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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   M55019; SV 1; linear; mRNA; STD; PLN; 720 BP.
XX
AC   M55019;
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DT   13-FEB-1991 (Rel. 27, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 5)
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DE   Lycopersicon esculentum cyclophilin (CyP) mRNA, complete cds.
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KW   cyclophilin; peptidyl-prolyl cis-trans isomerase; rotamase.
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OS   Solanum lycopersicum
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; lamiids; Solanales; Solanaceae; Solanoideae; Solaneae; Solanum;
OC   Lycopersicon.
XX
RN   [1]
RP   1-720
RX   DOI; 10.1073/pnas.87.24.9519
RX   PUBMED; 1702215.
RA   Gasser C.S., Gunning D.A., Budelier K.A., Brown S.M.;
RT   "Structure and expression of cytosolic cyclophilin/peptidyl-prolyl
RT   cis-trans isomerase of higher plants and production of active tomato
RT   cyclophilin in Escherichia coli";
RL   Proc. Natl. Acad. Sci. U.S.A. 87(24):9519-9523(1990).
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FH   Key             Location/Qualifiers
FH
FT   source          1..720
FT                   /organism="Solanum lycopersicum"
FT                   /strain="VF36"
FT                   /mol_type="mRNA"
FT                   /clone="pMON9976"
FT                   /tissue_type="shoot tip"
FT                   /db_xref="taxon:4081"
FT   CDS             12..527
FT                   /codon_start=1
FT                   /gene="CyP"
FT                   /product="cyclophilin"
FT                   /EC_number="5.2.1.8"
FT                   /note="the published citation gene name is `CyP', but the
FT                   submission gene name is `Rot1'"
FT                   /db_xref="GOA:P21568"
FT                   /db_xref="InterPro:IPR002130"
FT                   /db_xref="InterPro:IPR015891"
FT                   /db_xref="UniProtKB/Swiss-Prot:P21568"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="AAA63543.1"
FT                   /translation="MANPKVFFDLTIGGAPAGRVVMELFADTTPKTAENFRALCTGEKG
FT                   VGKMGKPLHYKGSTFHRVIPGFMCQGGDFTAGNGTGGESIYGAKFNDENFVKKHTGPGI
FT                   LSMANAGPGTNGSQFFICTAKTEWLNGKHVVFGQVVEGMDVIKKAEAVGSSSGRCSKPV
FT                   VIADCGQL"
XX
SQ   Sequence 720 BP; 170 A; 149 C; 190 G; 211 T; 0 other;
     tctagagaga aatggcaaat ccaaaggttt tctttgacct taccatcggt ggtgcaccag        60
     ctggtcgtgt ggtgatggag ctcttcgccg ataccactcc caaaaccgct gagaacttcc       120
     gagctctttg taccggtgag aaaggtgttg gaaagatggg gaagcctttg cactacaagg       180
     gctcaacctt ccaccgtgtg atcccagggt tcatgtgtca aggaggtgat ttcaccgccg       240
     gaaacgggac cggaggagag tcgatctatg gagccaaatt caacgatgag aacttcgtta       300
     agaagcacac cggccctgga atcctctcca tggctaatgc tggacctgga accaacggtt       360
     ctcagttttt catctgtacc gctaagactg agtggctcaa cggaaagcac gtcgtgtttg       420
     gacaagttgt tgaaggcatg gatgtgatta agaaggcaga ggctgttgga tctagctctg       480
     gaaggtgctc caagcctgtg gttattgctg actgcggtca actctagatc tgatgatgat       540
     gatgatctag ttttatcagt cttttatgta tttgagtcgc cgttttaggc tttgttttta       600
     atttcaaact atctctactg ctttggtcgg gtcgtgtcgg gtcgagttct agggttaacc       660
     gtaattggtt gttgtgttgc ttctaccagt ttatgtttaa tcttaagact acaattaaaa       720
//
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