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EBI DbfetchID M55264; SV 1; linear; genomic DNA; STD; VRL; 6652 BP. XX AC M55264; M37900; XX DT 02-FEB-1991 (Rel. 26, Created) DT 15-NOV-2007 (Rel. 93, Last updated, Version 10) XX DE Herpesvirus saimiri dihydrofolate reductase (DHFR) and snRNA (HSUR) genes, DE complete cds. XX KW dihydrofolate reductase; small nuclear RNA gene; U RNA. XX OS Saimiriine herpesvirus 2 (Herpesvirus saimiri) OC Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; OC Gammaherpesvirinae; Rhadinovirus. XX RN [1] RP 1-6652 RX DOI; 10.1016/0042-6822(90)90020-R RX PUBMED; 2161148. RA Biesinger B., Trimble J.J., Desrosiers R.C., Fleckenstein B.; RT "The divergence between two oncogenic Herpesvirus saimiri strains in a RT genomic region related to the transforming phenotype"; RL Virology 176(2):505-514(1990). XX FH Key Location/Qualifiers FH FT source 1..6652 FT /organism="Saimiriine herpesvirus 2" FT /strain="488" FT /mol_type="genomic DNA" FT /db_xref="taxon:10381" FT CDS complement(454..>1226) FT /codon_start=3 FT /label=ORF1 FT /db_xref="GOA:P22575" FT /db_xref="PDB:1WA7" FT /db_xref="UniProtKB/Swiss-Prot:P22575" FT /protein_id="AAA72928.1" FT /translation="MANEGEEIELTEFPETEKERKDEEKLSSCSEETTNTSSSSGSDHV FT PVPIEVNVIIQNSSRTEDELQNSKEIELTGFQGKLSSCSEETTAPSSSYSSKQASVFIE FT ENGDNETSTYRPQNVLTNLNSLYTTFEDARAQGKGMVRHKSEDLQSFLEKYPPDFRKPK FT RDLSATWDPGMPTPPLPPRPANLGERQASTVRLHVKESNCKQPRERKANERNIVKDLKR FT LENKINVIICLVVVILAVLLLVTVLSILHIGMKS" FT CDS complement(1542..>1852) FT /codon_start=3 FT /label=ORF2 FT /db_xref="GOA:P22576" FT /db_xref="InterPro:IPR017095" FT /db_xref="UniProtKB/Swiss-Prot:P22576" FT /protein_id="AAA72929.1" FT /translation="MASEPNLRYPIEETGDRGPPGPPGPPGPQGPPGPQGPPGPQGPPG FT PPGPPGPPGPPGPPGPPGPPGPPGLPGLFVTNLLLGIIVLLLLIIVALLLVSKLVVN" FT CDS 1603..1914 FT /codon_start=1 FT /label=ORF3 FT /db_xref="UniProtKB/Swiss-Prot:P22577" FT /protein_id="AAA72930.1" FT /translation="MIPSNKFVTNNPGSPGGPGGPGGPGGPGGPGGPGGPGGPGGPCGP FT GGPCGPGGPCGPGGPGGPGGPRSPVSSIGYLRFGSLAIFFKTVCVALVSCFLCYSIFF" FT ncRNA 2840..2982 FT /label=HSUR1 FT /ncRNA_class="snRNA" FT CDS 3069..3326 FT /codon_start=1 FT /label=ORF4 FT /db_xref="UniProtKB/Swiss-Prot:P22578" FT /protein_id="AAA72931.1" FT /translation="MLKWSTLCFRFVRAMQQALFLTIFFHMQIFCIAFTYNSTFKCSLI FT TTSSLTCYKVLSTLYTQNSSKVYSTESTLYLFLNLSSTGF" FT ncRNA 3311..3425 FT /label=HSUR2 FT /ncRNA_class="snRNA" FT ncRNA 4030..4140 FT /label=HSUR5 FT /ncRNA_class="snRNA" FT CDS complement(4462..