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EBI DbfetchID M26930; SV 1; linear; genomic DNA; STD; INV; 4787 BP. XX AC M26930; XX DT 23-NOV-1989 (Rel. 21, Created) DT 15-FEB-1999 (Rel. 58, Last updated, Version 6) XX DE Paramecium aurelia mitochondrial photosystem II protein G (psbG), ribosomal DE proteins L2 (rpl2), S12 (rps12) S14 (rps14), and NADH dehydrogenase subunit DE 2 (ndh2) genes, complete cds. XX KW NADH dehydrogenase subunit 2; photosystem II; ribosomal protein L2; KW ribosomal protein S12; ribosomal protein S14. XX OS Paramecium aurelia OC Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Oligohymenophorea; OC Peniculida; Parameciidae; Paramecium. OG Mitochondrion XX RN [1] RP 1-4787 RX DOI; 10.1016/0378-1119(89)90320-X RX PUBMED; 2670676. RA Pritchard A.E., Venuti S.E., Ghalambor M.A., Sable C.L., Cummings D.J.; RT "An unusual region of Paramecium mitochondrial DNA containing RT chloroplast-like genes"; RL Gene 78(1):121-134(1989). XX FH Key Location/Qualifiers FH FT source 1..4787 FT /organism="Paramecium aurelia" FT /organelle="mitochondrion" FT /mol_type="genomic DNA" FT /db_xref="taxon:5889" FT CDS complement(18..323) FT /codon_start=1 FT /transl_table=4 FT /gene="rpS14" FT /product="ribosomal protein S14" FT /db_xref="GOA:P15759" FT /db_xref="InterPro:IPR018271" FT /db_xref="UniProtKB/Swiss-Prot:P15759" FT /protein_id="AAA79253.1" FT /translation="MIKLSLINIEFLKRMRYRDFEKKRKILECLKKNQNQAKQLRNHLW FT QLKVSKNNKSRLTKQVDRCCLTGRTKAYIKNFNLSRHAANLHAFEGLLQNTKTKSW" FT CDS complement(327..1529) FT /codon_start=1 FT /transl_table=4 FT /note="ORF 400" FT /db_xref="GOA:P15689" FT /db_xref="InterPro:IPR014029" FT /db_xref="UniProtKB/Swiss-Prot:P15689" FT /protein_id="AAA79254.1" FT /translation="MKAICVNFGPQHPAAHGVLRLILQLNGEVVEKMDIHIGLLHRGSE FT KLMETKPYLQSMPYFDRLDYVSMMVQEHAYCLAIEALLNTTNYTANFVLVRTMFDELTR FT ILNHMLAIACHALDIGSMSSIFWAFEEREKIMEFYERVCGRRMHAAFYRPNEVNLNFLS FT VKLLTDILEFNNNCLTTLSEMHNILTYNKIWKQRLVNIGSISYKDCLDFGLTGVMARST FT GIKRDLRMDAFDTYANYYYLNFRSYTGQAGDSYDRFLIRMNEMSESINIISQAIFKLTT FT SKNTCSPASILKALNKKKFISQTYKNEYSSMEKLITHFKYWSEGFKIQSNWTYQAVESP FT KGEFGVTLVSDGSNKPYRCKVRSPAYHHLQVLPKMSKGHLLADLSALIGTIDIVFGEID FT R" FT CDS 1535..2116 FT /codon_start=1 FT /transl_table=4 FT /transl_except=(pos:1535..1537,aa:Met) FT /gene="ndh2" FT /product="NADH dehydrogenase subunit 2" FT /note="unusual start codon" FT /db_xref="GOA:P15577" FT /db_xref="UniProtKB/Swiss-Prot:P15577" FT /protein_id="AAA79255.1" FT /translation="MRAHLLHCELAFSFGKYFYSTSFLNLLMINLMFSKLGAIFFLNLA FT LYLLALALFFFFLFNVKVALLKSVSQIYYFNNIFFFKFFVLIFFLNLAGIPPLLGFFLK FT FLIFFFLFFKTNLAFILIFLGFNMATLFFYLSTVKSFVNRKQASVLNSFNFFIRAELSF FT LYFFNFFYFFLFFAFFFLDSTFLIFLNLFF" FT CDS 2157..2576 FT /codon_start=1 FT /transl_table=4 FT /gene="rpS12" FT /product="ribosomal protein S12" FT /db_xref="GOA:P15755" FT /db_xref="InterPro:IPR005679" FT /db_xref="UniProtKB/Swiss-Prot:P15755" FT /protein_id="AAA79256.1" FT /translation="MLSTLYQNDLKKKRNRRRNRSAALVCCPQKEGSVLKPRIVTPKKP FT NSARRPVAKAKLTNKKFVVAHIPGTGHNLRKHSTILVRGGGCRDLPGVRHTCIRGVSDF FT LGVRDKTKRRSIYGIKRPPEMAKRVRRKFRAIFGQ" FT CDS 2573..3043 FT /codon_start=1 FT /transl_table=4 FT /gene="psbG" FT /product="photosystem II protein G" FT /db_xref="GOA:P15602" FT /db_xref="InterPro:IPR014406" FT /db_xref="UniProtKB/Swiss-Prot:P15602" FT /protein_id="AAA79257.1" FT /translation="MILKADFLKLSANNLISWARQGSFWPLTFGLACCALEMMHATVSR FT YDFDRFGVIFRATPRQADLIIVAGTVTNKMAPALRRLYDQTADPKWVLSMGSCANGGGY FT YHYSYAVVKGCDKIIPVDIFVPGCPPTAEALFFGVLQLQKTLMKTINEKKVF" FT CDS 3594..4373 FT /codon_start=1 FT /transl_table=4 FT /gene="rpL2" FT /product="ribosomal protein L2" FT /db_xref="GOA:P15765" FT /db_xref="InterPro:IPR005880" FT /db_xref="UniProtKB/Swiss-Prot:P15765" FT /protein_id="AAA79258.1" FT /translation="MYELKKSKKSKARFFSTTSTYFSYRKHQLFKFYIPKNPSRNNTGK FT VSMRCKRKKFKNLDLAINYARIEMGRNCLITKLSFWKEKKPYVALVRDSYNSLSYYIAP FT AGFFVGRTLKTLPTKHDYYKKGGWKFYIRGLGTYVMLRVLRVNDVIFNLLSPSRVLYRL FT ALAAGTYFKILYQSFCKTFYVMTIPSGLIIRVPSEGLAVMGRNSNTQNNKRVLGLAGVN FT FFNGTNPRVRGVAMNPVDHPNGGRTKTPKPERSPGVE" XX SQ Sequence 4787 BP; 1185 A; 1072 C; 1042 G; 1488 T; 0 other; tttaaaaagc gcttcattta tcaagatttt gtttttgtat tctggaggag gccctcgaag 60 gcgtgcagat ttgctgcatg cctgcttagg ttgaagtttt tgatgtatgc tttagtcctg 120 cctgtaaggc agcacctatc gacctgttta gtaagcctgc tcttgttgtt ttttgatacc 180 ttaagctgcc ataggtggtt ccttagctgc ttggcttgat tttggttttt ttttaagcat 240 tcgaggatct ttcttttttt ttcgaaatct ctatagcgca tcctttttaa aaattctatg 300 tttattaagc tgagcttgat tatcatttaa cgatctatct ctccaaaaac gatgtctatg 360 gttcctatta aagccgaaag gtcggctagg aggtgcccct tagacatctt aggaagcacc 420 tgaaggtggt gataagcagg ggacctgacc ttgcatctgt agggcttgtt tgagccatca 480 gaaaccaagg ttacgccgaa ctcgccctta ggggactcga cggcctggta ggttcaattg 540 ctttgaatct taaagccctc gcttcagtac ttaaagtggg ttatgagctt ctccatcgaa 600 gagtactcgt tcttgtaggt ttgggagatg aacttttttt tgtttagcgc cttgaggatg 660 cttgctgggc tacaagtatt tttacttgtt gtgagcttaa