EBI Dbfetch

ID   M24717; SV 1; linear; genomic RNA; STD; VRL; 2002 BP.
XX
AC   M24717; J04420;
XX
DT   23-NOV-1989 (Rel. 21, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 6)
XX
DE   Newcastle disease virus IBA/85 hemagglutinin-neuraminidase gene, complete
DE   cds.
XX
KW   haemagglutinin; neuraminidase.
XX
OS   Newcastle disease virus
OC   Viruses; ssRNA negative-strand viruses; Mononegavirales; Paramyxoviridae;
OC   Paramyxovirinae; Avulavirus.
XX
RN   [1]
RP   1-2002
RX   DOI; 10.1016/0042-6822(89)90151-7
RX   PUBMED; 2705297.
RA   Sakaguchi T., Toyoda T., Gotoh B., Inocencio N.M., Kuma K., Miyata T.,
RA   Nagai Y.;
RT   "Newcastle disease virus evolution. I. Multiple lineages defined by
RT   sequence variability of the hemagglutinin-neuraminidase gene";
RL   Virology 169(2):260-272(1989).
XX
CC   Draft entry and computer-readable sequence for [1] kindly provided
CC   by Y.Nagai, 15-DEC-1988.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2002
FT                   /organism="Newcastle disease virus"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:11176"
FT   CDS             92..1807
FT                   /codon_start=1
FT                   /note="hemagglutinin-neuraminidase"
FT                   /db_xref="GOA:P35742"
FT                   /db_xref="InterPro:IPR000665"
FT                   /db_xref="InterPro:IPR011040"
FT                   /db_xref="InterPro:IPR016285"
FT                   /db_xref="UniProtKB/Swiss-Prot:P35742"
FT                   /protein_id="AAA46667.1"
FT                   /translation="MDRAVSRVVLENEEREAKNTWRFVFRIAVLLLIVMTLAISAAALV
FT                   YSMGASTPRDLASISTAISKMEDKITSSLSSNQDVVDRIYKQVALESPLALLNTESIIM
FT                   NAITSLSYQINGAANNSGCGAPVHDPDYIGGIGKELIVDDTSDVTSFYPSAYQEHLNFI
FT                   PAPTTGSGCTRIPSFDMSATHYCYTHNVILSGCRDHSHSHQYLALGVLRTSATGKVFFS
FT                   TLRSINLDDTQNRKSCSVSATPLGCDMLCSKVTETEEEDYKSVTPTSMVHGRFRFDGQY
FT                   HEKDSDRTTLFKDWVANYPGVGGGSFIDDRVWFPIYGGLKPNSPSDIAQEGKYVIYKRY
FT                   NNTFPDKQDYQIRMAKSSYKPGRFGGKRVQQAILSIKVSTSLGEDPVLTVPPNTITLMG
FT                   AEGRVLTVGTSHFLYQRGSSYFSPALLYPMTVYQQTATLHSPYTFNAFTRPGSVPCQAS
FT                   ARCPNSCITGVYTDPYPLVFHRNHTLRGVFGTMLDDEQARLNPVSAVFDNISRSRVTRV
FT                   SSSSTKAAYTTSTCFKVVKTSKAYCLSIAEISNTLFGEFRIVPLLVEILKDDRV"
XX
SQ   Sequence 2002 BP; 566 A; 461 C; 450 G; 525 T; 0 other;
     acgggtagaa cggtcggaga ggccacccct caatcgggag tcggacccca caacgtccgt        60
     tctaccgcac taccaatagc agatttcagt catggaccgt gcagttagca gagttgtgct       120
     agagaatgaa gaaagagagg caaagaacac atggcgcttt gttttccgga ttgcagtctt       180
     acttttaata gtaatgacct tagctatctc tgcagctgcc ctggtataca gcatgggggc       240
     tagtacgccg cgcgatctcg caagcatatc aactgcgatc tctaagatgg aagacaagat       300
     tacgtcttca ctcagttcaa atcaagacgt agtagatagg atatataagc aggtggccct       360
     tgaatctccg ctggcactgc taaacactga atctataatt atgaatgcaa taacgtctct       420
     ctcttatcaa attaacgggg ctgcgaataa tagcggttgt ggggcgcctg ttcatgaccc       480
     agattatatc ggggggatag gcaaagaact catagtagac gacactagtg atgtcacatc       540
     attctatcct tctgcatacc aagaacacct gaattttatc ccggcgccta ccacaggatc       600
     aggttgcact cggataccct catttgatat gagtgctacc cactactgtt atactcacaa       660
     tgtgatattg tctggttgca gagatcactc acattcacat caatacttag cacttggtgt       720
     gcttcggaca tctgcaacag ggaaggtatt cttttctact ctgcgttcca tcaatttaga       780
     cgacacccaa aatcggaagt cctgcagtgt gagtgcaact cctttaggtt gtgacatgct       840
     gtgttctaaa gtcacagaga ctgaggaaga ggattataag tcagttaccc ctacatcgat       900
     ggtgcatggg aggttcaggt ttgacggtca ataccatgag aaggattcag ataggacaac       960
     attatttaag gattgggtgg caaattaccc aggagtggga ggtgggtctt ttattgacga      1020
     ccgtgtatgg ttcccaattt acggagggct aaaacctaat tcgcctagcg acattgcaca      1080
     agaagggaaa tatgtaatat acaagcgcta taataacaca ttcccggata aacaagatta      1140
     ccagatccgg atggctaaat cttcgtataa gcctgggcgg ttcggtggga agcgcgtaca      1200
     gcaagccatc ttatccatca aagtgtcaac atctttgggt gaggacccgg tgttgactgt      1260
     tccgcctaac acaattacac tcatgggggc cgaaggaaga gttctcacag tagggacatc      1320
     tcatttctta taccagcgag ggtcttcata tttctctcct gctttattat atcctatgac      1380
     agtctatcaa caaacagcta ctcttcatag cccttacaca tttaatgctt tcactcggcc      1440
     aggtagtgtc ccttgtcagg catcagcaag atgccccaac tcatgtatca ctggggtcta      1500
     cactgatccg tatcctctag tcttccatag gaatcatacc ctgcgagggg tcttcgggac      1560
     aatgcttgat gatgaacaag caagactcaa ccccgtatct gcagtattcg acaacatatc      1620
     ccgcagtcgt gtaacccggg taagttcaag cagtactaag gcagcataca caacatcgac      1680
     atgttttaaa gttgtcaaga ccagtaaagc ttactgtctt agcattgcag aaatatccaa      1740
     taccctattc ggggaattca ggatcgttcc tttactagtt gagattctta aggatgatag      1800
     ggtttaagaa actagatctg gctggttgag tcgaacacag gattgctggg aggatgatgc      1860
     tgtatcacct atctctcaca actccaaaga tcaaaatgga tatcaatgca agcccgaatc      1920
     ccatactgcc gggcagctac aacctgacaa tgctgatgtg gtcagtctca atcttgtcca      1980
     tagccacttt attaagaaaa aa                                               2002
//