>5105) FT /codon_start=3 FT /gene="DHFR" FT /product="dihydrofolate reductase" FT /db_xref="GOA:P22573" FT /db_xref="HSSP:1KMS" FT /db_xref="InterPro:IPR017925" FT /db_xref="UniProtKB/Swiss-Prot:P22573" FT /protein_id="AAA72932.1" FT /translation="MVLLLNCIVAVDQNMGIGKKGHLPWPLLINDFKYFQRMTTSSVKN FT KQNLVIMGKNTWFSIPEKNRPLKDRINLVLSKKLKEIPHGAHFLARSLNDALKLIEQPE FT LVNKVDRVWIIGGSSVYKDAMNYSSHLKLFVTRIMQSFETDTFFPEIDLKNYKLLIEYP FT GVPSNTQEEKGIKYKFEVYEKIVNTFLFKSHAGLTCSVKPKEASYDFELS" FT ncRNA 5196..5298 FT /label=HSUR4 FT /ncRNA_class="snRNA" FT ncRNA 5942..6026 FT /label=HSUR3 FT /ncRNA_class="snRNA" XX SQ Sequence 6652 BP; 1961 A; 1214 C; 1062 G; 2415 T; 0 other; ctgcagagca gtctggccta gggggcttca gccagggcta gctccaaaac cctcaggtcc 60 ccagacttca aacttggtgg gcacgtagag gacccttccc gctaactctc cactctgcct 120 cagaatttta gcacctggcg ctgcggagcc gggagcgtgc aagcccccag agctctgggg 180 actagctcca agcacagggg cacagcgccc ccgagcctgc ggtggcctgg ggacagcgcc 240 tagccaatgc tatgaagact agccaaggct agcttcaaac ccctcaggtc cccagacttc 300 aaacttcgta ggcacgtaca aaacccttcc cgctccctgt ccgcaccgcc tcagaatttt 360 tgtacttggc gctgctgccc caaagtctca ggcatctttc tttgcatttc ttttaatcac 420 catgcacaca catttgttaa cagttttgtt acattaactt ttcattccta tatgcagtat 480 acttagcaca gttactaata gtagtacagc taatataaca actactaaac aaataattac 540 attaattttg ttctcaagtc ttttcaaatc ttttactata tttctttcat tagctttacg 600 ctctctaggt tgtttacaat ttgattcttt tacgtgcagt cttacagtac ttgcctggcg 660 ttcacctagg ttcgctggcc taggaggcaa aggtggtgtc ggcatgcctg gatcccatgt 720 tgctgacaag tcacgtttag gttttctaaa atctggtggg tatttttcca aaaaactttg 780 taaatcctcc gacttgtgtc gcaccattcc ttttccttgt gcccttgcgt cttcaaaagt 840 tgtgtacaag ctgttcaagt ttgttagcac gttctgaggc ctgtatgtgc tagtttcatt 900 gtcaccattt tcttctataa aaacagatgc ctgcttactg ctataactgc ttgacggggc 960 tgtagtctct tcagagcagg atgacaattt cccttgaaat cctgtcagtt ctatttcttt 1020 gctgttttgt aattcatctt ctgttctgct gctgttttgt attattacat ttacttctat 1080 aggaacaggc acatgatcac tgccactact gcttgacgtg tttgtagtct cttcagagca 1140 tgatgacaat ttctcttcat cttttctttc cttctcagtc tctggaaatt ctgtcagttc 1200 tatttcttct ccttcatttg ccattgcaaa gtttgtgctg ttttgtgatt caccttctgt 1260 tctgctgctg ttttgtatta ttgcaatttg gtgcagcctt tatatagcta ttaagtaact 1320 agtttttatg actattctta cttacatatt ccttattccg gcacagaaaa aaattcctta 1380 cttactaatt tagagatatg aagaggcagc taaaaaaggt cactactttc tataccattt 1440 tattcacact tataaattta ctaataaaaa gttccacaca actaactact agatgagatt 1500 aagctacata attaatatat tctataatgc ttgctttgct cttagtttac tactaattta 1560 gacacgagta agagcgcgac tataattaat aagagtaaaa ctatgattcc aagcaataaa 1620 tttgttacaa acaatcctgg cagtcctgga ggtcctggtg gtcctggtgg tcctggtggt 1680 cctggtggtc ctggtggtcc tggaggtcct ggtggtcctg gaggtccttg tggtcctgga 1740 ggtccttgtg gtcctggagg tccttgtggt cctggaggtc ctggaggtcc tggtggtcct 1800 cgatctcctg tttcttcaat tggatatctt aggttcggtt cgcttgccat ttttttcaag 1860 actgtttgtg ttgctcttgt tagctgtttc ttgtgttact ctattttctt ctgatactta 1920 tatgttagct tagtacattt tggaaactcc tgtgaccctt catctggtgt tttacaactt 1980 accacattta tagataattt caaattcaaa ttttactatt cagattttga cttttagaaa 