agatagcctg gcttatgatg 720 ttgatgcttt cagacatctc attcatgcga atcagaaacc tatcgtaaga atctccagcc 780 tgcccagtat agctcctaaa gtttaggtag taatagtttg cataggtgtc gaaggcgtcc 840 atcctcaggt ctctcttgat acctgtcgat cgtgccatca cccccgtcaa tccaaagtct 900 aggcaatcct tgtaggagat gcttccgatg tttacgagcc tttgcttcca aattttattg 960 tatgttaaga tgttatgcat ctctgaaaga gtcgtgaggc aattattgtt aaactcgagg 1020 atgtcagtta acagctttac ggataagaag tttaggttaa cctcgttggg cctgtaaaag 1080 gctgcgtgca tgcggcgtcc gcaaactcgc tcataaaact ccatgatttt ttctcgttct 1140 tcaaaggccc aaaaaataga tgacatgctt ccaatgtcta gtgcatggca agcaattgcg 1200 agcatgtggt tcaagatcct agttagctca tcgaacatgg ttcgaacgag cacgaagtta 1260 gctgtgtagt ttgtggtgtt taacagggct tcgattgcta agcagtaagc atgctcctgc 1320 accatcatcg atacgtaatc caacctatca aagtagggca ttgactgcag gtagggcttt 1380 gtctccatta gcttttctga ccccctgtga aggagcccga tgtggatgtc catcttttct 1440 acaacctccc cgtttagctg aaggatcagc ctaaggacgc cgtgagcagc tgggtgttga 1500 gggccgaaat ttacgcagat ggcctttatg ttttttgaga gctcatttgc ttcattgtga 1560 gttggctttc agttttggaa aatacttcta ttcaacaagt tttttgaatc tccttatgat 1620 aaatcttatg ttttcgaaac tcggggctat tttctttcta aacttggccc tctatctctt 1680 agccctggcc ctcttttttt tttttctgtt taacgtcaag gtcgcgctcc ttaagagcgt 1740 ttcgcaaatc tactacttta acaacatctt tttctttaag ttcttcgttc ttatattttt 1800 cctaaacctc gcaggcatac ccccgcttct tgggtttttt ctaaagtttt taattttttt 1860 ttttttattc tttaaaacaa acctagcctt catccttatt ttcttaggat ttaacatggc 1920 cacgctcttc ttttatctaa gcaccgtaaa gtcctttgta aataggaagc aggcctccgt 1980 actaaactcc tttaattttt ttataagagc tgaacttagc ttcctttatt tttttaattt 2040 tttttacttt ttcctattct ttgctttttt tttcttagac tcgaccttcc taattttttt 2100 aaatttattt ttttaggcat cttttccttc atgatagata ataatttttt tattttattt 2160 tgtcaacgtt gtatcaaaac gatctaaaga agaagagaaa caggcgaagg aataggagtg 2220 cggccctggt ttgctgcccc caaaaagagg gtagcgtctt aaagccaagg atcgtaaccc 2280 ccaagaagcc aaattctgca cgtaggccgg tagccaaggc caaactcaca aataagaagt 2340 tcgttgtagc tcatatccca ggaacgggcc acaacctacg caaacattct accattttag 2400 ttcgcggagg gggctgcagg gaccttcccg gtgtaaggca tacttgcatt cggggtgttt 2460 cggacttctt aggtgtgcga gacaagacta agcgcaggtc catctatggt ataaagaggc 2520 cccccgagat ggctaagcgc gtacgaagga agtttagggc catctttggg caataatttt 2580 gaaggctgat tttttaaagt tatctgctaa taacttaatc tcctgggctc ggcaagggtc 2640 tttttggccc ctaacctttg ggctcgcctg ctgtgcccta gagatgatgc atgcaactgt 2700 tagccgctac gactttgatc gctttggggt gatatttaga gcaacccccc gccaagccga 2760 cctgatcatc