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EBI DbfetchID M26414; SV 1; linear; genomic DNA; STD; PRO; 3185 BP. XX AC M26414; XX DT 23-NOV-1989 (Rel. 21, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 7) XX DE Bacillus subtilis initiation factor 1 (infA), ribosomal protein B (rpmJ), DE ribosomal protein S13 (rpsM), ribosomal protein S11 (rpsK), RNA polymerase DE alpha-core-subunit (rpoA), and ribosomal protein L17 (rplQ) genes, complete DE cds; and unknown gene. XX KW . XX OS Bacillus subtilis OC Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus. XX RN [1] RP 1-3185 RX PUBMED; 2496109. RA Boylan S.A., Suh J.W., Thomas S.M., Price C.W.; RT "Gene encoding the alpha core subunit of Bacillus subtilis RNA polymerase RT is cotranscribed with the genes for initiation factor 1 and ribosomal RT proteins B, S13, S11, and L17"; RL J. Bacteriol. 171(5):2553-2562(1989). XX RN [2] RP 1-3185 RA Boylan S.A., Suh J.W., Thomas S.M., Price C.W.; RT ; RL Submitted (30-JAN-1992) to the EMBL/GenBank/DDBJ databases. RL Department of Food Science and Technology, University of California-Davis, RL Davis, CA 95616, USA XX FH Key Location/Qualifiers FH FT source 1..3185 FT /organism="Bacillus subtilis" FT /map="12 degrees" FT /mol_type="genomic DNA" FT /db_xref="taxon:1423" FT RBS 216..225 FT /gene="infA" FT CDS 235..453 FT /codon_start=1 FT /transl_table=11 FT /gene="infA" FT /product="initiation factor 1" FT /db_xref="GOA:P20458" FT /db_xref="HSSP:1AH9" FT /db_xref="InterPro:IPR004368" FT /db_xref="UniProtKB/Swiss-Prot:P20458" FT /protein_id="AAA22213.1" FT /translation="MAKDDVIEVEGTIVETLPNAMFKVELENGHTVLAHVSGKIRMHFI FT RILPGDKVTVELSPYDLTRGRITYRYK" FT RBS 470..477 FT /gene="rpmJ" FT CDS 487..600 FT /codon_start=1 FT /transl_table=11 FT /gene="rpmJ" FT /product="ribosomal protein B" FT /db_xref="GOA:P20278" FT /db_xref="HSSP:1DFE" FT /db_xref="InterPro:IPR000473" FT /db_xref="UniProtKB/Swiss-Prot:P20278" FT /protein_id="AAA22214.1" FT /translation="MKVRPSVKPICEKCKVIRRKGKVMVICENPKHKQKQG" FT RBS 606..613 FT /gene="rpsM" FT CDS 623..988 FT /codon_start=1 FT /transl_table=11 FT /gene="rpsM" FT /product="ribosomal protein S13" FT /db_xref="GOA:P20282" FT /db_xref="InterPro:IPR018269" FT /db_xref="UniProtKB/Swiss-Prot:P20282" FT /protein_id="AAA22215.1" FT /translation="MARIAGVDIPRDKRVVISLTYIFGIGRTTAQQVLKEAGVSEDTRV FT RDLTEEELGKIRDIIDKLKVEGDLRREVSLNIKRLIEIGTYRGIRHRRGLPVRGQNSKN FT NARTRKGPRRTVANKKK" FT RBS 988..999 FT /gene="rpsK" FT CDS 1009..1404 FT /codon_start=1 FT /transl_table=11 FT /gene="rpsK" FT /product="ribosomal protein S11" FT /db_xref="GOA:P04969" FT /db_xref="InterPro:IPR018102" FT /db_xref="UniProtKB/Swiss-Prot:P04969" FT /protein_id="AAA22216.1" FT /translation="MAAARKSNTRKRRVKKNIESGIAHIRSTFNNTIVTITDTHGNAIS