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EBI DbfetchID M28071; SV 1; linear; genomic DNA; STD; VRL; 5729 BP. XX AC M28071; XX DT 02-FEB-1990 (Rel. 22, Created) DT 15-NOV-2007 (Rel. 93, Last updated, Version 7) XX DE Herpesvirus saimiri transformation-associated protein (STP), and DE dihydrofolate reductase (DHFR) gene,s complete cds, and small nuclear RNAs DE (uRNAs). XX KW dihydrofolate reductase; small nuclear RNA; KW transformation-associated protein; uRNA. XX OS Saimiriine herpesvirus 2 (Herpesvirus saimiri) OC Viruses; dsDNA viruses, no RNA stage; Herpesvirales; Herpesviridae; OC Gammaherpesvirinae; Rhadinovirus. XX RN [1] RP 1-5729 RX PUBMED; 2545905. RA Murthy S.C., Trimble J.J., Desrosiers R.C.; RT "Deletion mutants of herpesvirus saimiri define an open reading frame RT necessary for transformation"; RL J. Virol. 63(8):3307-3314(1989). XX FH Key Location/Qualifiers FH FT source 1..5729 FT /organism="Saimiriine herpesvirus 2" FT /mol_type="genomic DNA" FT /db_xref="taxon:10381" FT CDS complement(400..894) FT /codon_start=1 FT /gene="STP" FT /product="transformation-associated protein" FT /db_xref="GOA:P18347" FT /db_xref="InterPro:IPR016318" FT /db_xref="UniProtKB/Swiss-Prot:P18347" FT /protein_id="AAA58725.1" FT /translation="MARGLGEGDPQENDESNGDPPHNTDERSDGDDGPTPYLPVTLLNA FT GPFGPYNPYCLLGHPVQESGCPGRPTALSGAVGLPTPSGSRSSSHLSTPVGLSAVRVSG FT CGGAGSEEHVYAEVGSLHSEHEQEGDKCTDCSVTILLLLVIIVLLLIIIGLMLVIMFKK FT M" FT ncRNA 1695..1837 FT /gene="UR1" FT /product="small nuclear RNA" FT /ncRNA_class="snRNA" FT ncRNA 2551..2665 FT /gene="UR2" FT /product="small nuclear RNA" FT /ncRNA_class="snRNA" FT ncRNA 3220..3333 FT /gene="UR5" FT /product="small nuclear RNA" FT /ncRNA_class="snRNA" FT CDS complement(4149..4712) FT /codon_start=1 FT /gene="DHFR" FT /product="dihydrofolate reductase" FT /db_xref="GOA:P09503" FT /db_xref="InterPro:IPR001796" FT /db_xref="InterPro:IPR012259" FT /db_xref="InterPro:IPR017925" FT /db_xref="UniProtKB/Swiss-Prot:P09503" FT /protein_id="AAA58726.1" FT /translation="MVQALNCIVAVAQNMGIGKQGNLPWPRLMNDFKHFQRMTTTSSVP FT DKQNLVIMGKKTWFSIPEKNRPLKGRINVVLSKELKELPHRAHFLAKSLDDALKLTEQP FT ELANKVDMVWIIGGSSVYKEAMSYPCDLKLFVTRIMQDFECDTFFPEFDLEKYKLLIEY FT PSVLSNVQEEKSIKYKFEVYEKNH" FT ncRNA 4857..4932 FT /gene="UR3" FT /product="small nuclear RNA" FT /ncRNA_class="snRNA" FT ncRNA 5283..5388 FT /gene="UR4" FT /product="small nuclear RNA" FT /ncRNA_class="snRNA" XX SQ Sequence 5729 BP; 1753 A; 963 C; 965 G; 2048 T; 0 other; gcgctgggct ctggggctgg gggggcttga acagttgtgg gacccttact ctagcagcgc 60 ctcggcctag ccagggctct ggggactggc tctaagcaca ggggcacagc gcccccgggc 120 ctgcggtggc ctggggacac aacaggagct ctggaatctc agcccagagg ggtgcggggc 180 ggtcgcgagg gtctagcgcc tcgaaaccgg ctcggagcac aagcagactc tagccccctc 240 ccctagtaca cagagcccag caggcagcta cagccgctca acgcgagtcc ctccccttgc 300 tcaagctctt tagtacactt tttgtctttt atacaatagt tttattactg catagtataa 360 gacatttact gcagcactat gtgattcact ttgattcttt tacatttttt taaacataat 420 tactagcatt aaaccaatta tgattaatag caaaacaata ataactagca gcaataggat 480 agttacagaa cagtctgtgc atttgtcacc ttcttgctcg tgttcactgt gcaggcttcc 