gttgcaggaa cggtaacgaa taaaatggcc cccgccctac gaaggctcta 2820 tgaccagacg gccgacccaa agtgggtgtt gtccatgggc agctgcgcta acggaggggg 2880 ctactaccac tactcttatg ccgttgtgaa ggggtgcgat aagatcatcc ccgtcgatat 2940 ctttgtccca gggtgcccac ccacggccga agctcttttt tttggagttt tgcaacttca 3000 aaaaaccttg atgaagacca taaatgaaaa gaaagtattc tagtattcgc cgagccttta 3060 ttgaacttga cagagtgaaa gggtgctttt ttagacgagg aaaaaggaag gcaaagaagc 3120 ttaattccag cggtgctttt gcttttggaa gctcctatgc tggtacctac ttgctggata 3180 agcactctcg tagaaaaaac aacctctacc tcaggtcttt tttttttttt aagttttatt 3240 attgcaacct ctttaacttt aatcctggct ttattggcgc attttaccat acgcgccccg 3300 gggtcttttt tctcgaccac ttttttttct ttaataactt tttagagata ccctcgtttt 3360 ttgagaatgc tgctgaagca gagccagccc agctaatggg ccacctcgta caagactgcg 3420 ctgcccagac gacaggccgc gggcttgtaa actttgagcg ggggctcgtg gactccaaac 3480 ctaaattctt ggacgctttt tttgggcttt tgagcctaaa gcgaacaaca aacaggtttg 3540 gcatcctttt tttcttaatt ttttgcctac gccgggccta atttaacttt aacgtgtacg 3600 agttaaaaaa aagtaaaaaa tcgaaggctc gattcttttc aacaacttca acctatttct 3660 cataccgaaa gcaccagctc tttaaatttt acataccaaa gaaccctagt aggaacaata 3720 cgggcaaggt cagcatgcga tgcaagcgca agaagtttaa aaacctcgac ctcgctatca 3780 attatgcgcg cattgaaatg ggccgtaact gcctcataac caagctctct ttttggaagg 3840 aaaaaaaacc ctacgttgcc ctcgtcaggg actcttataa ctcactatcc tactacatcg 3900 cccccgccgg tttttttgtt ggtaggaccc tcaagacgct acctaccaag catgactact 3960 acaaaaaggg gggctggaag ttctatattc gtggcctcgg aacctacgtc atgctgaggg 4020 tcttaagggt taacgacgtt atttttaacc ttctctcccc ctcgagggtc ctctataggt 4080 tagctttagc ggccggaaca tactttaaga tcctttatca gagcttctgc aaaaccttct 4140 acgtaatgac catcccctcg ggactcatta tacgagtacc ctccgagggc ctggccgtca 4200 tgggccgaaa ttcgaatacc caaaataaca agagagtcct tgggctcgct ggagttaact 4260 tctttaacgg aactaatccc cgcgtaaggg gggtagcaat gaaccccgtg gaccatccaa 4320 acggggggcg taccaagact cctaaacctg agcgctcccc tggggttgag tagcgaagat 4380 taagaaataa ggagagtagc ttttgtctag atctgcttga aagggctttg ttttttgtaa 4440 gagcacgaag cgcgccctgc tcgagggcac tttggcaggg gagaaggttt tgagcttctt 4500 cttacttaga agctcccaca tcctcccaca cttctgggac gtcggcttaa aggtccacaa 4560 cggtaggttc ctaaagaagg cgcgctcggg cgagctcgta gtctgtagaa aagctggaga 4620 gtttgctttc tcacgaaaac cttatttttt tcccataaaa aaaaaataga tagaatagct 4680 cttgggtcaa agcagtactt tcttacctga taggcagggc gtttttcaat tttggaacga 4740 tgtttgagat tccaaggaat cttttcaaaa gtctaacggc gagatct 4787 // |
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