EBI Dbfetch

ID   M24714; SV 1; linear; genomic RNA; STD; VRL; 2002 BP.
XX
AC   M24714; J04420;
XX
DT   23-NOV-1989 (Rel. 21, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 6)
XX
DE   Newcastle disease virus HER/33 hemagglutinin-neuraminidase gene, complete
DE   cds.
XX
KW   haemagglutinin; neuraminidase.
XX
OS   Newcastle disease virus
OC   Viruses; ssRNA negative-strand viruses; Mononegavirales; Paramyxoviridae;
OC   Paramyxovirinae; Avulavirus.
XX
RN   [1]
RP   1-2002
RX   DOI; 10.1016/0042-6822(89)90151-7
RX   PUBMED; 2705297.
RA   Sakaguchi T., Toyoda T., Gotoh B., Inocencio N.M., Kuma K., Miyata T.,
RA   Nagai Y.;
RT   "Newcastle disease virus evolution. I. Multiple lineages defined by
RT   sequence variability of the hemagglutinin-neuraminidase gene";
RL   Virology 169(2):260-272(1989).
XX
CC   Draft entry and computer-readable sequence for [1] kindly provided
CC   by Y.Nagai, 15-DEC-1988.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2002
FT                   /organism="Newcastle disease virus"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:11176"
FT   CDS             92..1807
FT                   /codon_start=1
FT                   /note="hemagglutinin-neuraminidase"
FT                   /db_xref="GOA:P35741"
FT                   /db_xref="InterPro:IPR000665"
FT                   /db_xref="InterPro:IPR011040"
FT                   /db_xref="InterPro:IPR016285"
FT                   /db_xref="UniProtKB/Swiss-Prot:P35741"
FT                   /protein_id="AAA46664.1"
FT                   /translation="MDRAVSRVALENEEREAKNTWRFVFRIAILLLIVITLAISAAALV
FT                   YSMEASTPGDLVGIPTVISRAEEKITSALSSNQDVVDRIYKQVALESPLALLNTESVIM
FT                   NAITSLSYQINGAANNSGCGAPVHDPDYIGGIGKELIVDDASDVTSFYPSAFQEHLNFI
FT                   PAPTTGSGCTRIPSFDISATHYCYTHNVILSGCRDHSHSHQYLALGVLRTSATGRVFFS
FT                   TLRSINLDDNQNRKSCSVSATPLGCDMLCSKITETEEEDYSSVSPTSMVHGRLGFDGQY
FT                   HEKDLDVITLFKDWVANYPGVGGGSFIDNRVWFPVYGGLKPNSPSDTVQEGRYVIYKRY
FT                   NDTCPDEQDYQIRMAKSSYKPGRFGGKRVQQAILSIKVSTSLGEDPVLTIPPNTVTLMG
FT                   AEGRVLTVGTSHFLYQRGSSYFSPALLYPMTVNNKTATLHSPYTFNAFTRPGSVPCQAS
FT                   ARCPNSCVTGVYTDPYPLIFHRNHTLRGVFGTMLDDGQARLNPVSAVFDNISRSRITRV
FT                   SSSRTKAAYTTSTCFKVVKTNKTYVLSIAEISNTLFGEFRIVPLLVEILKNDGV"
XX
SQ   Sequence 2002 BP; 568 A; 453 C; 456 G; 525 T; 0 other;
     acgggtagaa cggtcgggga agccatccct caatcgggaa tcaggtctca taacgtcctt        60
     tctaccgcat caccaatagc aaacttcggt tatggaccgt gcagttagca gagttgcgct       120
     agagaatgaa gaaagagaag caaagaatac atggcgcttt gtattccgga tcgcaatctt       180
     acttttaata gtaataacct tagccatctc tgcagccgcc ctggtatata gcatggaggc       240
     tagcacgccg ggcgaccttg ttggcatacc aactgtgatc tctagggcag aggaaaagat       300
     tacatctgca ctcagttcta atcaagatgt agtagatagg atatataagc aggtggccct       360
     tgagtctcca ttggcgttgc taaacaccga atctgtaatt atgaatgcaa taacgtctct       420
     ctcttatcaa atcaatggag ctgcaaataa tagcgggtgt ggggcacctg ttcatgaccc       480
     agattacatc ggggggatag gcaaagaact tattgtagat gacgctagtg atgtcacatc       540
     attctatccc tctgcgttcc aagaacacct gaattttatc ccggcaccca ctacaggatc       600
     aggttgcact cggataccct cattcgacat aagtgctacc cactactgtt acactcacaa       660
     tgtgatatta tctggttgca gagatcactc acactcacat cagtacttag cacttggtgt       720
     gcttcggaca tctgcaacag ggagggtatt cttttctact ctgcgttcca tcaatttgga       780
     tgacaaccaa aatcggaagt cttgcagtgt gagtgcaacc cccttaggtt gtgatatgct       840
     gtgctctaaa atcacagaga ctgaggaaga agattatagt tcagttagcc ccacatcgat       900
     ggtgcatgga aggttagggt ttgacggtca ataccatgag aaggacctag acgtcataac       960
     tttatttaaa gattgggtgg caaattaccc aggagtgggg ggtgggtctt ttattgacaa      1020
     ccgcgtgtgg ttcccagtct atggagggct aaaacccaat tcgcctagcg acaccgtaca      1080
     agaagggaga tatgtaatat acaagcgcta caatgacaca tgcccagatg aacaagatta      1140
     ccagattcgg atggctaagt cttcgtataa gcctgggcgg tttggtggaa aacgcgtaca      1200
     gcaagccatc ttatctatca aggtgtcaac atctttgggc gaggacccgg tgctgactat      1260
     accgcctaat acagtcacac tcatgggggc cgaaggcaga gttctcacag taggtacatc      1320
     tcatttcttg taccagcgag ggtcttcata tttctctccc gctttattat accctatgac      1380
     agtcaacaac aaaacggcta ctcttcatag tccttacaca ttcaatgctt tcactcggcc      1440
     aggtagtgtg ccttgccagg catcagcaag atgcccaaac tcatgtgtca ctggagttta      1500
     tactgatccg tatcccttaa tcttccatag gaaccacacc ttgcgggggg tattcgggac      1560
     aatgcttgat gatggacaag caagacttaa ccctgtatct gcagtatttg ataacatctc      1620
     ccgcagtcgc ataacccggg taagttcaag cagaaccaag gcagcataca cgacatcgac      1680
     atgttttaaa gttgtcaaga ccaataaaac atatgtcctc agcattgcag aaatatccaa      1740
     taccctcttc ggagaattta ggatcgttcc tttactagtt gagattctca agaatgatgg      1800
     ggtttaagaa gccaggtctg gttagttgag tcaactgtgg gagggttgga aagatgacat      1860
     tgtgtcacct attttttgta atgccaagga tcaaaatgaa taccagcgcg agctcgaatc      1920
     ctactccgcc agtcagccat aatcagatag tgctaatatg attaatctaa atcttgtcga      1980
     tagtcacttg gttaagaaaa aa                                               2002
//