540 gacttctgcg tagacatgtt cttcacttcc tgctcctccg cagccactga cacgtactgc 600 tgataagcct actggggtgc ttaaatgtga tgagctccgt gagccagatg gtgttggtaa 660 gcctactgct cccgatagtg ctgttggtct tcctgggcat ccgctttctt gcactgggtg 720 gccaagcaag cagtagggat tataaggccc aaagggccct gcatttaaaa gcgttacagg 780 taagtatggt gtaggtccat catctccatc acttctttca tcagtattgt gtggaggatc 840 tccgttgctt tcatcgtttt cttgtgggtc tccttcacct agacctcttg ccattttctt 900 acacgtctaa gcttcagttt gtttagctga ttcttgtagt gttgtctgtc ttgctaattc 960 ttatatagta gcttgttact tcttggaaag tccagcaaga tggtgtcctg tttaacagct 1020 tgaccacatg ttttacagga cttaaaaatt taaattttaa ccttttgaca aagagcaaaa 1080 atgaataaaa agctacagct gtatgactct tatcttttaa catagtagca atgcacttac 1140 gtgttaactt attttattat aagttgatgc ttgctattgt agtgcttata gcagctttta 1200 tatcagcttt tagtagttat tgctagcttt atctagcttt gctctcaatg agctataaat 1260 aaaaatataa aatccacatt gattactata caagacaatg aagatgctac tcacgtgtgt 1320 tatctacagt ttaattatag ataaaagaca aatgatgctt taccaactta agaactacat 1380 gacatgtgtt ttctagattc tacatgatag tagaatcttg aagctttaca ggtcttctgt 1440 ctagaaggca tatagtaaag ataaagctta tctagtgtct tcaaaagtaa gtagtagaga 1500 agacaacatg tagcatatca ctgagtaact taattaagaa tacagagata aaaaaatttg 1560 ttcatagaga ttaaacagtg agtaagttag tcagtttaac agctagtgat ataaaatgat 1620 acacttgaga acagaagttc tgtgtttgca gagatctcgg taaataccca aagtctactt 1680 ttaacttact tagatggtac cggtcatcat atttacaccc agtacctaca aaaattggtc 1740 agcaagtaac gggttgtttg agacttttag tttaggttat cacagattta agttccagta 1800 aacattacta agaaataaat aaataaatat gtagtgtact ttagcagctc tatttgacta 1860 gtcttcaaaa aggcaacact gtttttagtt agggtaatgg gttagtattc ttaaagttgc 1920 ttacaattta tgcactacat gactacacat taaaagtaga agcatgttgt gttttctctt 1980 taaagtacag cataaccaga gattgttttt aacatattta tgtaatatgc aaatttctga 2040 atcactttca tttcagagag gactcaaaaa ctactgcttt gtaatatatt agctatgctc 2100 actaaacttc attaatcaag cttaattttt ttatttgtta taaaatatat acttgtagta 2160 gtttgtgcag tatgtttgtg aaataatgtg taattgtaca ctacaattta tcattgttat 2220 ttacttacaa agcaaactca caagtttact atttagctac aagtttctta aaaacaatat 2280 tttgtatatt gtttttaaga aacttgtagc tagttttttg aactttttag tgcaacacag 2340 ttcttgactt ttgagaagtt tatgcttaat tgcaagacat catgaaactt tattacttaa 2400 attttgttta aatagctaca aatttattaa gcatagagca ttgctttata aacaattttt 2460 agttttagag aagtgctctc aaggctctaa aacttttaaa cacaaagttt aaagccttga 2520 gagcacagat accttttttt aaacttaagg cagcgctggt ttttaaatat gtacacccag 2580 cgctttcaaa aattagtaga agcgatacct cgtgtgtgat taaagcagca ttatcaggta 2640 taaataaaca ataaatatgt agtgtgctta attgctagaa tttgttaccc ctggctaact 2700 ttaacatatt ttaaagttag ggtggtggtt ttatctttca catttttaac tttttagttc 2760 caaagaaccg cctacatcaa aagttagggc attttgctga aaaggtcata gttaaaacgt 2820 aactatctat gatcttttcc tcggctgcta ttctgagtaa tattcaaatt cttgttaaag 2880 tttcactttc agcctacact atgtactttt ttatgctttt aattatagac tgacatataa 2940 agtgcaagca ttagtagtgt atatatacag taaagtcagc taattttaag aaagtacatt 3000 aaaaagctag caaatttgtt tttaacttac agatcttaaa catttacatg catacgttaa 3060 aaacattaaa gcagtagggg ctagtgctta cagacagtca tcactaagtg atgttacaag 3120 gaagttctaa ataatgtagc agcgctctca ctgctgtaac