FT WSSAGALGFRGSRKSTPFAAQMAAETAAKGSIEHGLKTLEVTVKGPGSGREAAIRALQA FT AGLEVTAIRDVTPVPHNGCRPPKRRRV" FT terminator 1396..1476 FT /gene="rpsK" FT terminator 1515..1552 FT RBS 1564..1571 FT /gene="rpoA" FT CDS 1581..2525 FT /codon_start=1 FT /transl_table=11 FT /gene="rpoA" FT /product="RNA polymerase alpha-core-subunit" FT /db_xref="GOA:P20429" FT /db_xref="InterPro:IPR011773" FT /db_xref="PDB:1Z3E" FT /db_xref="UniProtKB/Swiss-Prot:P20429" FT /protein_id="AAA22217.1" FT /translation="MIEIEKPKIETVEISDDAKFGKFVVEPLERGYGTTLGNSLRRILL FT SSLPGAAVTSIQIDGVLHEFSTIEGVVEDVTTIILHIKKLALKIYSDEEKTLEIDVQGE FT GTVTAADITHDSDVEILNPDLHIATLGENASFRVRLTAQRGRGYTPADANKRDDQPIGV FT IPIDSIYTPVSRVSYQVENTRVGQVANYDKLTLDVWTDGSTGPKEAIALGSKILTEHLN FT IFVGLTDEAQHAEIMVEKEEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELANKT FT EEDMMKVRNLGRKSLEEVKAKLEELGLGLRKDD" FT RBS 2586..2595 FT /gene="rplQ" FT CDS 2603..2965 FT /codon_start=1 FT /transl_table=11 FT /gene="rplQ" FT /product="ribosomal protein L17" FT /db_xref="GOA:P20277" FT /db_xref="HSSP:1GD8" FT /db_xref="InterPro:IPR000456" FT /db_xref="UniProtKB/Swiss-Prot:P20277" FT /protein_id="AAA22218.1" FT /translation="MSYRKLGRTSAQRKAMLRDLTTDLIINERIETTETRAKELRSVVE FT KMITLGKRGDLHARRQAAAYIRNEVANEENNQDALQKLFSDIATRYEERQGGYTRIMKL FT GPRRGDGAPMAIIELV" FT terminator 2980..3035 FT /gene="rplQ" FT RBS 3074..3082 FT CDS 3093..>3185 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /db_xref="GOA:P40735" FT /db_xref="HSSP:1JJ7" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/Swiss-Prot:P40735" FT /protein_id="AAA22219.1" FT /translation="MNQNQLISVEDIVFRYRKDAERRALDGVSLQ" XX SQ Sequence 3185 BP; 1011 A; 613 C; 720 G; 841 T; 0 other; gaattcatct tgcttcttgt cgttggaatt ttaaccatca tcaatgtact aacagcagac 60 ggagaaaagc gtacatttca ttctcctaag aaaaagaata tcaatcattt aaccctttat 120 gattgcgtat ctccggaagt tcagaacagt ataaacgaaa cagggcgtgt gacaaacttc 180 ttttgaaatt tgtcagaaag caagttactg atttgaagaa gggagaacac ttgaatggcg 240 aaagacgatg taattgaagt ggaaggtact atagtcgaaa cactgccaaa cgcgatgttc 300 aaagttgaac ttgaaaatgg ccacactgtt ttggctcatg tatctggtaa aatccgcatg 360 cacttcattc gcattttacc tggagacaaa gttacggtag aattatctcc atatgactta 420 actcgtggca ggattacgta ccgttacaaa taaagcactc cggaaactga aggaggttgg 480 aaacacatga aagtgagacc atcagttaaa ccaatctgcg aaaaatgtaa agttattcgc 540 agaaaaggaa aagtaatggt gatctgtgaa aatccaaagc ataaacaaaa acaaggataa 600 tttataagga ggtgcccaga gaatggctcg tattgctggt gtagatatcc cacgtgacaa 660 acgtgttgtt atttctttaa catacatctt cggaattggc cgcacaacgg ctcagcaagt 720 tttaaaagaa gctggagttt cagaagatac tcgtgtgcgc gatcttactg aagaagaact 780 tggtaaaatc cgtgatatta ttgacaaact gaaagtagaa ggtgaccttc gccgtgaagt 840 ttctcttaat atcaaacgtc tgatcgaaat cggaacgtac cgcggaatcc gtcatcgcag 900 aggattacct gttcgcggac