 |
|
EBI DbfetchID M37480; SV 1; linear; genomic DNA; STD; UNC; 2353 BP. XX AC M37480; XX DT 31-OCT-1990 (Rel. 25, Created) DT 15-JAN-2007 (Rel. 90, Last updated, Version 5) XX DE TOL plasmid of P.putida xylene monooxygenase (xylM and xylA) genes, DE complete cds. XX KW xylene monooxygenase. XX OS TOL plasmid OC other sequences; plasmids. OG TOL plasmid XX RN [1] RP 1-2353 RX PUBMED; 1999388. RA Suzuki M., Hayakawa T., Shaw J.P., Rekik M., Harayama S.; RT "Primary structure of xylene monooxygenase: similarities to and differences RT from the alkane hydroxylation system"; RL J. Bacteriol. 173(5):1690-1695(1991). XX CC Draft entry and computer-readable sequence for [Unpublished (1990)] CC kindly submitted CC by Harayama,S., 03-AUG-1990. CC Dept of Med Biochem, CMU CC University of Geneva CC 1 rue Michel-Servet CC 1211 Geneva 4, Switzerland. XX FH Key Location/Qualifiers FH FT source 1..2353 FT /organism="TOL plasmid" FT /plasmid="TOL plasmid" FT /mol_type="genomic DNA" FT /cell_line="pWWO" FT /db_xref="taxon:2428" FT RBS 18..21 FT /gene="xylM" FT gene 18..1137 FT /gene="xylM" FT CDS 28..1137 FT /codon_start=1 FT /transl_table=11 FT /gene="xylM" FT /product="xylene monooxygenase" FT /db_xref="GOA:P21395" FT /db_xref="InterPro:IPR005804" FT /db_xref="UniProtKB/Swiss-Prot:P21395" FT /protein_id="AAA26026.1" FT /translation="MDTLRYYLIPVVTACGLIGFYYGGYWVWLGAATFPALMVLDVILP FT KDFSARKVSPFFADLTQYLQLPLMIGLYGLLVFGVENGRIELSEPLQVAGCILSLAWLS FT GVPTLPVSHELMHRRHWLPRKMAQLLAMFYGDPNRDIAHVNTHHLYLDTPLDSDTPYRG FT QTIYSFVISATVGSVKDAIKIEAETLRRKGQSPWNLSNKTYQYVALLLALPGLVSYLGG FT PALGLVTIASMIIAKGIVEGFNYFQHYGLVRDLDQPILLHHAWNHMGTIVRPLGCEITN FT HINHHIDGYTRFYELRPEKEAPQMPSLFVCFLLGLIPPLWFALIAKPKLRDWDQRYATP FT GERELAMAANKKAGWPLWCESELGRVASI" FT gene 1274..2339 FT /gene="xylA" FT RBS 1274..1276 FT /gene="xylA" FT CDS 1287..2339 FT /codon_start=1 FT /transl_table=11 FT /gene="xylA" FT /product="xylene monooxygenase" FT /db_xref="GOA:P21394" FT /db_xref="InterPro:IPR001041" FT /db_xref="InterPro:IPR001221" FT /db_xref="InterPro:IPR001433" FT /db_xref="InterPro:IPR001709" FT /db_xref="InterPro:IPR006058" FT /db_xref="InterPro:IPR008333" FT /db_xref="InterPro:IPR012675" FT /db_xref="InterPro:IPR017927" FT /db_xref="InterPro:IPR017938" FT /db_xref="UniProtKB/Swiss-Prot:P21394" FT /protein_id="AAA26027.1" FT /translation="MNEFFKKISGLFVPPPESTVSVRGQGFQFKVPRGQTILESALHQG FT IAFPHDCKVGSCGTCKYKLISGRVNELTSSAMGLSGDLYQSGYRLGCQCIPKEDLEIEL FT DTVLGQALVPIETSALISKQKRLAHDIVEMEVVPDKQIAFYPGQYADVECAECSAVRSY FT SFSAPPQPDGSLSFHVRLVPGGVFSGWLFGGDRTGATLTLRAPYGQFGLHESNATMVCV FT AGGTGLAPIKCVLQSMTQAQRERDVLLFFGARQQRDLYCLDEIEALQLDWGGRFELIPV FT LSEESSTSSWKGKRGMVTEYFKEYLTGQPYEGYLCGPPPMVDAAETELVRLGVARELVF FT ADRFYNRPPC" XX SQ Sequence 2353 BP; 546 A; 518 C; 630 G; 659 T; 0 other; gtcgacaata