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EBI DbfetchID M38377; SV 1; linear; genomic RNA; STD; VRL; 2748 BP. XX AC M38377; M37146; XX DT 22-SEP-1990 (Rel. 25, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 2) XX DE Potato virus Y helper component mRNA, 5' end. XX KW helper component. XX OS Potato virus Y OC Viruses; ssRNA positive-strand viruses, no DNA stage; Potyviridae; OC Potyvirus. XX RN [1] RP 1-2748 RA Thornbury D.W., Patterson C.A., Dessens J.T., Pirone T.P.; RT ; RL Unpublished. XX RN [2] RP 944-2400 RX DOI; 10.1016/0042-6822(90)90356-V RX PUBMED; 2219708. RA Thornbury D.W., Patterson C.A., Dessens J.T., Pirone T.P.; RT "Comparative sequence of the helper component (HC) region of potato virus Y RT and a HC-defective strain, potato virus C"; RL Virology 178(2):573-578(1990). XX CC Draft entry and computer-readable sequence for [1] kindly submitted CC by D.W.Thornbury, 25-JUL-1990. XX FH Key Location/Qualifiers FH FT source 1..2748 FT /organism="Potato virus Y" FT /mol_type="genomic RNA" FT /db_xref="taxon:12216" FT CDS 180..>2748 FT /codon_start=1 FT /note="helper component" FT /db_xref="GOA:P22601" FT /db_xref="InterPro:IPR001456" FT /db_xref="InterPro:IPR002540" FT /db_xref="UniProtKB/Swiss-Prot:P22601" FT /protein_id="AAA47183.1" FT /translation="MAIYMSTICFGSIECKLPYSPASCGHVTEEREVLASVEPFMDLEA FT QLSARLLRQKHATVRVLKNGTCAYRYKTDAQIVRIQKKLERKERDEYHFQMAAPSIVSK FT ITIAGGDPPSKYEPQTPKRVIHTTPRVRKVKKHSIIKLTESQMNHLIKQVKRIMSAKKG FT SVHLINKKSTHVQYKEILGTTRAAVRTAHMMGLRRRVDFRCDMWTTERLKCLARTDKWS FT NRVHTINIRKGDSGVILNADSLKGHFGRSSGGLFIVRGSHEGKLYDARSKVTQGVLNSM FT VQFSNAENFWKGLDDNWARMRYPSDHTCIDGLPVEDCGRVAALMTHSILPCYEITCPTC FT AQQYANLPASDLFKLLHKHARDGLSRLGSDKDRFVHVNKFLVALEHLTEPVDLNLELFN FT EIFKSIGEKQQAPFKNLNVLNNFFLKGKENTAHEWQVAQLSLLELARFQKNRTDNIKKG FT DISFFRNKLSAKANWNLYLSCDNQLDKNANFLWGQREYHAKRFFSNFFEEVDPAKGYSA FT YEIRKHPNGTRKLSIGNLVVPLDLAEFRQKMKGDYRKQPGVSKRCTSSKDGNYVYPCCC FT TTLDDGSAIESTFYPPTKKHLVIGNSGDQKYVDLPKGDSEMLYIAKQGYCYINVFLAML FT INVSEEDAKDFTKKVRDMCVPKLGTWPTMMDLATTCAQMRIFYPDVHDAELPRILVDHD FT TQTCHVVDSFGSQTTGYHILKASSVSQLILFANDELESEIKHYRVGGVPNACPELGSTI FT SPFREGGVIMSESAALKLLLKGIFRPKVMRQLLLDEPHLLILSILSPGILMAMYNNGIF FT ELAVRLWINEKQSIAMIASLLSALALRVSAAETLVAQRIIIDAA" XX SQ Sequence 2748 BP; 838 A; 538 C; 638 G; 734 T; 0 other; aaacaactca atacaacata agaaaaacaa cgcaaaaaca cttacaaacg ctcattttca 60 ctcaagcaac ttgctaaatt tcagcttttg tctttttctt gcgattctct ttaacgatat 120 tgaaaaccgt cctagttcga caagctattt cacttctacc aactattagc atattctcca 180 tggcaatcta catgtcgaca atctgtttcg gttcaattga atgtaaatta ccgtactcac 240 ccgcctcttg cggacatgtc actgaagagc gagaggtgtt ggcttctgtt gagcctttca 300 tggatctgga ggcacagctt agcgcacgat tactcaggca aaagcatgca accgttcgtg 360 tattgaagaa cggtacttgt gcgtatcgat acaagactga cgcgcagata gtgcgtattc 420 agaagaaatt ggagaggaaa