgagtaca tagatccaga ctgtgattta agcaatatta 3180 tacttgaaga tgtattaaag gaacttttag atgaggcagt taatagaggt atcatagagg 3240 attcagttac acatagggat ttgtttgata caaagctaat gaatcagcta tgcccacgtc 3300 ctaaacaggt tatagatgat tttaaccgta tatacgataa ccatggtcca atagctgcaa 3360 cagattattt ttacaagtta agcaaagcct ctgactatat ccgtacttac agggtaaaaa 3420 aggacctaaa atggacatgc gatacagagt atggcactct tgacataaca attaatctct 3480 ctaagccaga aaaagaccca aaggcaattg ctgcagctaa gaatgcaaaa caatccacat 3540 atccgaagtg ccaattatgt atggaaaatg aaggctatgc tggtcgcatt aatcatcctg 3600 ctagagagaa tcatcgcata attcctataa ctataaataa cagcaactgg ggatttcaat 3660 atagcccata cgtttattac aatgagcatt gcatagtctt taacggagag catactccta 3720 tgaaaataga gcgagctact tttgttaagc tatttgattt tatcaaacta tttccacact 3780 attttttagg aagcaatgct gatttaccaa ttgttggagg atctatttta agccatgacc 3840 atttccaagg cggccattac acatttgcca tggaaaaagc tccaattatt caggaattta 3900 ctgtaaaagg atatgaggat gttaaggctg gtatagttaa atggccactt tcagtaatta 3960 gacttcagtg caaggatgag actagactta ttgatttagc gactaatata ttagacaaat 4020 ggagaaatta caccgatgaa gaggcatata tttttgctga aacagatggt gagcctcaca 4080 atacgattac acctattgct agaaaaagag gggattactt tgaactagat cctctagagt 4140 cgacctgcag gcatgcaagc ttggcactgg ccgtcgtttt acaacgtcgt gactggg 4197 // |
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