ataaagtagg tggatatatg gacacgcttc gttattacct gattcctgtt 60 gttactgctt gcgggctgat cggattttac tatggtggct attgggtttg gcttggggcg 120 gcaacattcc ctgcactgat ggtgcttgat gtcattttac cgaaggattt ttcggccaga 180 aaggtaagtc cctttttcgc agaccttacc cagtatttgc agttaccatt aatgatcggt 240 ctatatgggc tccttgtctt cggagttgaa aacgggcgta tcgaacttag tgagccgtta 300 caagtggcag ggtgcattct ttctttggct tggcttagtg gtgtgccaac tcttccggtt 360 tcgcatgagt tgatgcatcg tcgccactgg ttgcctcgga aaatggcgca gctattggct 420 atgttttatg gtgatccgaa ccgagacatt gcccatgtca acacgcatca cctttactta 480 gatacgcctc tcgatagcga tactccgtac cgtggtcaga caatttacag tttcgtgatc 540 agtgcgacag ttggttccgt caaagatgcg ataaagattg aggctgaaac tttacgtaga 600 aaaggacagt caccgtggaa tttgtccaac aaaacatatc aatatgtcgc acttctgctc 660 gctctgcctg gcttggtttc ttatctgggc gggccagcat tagggttggt tacgattgct 720 tcgatgatta ttgcgaaagg gatagtcgag ggttttaatt actttcagca ctatggttta 780 gtacgcgatt tagatcagcc tatcctcctg caccacgcgt ggaatcatat gggaacaatt 840 gtgcgcccgc tgggttgcga aattactaac catatcaatc atcatattga cggctataca 900 cggttctatg agttgcgtcc ggaaaaagaa gccccgcaga tgccttcgct ctttgtgtgt 960 ttccttctag ggcttattcc gcctctttgg ttcgctctca ttgcaaaacc aaagttgaga 1020 gactgggacc agcggtacgc aactccaggt gagcgcgaac tggctatggc tgcaaataaa 1080 aaagcgggat ggccactgtg gtgtgaaagt gaactgggtc gggtggctag catttgataa 1140 tacaggcagt ctaaaccgtt tcgactgaga ccgtagataa gcgaagagcg aacgaactct 1200 acggtctctt tttgaaaaaa acgttccaaa tgggacaaag tttccgtttt ttctaattaa 1260 cgggcgtcta actgagcgat gggtttatga atgagttttt taagaaaatc tctggtttat 1320 ttgtgccgcc tccggaatct accgtttcag tcagagggca ggggtttcag tttaaggtgc 1380 cacgcgggca aaccattctg gaaagcgctc tgcatcaagg aattgccttt ccgcatgatt 1440 gcaaagtcgg atcttgtggg acatgtaaat ataaactgat atctggcagg gtcaatgagt 1500 tgacctcttc tgctatgggt ctgagtggcg atctgtatca gtccggctat cgtttgggtt 1560 gtcaatgcat accaaaagaa gatctcgaga tagagctaga cacagtgctc gggcaggcgt 1620 tagttccaat agaaacgagt gccttgatta gtaagcagaa acggctggcg cacgatatag 1680 tcgagatgga agtagtgccc gataagcaga tagccttcta ccccggccag tatgcagatg 1740 tagaatgtgc agaatgctct gctgtaagga gttattcttt ttccgctccg ccccaacctg 1800 acggctccct gagcttccat gttcgccttg tcccaggtgg agttttcagt ggttggctat 1860 ttggtggcga tcgtacagga gcgacactaa ccctgcgagc gccttatgga cagttcgggc 1920 tccatgagag caatgccacg atggtctgcg tagccggcgg aacggggctt gctccaatta 1980 aatgtgtttt gcagagcatg acccaggccc agcgagagcg tgatgtgttg ttgttctttg 2040 gagctcgtca acaacgtgac ctatattgcc tcgacgaaat agaagcgctg caactcgatt 2100 ggggtgggcg cttcgagctt attccagttt tgtccgaaga gtcttctacg tcgtcatgga 2160 aagggaaacg tggcatggta accgagtatt ttaaggagta cctcactggg cagccttatg 2220 aaggatacct ttgcgggccg ccccctatgg tggacgctgc cgagaccgag ctcgttcgac 2280 ttggtgttgc gcgggaatta gtgtttgcgg accgttttta taatagacct ccttgctagc 2340 agtagcagaa gct 2353 // |
|