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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   M24716; SV 1; linear; genomic RNA; STD; VRL; 2002 BP.
XX
AC   M24716; J04420;
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DT   23-NOV-1989 (Rel. 21, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 6)
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DE   Newcastle disease virus CHI/85 hemagglutinin-neuraminidase gene, complete
DE   cds.
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KW   haemagglutinin; neuraminidase.
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OS   Newcastle disease virus
OC   Viruses; ssRNA negative-strand viruses; Mononegavirales; Paramyxoviridae;
OC   Paramyxovirinae; Avulavirus.
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RN   [1]
RP   1-2002
RX   DOI; 10.1016/0042-6822(89)90151-7
RX   PUBMED; 2705297.
RA   Sakaguchi T., Toyoda T., Gotoh B., Inocencio N.M., Kuma K., Miyata T.,
RA   Nagai Y.;
RT   "Newcastle disease virus evolution. I. Multiple lineages defined by
RT   sequence variability of the hemagglutinin-neuraminidase gene";
RL   Virology 169(2):260-272(1989).
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CC   Draft entry and computer-readable sequence for [1] kindly provided
CC   by Y.Nagai, 15-DEC-1988.
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FH   Key             Location/Qualifiers
FH
FT   source          1..2002
FT                   /organism="Newcastle disease virus"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:11176"
FT   CDS             92..1807
FT                   /codon_start=1
FT                   /note="hemagglutinin-neuraminidase"
FT                   /db_xref="GOA:P35740"
FT                   /db_xref="InterPro:IPR000665"
FT                   /db_xref="UniProtKB/Swiss-Prot:P35740"
FT                   /protein_id="AAA46666.1"
FT                   /translation="MDRAVNRVVLENEEREAKNTWRLVFRIAVLLLMVMTLAISAAALV
FT                   YSMGASTPRDLAGISTVISKTEDKVTSLLSSKQDVIDRIYKQVALESPLALLNTESIIM
FT                   NAITSLSYQINGAANNSGCGEPVHDPDYIGGIGKELIVDDISDVTSFYPSAYQEHLNFI
FT                   PAPTTGSGCTRIPSFDMSTTHYCYTHNVILSGCRDHSHSHQYLALGVLRTSATGRVFFS
FT                   TLRSINLDDTQNRKSCSVSATPLGCDMLCSKVTETEEEDYKSVTPTSMVHGRLGFDGQY
FT                   HEKDLDTTVLFKDWVANYPGVGGGSFIDDRVWFPVYGGLKPNSPSDTAQEGKYVIYKRY
FT                   NNTCPDEQDYQIRMAKSSYKPGRFGGKRVQQAILSIKVSTSLGEDPVLTIPPNTITLMG
FT                   AEGRVLTVGTSHFLYQRGSSYFSPALLYPMTVNNKTATLHSPYTFNAFTRPGSVPCQAS
FT                   ARCPNSCITGVYTDPYPLIFHRNHTLRGVFGTMLDDEQARLNPVSAVFDNISRSRVTRV
FT                   SSSSTKAAYTTSTCFKVVKTNKAYCLSIAEISNTLFGEFRIVPLLVEILKDDRV"
XX
SQ   Sequence 2002 BP; 571 A; 480 C; 447 G; 504 T; 0 other;
     acgggtagaa cggtcagagg agccaccctt caatcgaaag ttaggcctca caacatccgt        60
     tctaccacat caccaacaac aggagtcagt catggaccgc gcggttaaca gagtcgtgct       120
     agagaatgag gaaagagaag caaagaacac atggcgcttg gttttccgga tcgcagtctt       180
     acttttaatg gtaatgactc tagctatctc cgcagctgcc ctggtatata gcatgggggc       240
     cagtacgccg cgtgacctcg caggcatatc gactgtgatc tccaagacag aggataaggt       300
     tacgtcttta ctcagttcca agcaagatgt gatagatagg atatataagc aggtggccct       360
     tgaatctccg ctggcgctac taaacactga atctataatt atgaatgcaa taacctctct       420
     ctcctatcaa atcaacgggg ctgcgaataa tagcgggtgt ggggagcctg ttcatgaccc       480
     agattatatc ggggggatag gcaaagaact catagtggac gacattagtg atgtcacatc       540
     attttatcct tctgcatatc aagaacactt gaatttcatc ccggcgccta ctacaggatc       600
     cggttgcact cggataccct catttgacat gagcaccact cactactgtt atactcacaa       660
     tgtgatatta tctggttgca gagatcactc acactcacat caatacttag cacttggtgt       720
     gcttcggaca tctgcaacag ggagggtatt cttttctact ctgcgttcca taaatttaga       780
     tgacacccaa aatcggaagt cctgcagtgt gagtgcaacc cctttaggtt gtgatatgct       840
     gtgctctaaa gtcacagaga ctgaggaaga ggattacaag tcagttaccc ccacatcaat       900
     ggtgcacgga aggctagggt ttgacggtca ataccatgag aaggacttgg acaccacagt       960
     cttatttaag gattgggtgg caaattaccc aggggtggga ggagggtctt ttattgacga      1020
     ccgtgtatgg ttcccagttt acggagggct caaacccaat tcacccagtg acactgcaca      1080
     agaagggaaa tatgtaatat acaagcgcta taataacaca tgccccgatg aacaagatta      1140
     ccaaattcgg atggctaagt cttcatataa acctgggcga tttggtggaa agcgcgtaca      1200
     gcaggccatc ttatctatca aagtgtcaac atctttgggt gaggacccgg tgctgactat      1260
     tccacctaat acaattacac tcatgggggc tgaaggcaga gttctcacag tagggacatc      1320
     tcacttcttg taccaacgag ggtcttcata tttctcccct gctttattat accccatgac      1380
     agtaaataac aaaacagcta ctcttcatag tccttatacg tttaatgcct tcactcggcc      1440
     aggtagtgtc ccttgccagg catcagcaag atgccccaac tcatgcatca ctggagtcta      1500
     tactgatcca tatcccttaa tcttccatag gaatcatacc ctacgagggg tcttcgggac      1560
     gatgcttgat gatgaacaag caagacttaa ccccgtatct gcagtattcg acaacatatc      1620
     ccgcagtcgt gtaacccggg tgagttcaag cagcaccaag gcagcataca cgacatcgac      1680
     atgttttaaa gttgtcaaga ccaataaagc ttattgtctt agtattgcag aaatatccaa      1740
     taccctcttc ggggaattta ggatcgttcc cttactagtt gagatcctca aggatgatag      1800
     ggtttaagaa gctagacttg gccgaccgag tcaaccatag gacggttggg aagacgactc      1860
     cgcaccaatc atctcccacg atgcctagag tcaagctgaa tattaacata agccaggatt      1920
     ccatgctgtt gggcagccac aatccgacaa tgctgacatg attattctcg actccgtcca      1980
     catgcacttt attaagaaaa aa                                               2002
//
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