2040 ccagaggtta agtctgctat cccacattgc ccacttcttg tctgacacat ttctctaccc 2100 actcttacct cataacacct tgctaaactc tcaaaatata ttttctctag catgttttta 2160 gaacatatca tagtatacaa ggtactgctt gaagactttt gagattttct agcattcctc 2220 attcgcattc taatctaaat gtctagtttg taaactcttc tttctacaat aatatacctt 2280 ttgtgatatt tttctgttat ctgtacgaca tagataaagc attaacagta ttcttaaaat 2340 acaattaaat tctaaaagag ttcagctgtt tataaaagaa acagtattgc taatatttgc 2400 attaatggga tactttttag ataggactag ctttgagctt ccttatagct aagaccacgt 2460 tttatttctc tccgacttca gatattccac aaagcttagc acagggaaag aatcagcttt 2520 agttcatgtt acttaggcga ataattaaag agagagaaga aagaaacatg caaaaaaaga 2580 agctaattaa ttgttcattt aaacctggct agtgctgaaa gcaaagccat aaagatattt 2640 gtcacattgt tcttgcctct cttttccctt agtgctaatt cgagatcttc tgtctagtca 2700 atgcagcaac atcaaagcat gaggggtgag agcagtgaca tgctaggtag tagcacacac 2760 ttgtgcattt gcgtgtttac tacatagtgt ggattactta tagaagttgc aaataaagtt 2820 tacttttaac tactttaagt ggtgctggtt actttatatt tacacccagc acctacaaaa 2880 attagctttt ggatggtaca gcaagtaagg ttagttacat gttaagttat agtaaacata 2940 gtaaataaat atgtagtgta ctagaaaaga agtatttgct gttttttggt aaaaacaact 3000 aatattttag tcatggttag tttttttaac gtttattgtt gtgtacaatt tatgcaatac 3060 atgactacat gttaaagtgg agcactctgt gctttcgttt tgtacgtgca atgcagcaag 3120 cattatttct aacaattttt tttcatatgc aaattttttg tatcgctttt acttacaact 3180 caacttttaa atgtagtttg atcactactt ctagtttaac ttgttataaa gtgctctcaa 3240 cactatatac tcaaaacagc agcaaagttt acagtactga gagcacacta tatctttttt 3300 taaacttaag tagcactggt ttttagctat atacacccag tgctttcaaa aattagtaga 3360 agcaaatcct tgtgtgtgag gtttaaagca gcattaataa ataaaataca ataaatatgt 3420 agtgtgcagc tttgtacact ttgctactct tagctaaatc taaccccttc taaagtcagg 3480 actagaaatt tagacttgac atttttaact tttaatttca aaagaaccgc ctacgcgaaa 3540 ggttatgaca ttttgttctt taaaaatttt agttacgcta gatatgactg ttttttaagc 3600 ccttattagt ctgagtaata ttcaaattat tgtcccagtt tcacttttag catgcttcct 3660 gtactttttc atgctttcaa ttctagaata caccattagc ggtgtagcta tctactacca 3720 actgagctaa ttgtaagcaa ctaaaaatct aaaacactta ttatttgtag caatctagct 3780 aacattttag ttatatgctt aagttaagat tctaaggaaa aaaatatgta gacgagaagc 3840 actgatgctg ctgccatctt tgtatctttt aacaagacag tctcttaaaa tgaaagcttt 3900 tattaacttg gaattactta tcaaaagttt aaaatctcaa ttatatatag tattactctc 3960 actgctgtag tttctcgcta aagtttgaag cagtaatagc atacttgctt gtttttttac 4020 ttacgtaaaa gtagctgtta ttgagcaaca cttactgctt ctaaaaactt aggaagtaat 4080 taaaagataa tgtatgcttt tcagttacag cacagcgagc acatataaag atgtagcact 4140 ctacttttac gacatcattc taattaagtc tctttgaaga aaaatgatgt ttgattttag 4200 tttttacaat tggtctactt agtacactaa gtgacacaaa acaaaggtta aaacttttta 4260 ttgaaacaaa atattcaaaa acgtaacatg acaccagcag ttaattatta aaacttataa 4320 caataaatgt atgtataatg tttatattgc tattttaaaa acgttttgtg