aaaactctaa aaacaacgcg cgtactcgta aaggtccgcg 960 tcgtactgta gctaacaaga aaaaataagt aagggaggtt cttaaacaat ggctgctgct 1020 cgtaaatcta acacgcgtaa acgtcgcgtg aaaaagaata ttgagtctgg aattgctcat 1080 attcgttcaa ctttcaataa cacgatcgtt acgatcactg acactcatgg taatgctatt 1140 tcttggtcta gtgccggagc tttaggattc agaggttctc gtaaatctac tccttttgct 1200 gcgcaaatgg ctgcagaaac agctgctaaa ggttcaatcg aacatggtct taaaactcta 1260 gaggttactg ttaaaggacc tggttcaggc cgtgaagctg caatccgtgc acttcaagct 1320 gctggactag aagtcactgc tatcagagac gtaactcctg ttcctcataa cggatgccgt 1380 ccaccaaaac gtcgccgcgt gtaatttgtt tgtatagatt ttgtgtccct gtcaataatg 1440 ggttatgata cagttattta tgaaacgaat gcaccgactc gttgcctgag cacatacggg 1500 actaaacaat ggggaatttc ggatggaatc tcatatgatt ctattcgagg tttcgacgtt 1560 ttgaaggagg gttttaagta atgatcgaga ttgaaaaacc aaaaatcgaa acggttgaaa 1620 tcagcgacga tgccaaattt ggtaagtttg tcgtagagcc acttgagcgt ggatatggta 1680 caactctggg taactcctta cgtcgtatcc tcttatcctc actccctggt gccgctgtaa 1740 catcaatcca gatagatggt gtactgcacg aattctcgac aattgaaggc gttgtggaag 1800 atgttacaac gattatctta cacattaaaa agcttgcatt gaaaatctac tctgatgaag 1860 agaagacgct agaaattgat gtacagggtg aaggaactgt aacggcagct gatattacac 1920 acgatagtga tgtagagatc ttaaatcctg atcttcatat cgcgactctt ggtgagaatg 1980 cgagtttccg agttcgcctt actgctcaaa gaggacgtgg gtatacgcct gctgacgcaa 2040 acaagagaga cgatcagcca atcggcgtga ttccgatcga ttctatctat acgccagttt 2100 ctcgtgtatc ttatcaggta gagaacactc gtgtaggcca agttgcaaac tatgataaac 2160 ttacacttga tgtttggact gatggaagca ctggaccgaa agaagcaatt gcgcttggtt 2220 caaagatttt aactgaacac cttaatatat tcgttggttt aactgacgaa gctcaacatg 2280 ctgaaatcat ggttgaaaaa gaagaagatc aaaaagagaa agttcttgaa atgacaattg 2340 aagaattgga tctttctgtt cgttcttaca actgcttaaa gcgtgcgggt attaacacgg 2400 ttcaagagct tgcgaacaag acggaagaag atatgatgaa agttcgaaat ctaggacgca 2460 aatcacttga agaagtgaaa gcgaaactag aagaacttgg actcggactt cgcaaagacg 2520 attgactagt ttcccttgtg aactaggatt ttcgtgtgtt tattattcag aaacagcatt 2580 ccaataaagg aggggacatc acatgtcata cagaaaacta ggacgtacga gtgcacagcg 2640 taaagctatg cttcgtgatc ttacaactga tttgatcatc aacgaaagaa tcgaaacaac 2700 tgaaacacgt gcgaaagaac ttcgctctgt agttgaaaaa atgatcacgc ttggcaaacg 2760 cggtgatctt cacgctcgcc gtcaagctgc tgcatacatc cgcaacgagg ttgcaaacga 2820 agaaaataat caagatgcac ttcaaaaatt attctctgac attgcaactc gttacgagga 2880 gcgccaaggt ggatacacac gtattatgaa gcttggtcct cgccgtggtg acggagcacc 2940 aatggcaatt atcgaattgg tttaatcaca tatttttgtg tatctaaaga agggcgggac 3000 agtttctaac tggatctatg cccttttttt agatactgca acttttaata gagagaaaag 3060 cagagcatta gctgagagga ggccggtttt ccatgaatca aaatcagttg atatcggtag 3120 aggatatcgt atttcgatat cggaaggacg cagaaagacg agcactagac ggcgtctccc 3180 tgcag 3185 // |
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