ttcttgttga agtatcaagc 3180 agtaagagcg cggactttct gtttttgtac tgacttaggc ggctctggtt gttagtaaca 3240 caccattgcc tccaaaaatt gaacaggtaa ttggaaaaag actacatgct cctcagttac 3300 agctttgcga gcgaaaaata aatatgtagt gttcccttta agcaatattt tcttcttata 3360 agtttctatt actagttttt aagttagggt atgcggtagt tttcttacaa tttgtctact 3420 taatgcactc tagtgacgca taagaaaagt taaaacattt ttattgaaag gcattactta 3480 aaagatagca caatattttc cctaagtact tatattctga gtaatattca aattacttta 3540 aaagctctaa tttcctgctg tttgctgcac tgttcatact tactgtgttt aaagctattt 3600 gctacataaa tgtatagttt ttaaacaaag ttaataataa cactaatata aaaatatata 3660 ttttgttaca agcttgtgtt gctgttttac tttcattatt gtagagcttc catttctaaa 3720 agaaagtatc tttatatgcg tttgtaaaaa acagttattt actagttagt gagtaatttt 3780 tgttataaaa gttttagtta ttaagtgtat gtaaaacttc acaataagtc agtattagct 3840 attagtatag tattttcgga gcacgcagct tataacagtt ttctttgctt tctcggcaca 3900 agcactttca ttttctggcc gcttttaaat gcttagctca catatatttt atatataact 3960 tgtatctgta ttagaatctt ttcttatact ttagcttact ataatttaaa attagaaata 4020 tcaaataatt ctgtagctat ctaaaagcat tttgtgtata ctaaaagctg atagagttgt 4080 gtgaatttat aatgtatatg taagttttca caaatacatg acatcttcac ctgtaaaaga 4140 catttgtatt aatgattctt ctcatatact tcaaatttgt acttaatact tttctcttct 4200 tgcacattag aaagaacact tggatattct atcaaaagtt tgtatttctc tagatcaaat 4260 tctggaaaaa aggtgtcaca ttcaaagtct tgcatgatcc tagtcacaaa cagtttaaga 4320 tcgcatggat aactcatagc ttctttatac acagaactac ctccaattat ccagaccatg 4380 tctactttat ttgctaattc tggctgttcg gtaagtttta aagcatcatc taaactctta 4440 gctaaaaaat gagctctatg tggaagctcc tttagttcct tgctgagaac aacattaatt 4500 ctgcctttta aaggccggtt cttctcagga attgagaacc aagtcttttt acccataatc 4560 actaaattct gtttatctgg tacagaagat gtagtagtca ttctttggaa atgtttaaaa 4620 tcattcataa gtcttggcca aggcaagtta ccttgtttgc caatgcccat gttttgagct 4680 acagcaacaa tgcagtttag tgcttgaacc ataatactaa ctaaagactt cttcttctct 4740 agtaataaaa agtaaataat cttgctgtat ttttctagtg tattttttgt ttgtgtttta 4800 aagctactga tactagaatt tacaagtttt aacgtctgtt ttttaacttc taaaggtggc 4860 actggtttgg acctaaagac ccagagcctt caaaaattat tcttgggttg ttaatctcct 4920 atagcaagtc ttaaatatac atgctatttg tttataacat ataacactat ctattattta 4980 agttatggta agttttgttt gtaagtttct taaaaatata acataattgg ctttctacaa 5040 aagtgcaagc aagctgttgt aagattcttt tataaatttt tatcgtaatt ttttttacaa 5100 aaaggacaga gaatactcaa attacttcag agctttcatt ttaaaaaatt acatcctctt 5160 cctgtgtaat gtttgagtgc tgaatttttg agatgagacg tgttgcccac tgctataaac 5220 tgcatgtttg aagtttatag ctgtagcaac acggtttttt ttctgttttt aaacttacta 5280 agtggcactg gtttggacta ccccagagcc ttcaaaaatt gctgagtgct tctgaaactg 5340 agaagctcca actgtatgaa cctgaagagt aactctctgg ctgtgggcag tctctgttca 5400 agtatttgtt tactttaagt aaaaataatc ttcttttaag ttatagtaag ttaagaattt 5460 tgtctgtaaa acagattaat gcaaaatagc aaaataaaag tgtatgtgaa caattcttac 5520 tactatatag atatacagta gttatttttt ataagaagtt taattaagct gtattcaaat 5580 gactttatag cttttatttc ctgtaacatt ttataatttg catttcctgt aatatttttt 5640 atgcaatatt ttttagtaca cgaatacatg ttcaaaatta ttgttgattt tttaaagcta 5700 agttttaaaa agcttgtttg tttagtact 5729 // |
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