tatagtaaac 4380 actgttaacg ttgcatgact tttttaattt tcttaaattt taatgttttg acacaacttt 4440 aagcaagttt aaagctttta tctaggagag ctcaaaatca taactagctt ctttaggctt 4500 cactgagcaa gtgagtcctg catgactttt aaatagaaaa gtattaacaa ttttttcata 4560 tacttcaaat ttgtacttaa ttcctttttc ttcttgtgtg ttagaaggaa ctcctgggta 4620 ttctattaaa agtttataat tctttaaatc aatttctggg aaaaaagtgt ctgtttcaaa 4680 gctttgcata attcttgtta caaacagttt aagatggctt gaataattca tagcgtcttt 4740 ataaacagaa ctgcctccaa ttatccatac tctgtctact ttatttacta attctggttg 4800 ttcaataagt tttaaggcat catttaaact tctagctaga aagtgagctc catgtggaat 4860 ctctttaagt tttttactga gaactaaatt aattctgtct tttagaggtc gatttttttc 4920 aggaattgag aaccacgtat tcttacccat aattactaaa ttctgtttat tttttacaga 4980 ggaagtagtc attctctgaa aatacttaaa gtcatttata agcagtggcc aaggcaagtg 5040 gccttttttg cctataccca tattctggtc tacagcaaca atacagttta gcaaaagaac 5100 cattagttat tgtaaatact cagtttttat aactttgtaa aaacaacttt tcacttttaa 5160 acaaaagcag tgtctttttt tttcacttgc aaagttggcc ctggtttggg ctaccccaga 5220 gcctccaaaa attaactgaa tttgaaactg ttagccactc ttgctgagag gttatttgtt 5280 aagtttaaga aaaaataatc ttattgatag ttatggtaat ttcataagtt agttattttg 5340 tttgtaaaac agtttactgt tacaaaaata aaacaacagt ttgtattaat ttatcttacc 5400 accattttat ttaaataagc agagtaagta tttttagtag gagtttaagt aatattcaaa 5460 tcactttaga actttcattt taagagaaac tttcttttcc tgttcattta aagctggtag 5520 aattgtaaga cattgcaagg tatatcttgt aatgtttact tagcatgtga ataacttctt 5580 tacgttataa gctattgttt ataagtttca ggtataattg ctcaactatg gctcgaaaaa 5640 gtttttacat tcactttgtt aagcttagta catcaatata atagtacaac ttttgctttc 5700 aaacgaatgg gcagtagcat aatttaaaag atgttaaaaa ataaaatatt ttctacaagt 5760 tgcagcacaa aaaaataaac tgattataac atactatttg aattaaacag ctattttact 5820 agtttaaaaa gctatgctta gattactgaa ctttcatttt gaatcaagct ctttcccagt 5880 taaataattc tgttaactca gaaaccttcc atatatgcaa ttctgttttt aacttaacca 5940 gtggcactag tttccctaaa tttgcctaag tacctagtgc ctccaaaaat taatcggaat 6000 tatcaaagca ttttgtggat ataaagctaa tttatactga gtttagctat agcgatgctg 6060 acttcttata agttatggtg ttgtacttta atttttaaat aaaaacattc tgctttactt 6120 tttttattta aaattattga tgcaaacctt tgtgctacta tttcaagaaa acaatatatt 6180 ttttttacaa caagtttaag aaatattcaa attactttat aactttcatt ttaagaagca 6240 cgttttttcc ggtggtgttt taatcagata caaattgctt cttgttgtag ctgtatttaa 6300 aaactattgt ttaattatta aagtcaattg ctgaacaaga cttttgtggc agaaacatgc 6360 ttgtcttaca ctttgactct tatgaaactc aaattcttcc acaggaaaga ttagcgactt 6420 cagttttttt agagaatggc ccactacaag ttacgtctca caacccaacc acgactaccg 6480 gatatgtggt ttacgtaaat tcccctaata cgtcatttct tgagcctgtt cttagtaaac 6540 tgtttctcag tgtttcacag aagctacctt tttctagggt ttctgaacaa actttgtcat 6600 tttcatatgg tcctcatctt caaggttcac agacaacatt ttcaaaagat ct 6652 // |
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