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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   M55018; SV 1; linear; mRNA; STD; PLN; 661 BP.
XX
AC   M55018;
XX
DT   13-FEB-1991 (Rel. 27, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 6)
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DE   Brassica napus cyclophilin (CyP) mRNA, 3' end.
XX
KW   cyclophilin; peptidyl-prolyl cis-trans isomerase; rotamase.
XX
OS   Brassica napus (rape)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons; rosids;
OC   eurosids II; Brassicales; Brassicaceae; Brassica.
XX
RN   [1]
RP   1-661
RX   DOI; 10.1073/pnas.87.24.9519
RX   PUBMED; 1702215.
RA   Gasser C.S., Gunning D.A., Budelier K.A., Brown S.M.;
RT   "Structure and expression of cytosolic cyclophilin/peptidyl-prolyl
RT   cis-trans isomerase of higher plants and production of active tomato
RT   cyclophilin in Escherichia coli";
RL   Proc. Natl. Acad. Sci. U.S.A. 87(24):9519-9523(1990).
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FH   Key             Location/Qualifiers
FH
FT   source          1..661
FT                   /organism="Brassica napus"
FT                   /sub_species="oleifera"
FT                   /strain="Westar"
FT                   /mol_type="mRNA"
FT                   /clone="pMON8612"
FT                   /tissue_type="flower bud"
FT                   /db_xref="taxon:3708"
FT   CDS             1..507
FT                   /partial
FT                   /codon_start=1
FT                   /gene="CyP"
FT                   /product="cyclophilin"
FT                   /EC_number="5.2.1.8"
FT                   /note="The published citation gene name is `CyP', but the
FT                   author submission gene name is `Rot1'"
FT                   /db_xref="GOA:P24525"
FT                   /db_xref="InterPro:IPR002130"
FT                   /db_xref="InterPro:IPR015891"
FT                   /db_xref="UniProtKB/Swiss-Prot:P24525"
FT                   /protein_id="AAA62706.1"
FT                   /translation="PKVYFDMTVGDKAAGRIVMELYADTVPETAENFRALCTGERGIGK
FT                   SGKPLHYKGSAFHRVIPKFMCQGGDFTAGNGTGGESIYGMKFKDENFVKKHTGPGILSM
FT                   RNAGSNTNGSQFFICTEKTSWLDGKHVVFGQVVEGMDVVRDIEKVGSDSGRTSKKVVTC
FT                   DCGQL"
XX
SQ   Sequence 661 BP; 159 A; 138 C; 182 G; 182 T; 0 other;
     cctaaagttt atttcgacat gaccgttggc gacaaagccg ccggccgcat cgtgatggag        60
     ctttacgccg acacagtccc cgagacggcc gagaacttcc gtgctctctg caccggcgag       120
     agaggaatcg gcaaatccgg aaagccactc cactacaagg gctcggcttt ccaccgcgtg       180
     atccccaagt tcatgtgcca aggaggagat ttcaccgccg ggaacggaac gggaggagag       240
     tcgatctacg gcatgaagtt caaagacgag aactttgtca agaagcacac cggtccgggt       300
     attctctcca tgcgtaacgc tggttcgaac acgaacggat ctcagttttt catttgcact       360
     gagaagacat cgtggctcga cgggaagcat gttgtgttcg gtcaagttgt cgaagggatg       420
     gatgtcgtta gagacattga gaaggttgga tctgacagtg gaaggacttc taagaaggtt       480
     gtgacctgtg actgtggtca gctttagatc tgatgagggg aaaaagagag aggttgttga       540
     tccaatggta gctttgtgtt ttttctctgt tgtgttttgt tttttgttct ggttttctct       600
     gtatttctat ggctaccatt gaataataat gataatgatt aatcttagtt attattgctc       660
     t                                                                       661
//
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