spacer
spacer
EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   M26978; SV 1; linear; genomic DNA; STD; PRO; 1686 BP.
XX
AC   M26978;
XX
DT   23-NOV-1989 (Rel. 21, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 16)
XX
DE   Methanothermus fervidus Asn-, Met-, Glu-, Leu-, and His-tRNA genes and ORF,
DE   5' end.
XX
KW   transfer RNA-Asn; transfer RNA-Glu; transfer RNA-His; transfer RNA-Leu;
KW   transfer RNA-Met.
XX
OS   Methanothermus fervidus
OC   Archaea; Euryarchaeota; Methanobacteria; Methanobacteriales;
OC   Methanothermaceae; Methanothermus.
XX
RN   [1]
RP   1-1686
RX   DOI; 10.1016/0378-1119(89)90073-5
RX   PUBMED; 2473943.
RA   Haas E.S., Daniels C.J., Reeve J.N.;
RT   "Genes encoding 5S rRNA and tRNAs in the extremely thermophilic
RT   archaebacterium Methanothermus fervidus";
RL   Gene 77(2):253-263(1989).
XX
DR   RFAM; RF00005; tRNA.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1686
FT                   /organism="Methanothermus fervidus"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:2180"
FT   gene            complement(1..565)
FT                   /gene="ORF4"
FT   CDS             complement(1..565)
FT                   /partial
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="ORF4"
FT                   /db_xref="GOA:P22624"
FT                   /db_xref="InterPro:IPR000994"
FT                   /db_xref="InterPro:IPR001714"
FT                   /db_xref="InterPro:IPR002467"
FT                   /db_xref="InterPro:IPR018349"
FT                   /db_xref="UniProtKB/Swiss-Prot:P22624"
FT                   /protein_id="AAA72775.1"
FT                   /translation="MEKFKKAGKIASKVRKKAIKAVKGEMKILDLAEFIENEIEKMGAK
FT                   PAFPCNISVNEITAHYSPPCNDDRKILPGDLVKIDIGVHVDGFIGDTATTVLVEGYEDL
FT                   KNYNDELAEKNKKMIEAAESALENAINTIRDGVEIGKIGEVIENTINKFGFKPISNLTG
FT                   HTIDRWVLHSGLSIPNVKGQNSHKL"
FT   tRNA            826..899
FT                   /product="tRNA-Asn"
FT                   /note="codon recognized: AAC"
FT   tRNA            907..980
FT                   /product="tRNA-Met"
FT                   /note="codon recognized: ATG"
FT   tRNA            994..1068
FT                   /product="tRNA-Glu"
FT                   /note="codon recognized: GAA"
FT   tRNA            1092..1174
FT                   /product="tRNA-Leu"
FT                   /note="codon recognized: CTA"
FT   tRNA            1191..1265
FT                   /product="tRNA-His"
FT                   /note="codon recognized: CAC"
XX
SQ   Sequence 1686 BP; 492 A; 310 C; 302 G; 582 T; 0 other;
     ttaatttatg agagttttga cccttaacat ttggaataga taatcctgaa tgtaggaccc        60
     atctatcaat agtatgccct gttaaattac tgatgggttt aaatccaaat ttatttattg       120
     tattttcaat tacttcacca attttaccta tttccacacc atctcttatt gtattaatag       180
     cattttctaa ggcagattct gcggcttcta tcattttttt atttttttct gccaattcat       240
     cgttataatt ttttaaatct tcataacctt ccacaagtac tgtagttgca gtgtctccaa       300
     tgaaaccatc tacatggacg cctatatcaa ttttgactaa atcacctggc agtattttcc       360
     tatcatcatt acatggtgga ctgtaatgtg ctgtaatttc atttactgat atattacatg       420
     ggaatgctgg ttttgcaccc attttttcta tttcattttc tataaattct gccaaatcca       480
     atattttcat ttcgcctttt acagctttaa ttgctttttt tctaactttt gatgcaattt       540
     tgccagcttt cttgaacttt tccatgataa ccactcactt aacatgcaat taaaagacat       600
     tttatccatg cttttttaca atcaaaaatt ttattatgga tataactttt catccaaaaa       660
     atcaatacta ctctagtaat ttttgttact caaaaataaa aaccataatt tgaaaattat       720
     aaattttttt acactcctta aatttataca taaaattcaa aaattttatt tgtccgaaaa       780
     ctttatatat gaaaaattca aaggtaaatt atagctaaga agaatgccgc cgtagctcag       840
     taggtaggag cgctcggctg ttaaccgagt ggtcgcaggt tcgagtcctg ccggcggcgt       900
     tattttgggc ccatagctta gccaggtaga gcgcccggct cataaccggg cggtcatggg       960
     ttcgaatccc attgggccca tttttttcct aatgctccgg tggtgtagcc cggccaatca      1020
     tttcggcctt tcgagccgaa gactcgggtt caaatcccga ccggagcata atttttttat      1080
     ttttattcat agcgggggtg cccgagtggt caaaggggac aggcttagga cctgttggcg      1140
     ttaggcttcc agggttcgaa tccctgcccc cgcatgtaag aaatcacaat ggccggggtg      1200
     gggtagttgg ccatccttcg ggactgtgga tcccgcgact cgggttcaaa tcccggccct      1260
     ggccttattt tcatccttta aaactaattt tgtggtataa tgtatagaaa aggttattgt      1320
     agagaattag atcttgtaaa tcttttttgg gataaaggtt ttgcagctct cagagtagca      1380
     ggttccggaa gttcttcaaa accattgcca gatattgtag cagggaatgg aaaaaaatat      1440
     ttagcaatag aggtaaagta cacatcaaaa gaagttctat atattaattt cagtaaaatc      1500
     gaagagtttt aattaaattt tcaaaacatt tggacctgaa gcatatatag ccagtaaaat      1560
     ttagccataa agattggctg tttttatcac caaaaagaat ctaaaagaag gactagaagt      1620
     ggtaactatc gtattgatat tgatttagca atgctgaaag gtaagttatt tgaagagatt      1680
     attggg                                                                 1686
//
spacer
spacer