gagagagatg agtatcactt tcagatggcc gctccaagta 480 ttgtgtcaaa gattactatt gctggtggag atcccccatc gaagtatgag ccacaaacgc 540 cgaaaagagt cattcacacg actccaaggg tgcgtaaagt taagaaacac tccataataa 600 agttgacgga aagtcaaatg aatcacctta tcaagcaggt gaagcgaatt atgtcagcta 660 agaaagggtc tgtccaccta atcaataaga agagtacgca tgttcaatat aaggagatac 720 ttggaacaac tcgcgcggct gttcgtactg cacatatgat gggtttgcga cgaagagtgg 780 acttccgatg tgatatgtgg acaaccgagc gtttgaaatg tctcgctcga acagataaat 840 ggtcaaatcg agttcacacc atcaacatac gaaagggcga tagtggagtc atcttgaacg 900 ctgacagcct caaaggtcac tttgggagaa gttcgggagg cttattcata gtgcgtggat 960 cacatgaagg gaaattgtat gacgcacgtt ccaaagttac tcagggtgtt ttgaactcga 1020 tggttcagtt ctcgaatgct gagaattttt ggaagggtct ggacgacaac tgggcacgaa 1080 tgagataccc ttcagatcat acatgtatag atggtttacc agtcgaggac tgcggtaggg 1140 tcgctgcatt gatgacacac agcattctgc cgtgttacga gataacctgc cccacctgcg 1200 ctcaacaata tgccaacttg ccagccagcg atctgttcaa gctgctgcat aaacatgcaa 1260 gggatggttt gagtcgattg ggatcggata aagacagatt tgtgcatgtt aataagttct 1320 tggtagcgtt ggagcatcta actgaaccag ttgatttgaa tctcgagctt ttcaatgaga 1380 tatttaaatc cataggggag aagcagcaag caccattcaa gaatttgaat gtcttaaaca 1440 atttctttct aaaaggaaaa gaaaatacag ctcatgaatg gcaggtggct caattgagtt 1500 tgctcgaatt agcaaggttc cagaagaata gaactgataa catcaagaaa ggtgacatat 1560 ctttcttcag gaataaacta tctgccaaag caaactggaa tctgtatttg tcgtgcgaca 1620 atcagttgga taaaaatgca aacttcttgt ggggacaaag ggagtatcat gctaagcggt 1680 ttttctcaaa cttctttgag gaagttgatc cagcaaaggg atactcagca tatgaaatcc 1740 gcaagcatcc gaatggaact aggaagctct caattggtaa cttggttgtc ccacttgatt 1800 tagctgagtt tagacagaag atgaaaggtg actataggaa acaaccaggg gtcagcaaaa 1860 ggtgcacgag ttcgaaagat ggtaattatg tgtatccctg ctgttgcaca acacttgacg 1920 atggctcagc cattgaatca acattctatc cgccaactaa aaagcacctt gtaataggca 1980 atagtggtga ccaaaaatat gttgatttac caaaagggga ttcggagatg ttgtacatcg 2040 ccaagcaagg ttattgctat atcaacgtat ttcttgcaat gctgattaac gtcagcgagg 2100 aggacgcgaa ggatttcaca aagaaagttc gcgacatgtg tgtgccaaag cttggaacct 2160 ggccaactat gatggatttg gcgactactt gtgctcaaat gagaatattc tatcctgacg 2220 tgcatgatgc agaactgccc agaatattag ttgaccatga cactcaaacg tgtcacgtgg 2280 ttgactcttt tggttcgcaa acaactgggt atcatattct aaaagcatct agtgtgtctc 2340 aacttatctt gtttgcaaat gatgagttag aatctgaaat aaaacactat agagttggtg 2400 gtgttcctaa tgcatgccct gaacttgggt ccacaatatc acctttcaga gaaggaggag 2460 ttataatgtc tgagtcggca gcgctaaaac tgcttctaaa ggggattttc agacctaagg 2520 tgatgagaca gttgctgttg gatgagcctc acctattgat tctatcaata ttatcccctg 2580 gcatactgat ggctatgtat aataatggga tttttgaact tgcggtgagg ttgtggatta 2640 atgagaaaca atctatagcc atgatagcat cgttgctgtc agctttagct ctacgagtgt 2700 cagcggcaga aacactcgtc gcacagagga tcataattga tgctgcag 2748 // |
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