EBI Dbfetch

ID   M23980; SV 1; linear; genomic DNA; STD; PHG; 1905 BP.
XX
AC   M23980; M21947;
XX
DT   06-JUL-1989 (Rel. 20, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 5)
XX
DE   Bacteriophage H30 shiga-like toxin (SLT) gene encoding the A and B
DE   subunits, complete cds.
XX
KW   Shiga-like toxin; SLT.
XX
OS   Phage h30
OC   Viruses.
XX
RN   [1]
RP   1-1905
RX   DOI; 10.1016/0378-1119(88)90398-8
RX   PUBMED; 3049254.
RA   Kozlov Y.V., Kabishev A.A., Lukyanov E.V., Bayev A.A.;
RT   "The primary structure of the operons coding for Shigella dysenteriae toxin
RT   and temperate phage H30 shiga-like toxin";
RL   Gene 67(2):213-221(1988).
XX
CC   NCBI gi: 215049
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1905
FT                   /organism="Phage h30"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:12371"
FT   sig_peptide     206..273
FT                   /codon_start=1
FT                   /note="shiga-like toxin A subunit signal peptide"
FT   CDS             206..1153
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /note="shiga-like toxin A subunit precursor;  NCBI gi:
FT                   215050"
FT                   /db_xref="GOA:P10149"
FT                   /db_xref="InterPro:IPR001574"
FT                   /db_xref="InterPro:IPR016138"
FT                   /db_xref="InterPro:IPR016139"
FT                   /db_xref="InterPro:IPR016331"
FT                   /db_xref="InterPro:IPR017988"
FT                   /db_xref="UniProtKB/Swiss-Prot:P10149"
FT                   /protein_id="AAA72732.1"
FT                   /translation="MKIIIFRVLTFFFVIFSVNVVAKEFTLDFSTAKTYVDSLNVIRSA
FT                   IGTPLQTISSGGTSLLMIDSGSGDNLFAVDVRGIDPEEGRFNNLRLIVERNNLYVTGFV
FT                   NRTNNVFYRFADFSHVTFPGTTAVTLSGDSSYTTLQRVAGISRTGMQINRHSLTTSYLD
FT                   LMSHSGTSLTQSVARAMLRFVTVTAEALRFRQIQRGFRTTLDDLSGRSYVMTAEDVDLT
FT                   LNWGRLSSVLPDYHGQDSVRVGRISFGSINAILGSVALILNCHHHASRVARMASDEFPS
FT                   MCPADGRVRGITHNKILWDSSTLGAILMRRTISS"
FT   mat_peptide     274..1015
FT                   /codon_start=1
FT                   /note="shiga-like toxin A1 subunit (pot.); putative"
FT   mat_peptide     1016..1150
FT                   /codon_start=1
FT                   /note="shiga-like toxin A2 subunit (pot.); putative"
FT   sig_peptide     1163..1221
FT                   /codon_start=1
FT                   /note="shiga-like toxin B subunit signal peptide"
FT   CDS             1163..1432
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /note="shiga-like toxin B subunit precursor;  NCBI gi:
FT                   215051"
FT                   /db_xref="GOA:P69178"
FT                   /db_xref="InterPro:IPR003189"
FT                   /db_xref="InterPro:IPR008992"
FT                   /db_xref="PDB:2C5C"
FT                   /db_xref="UniProtKB/Swiss-Prot:P69178"
FT                   /protein_id="AAA72733.1"
FT                   /translation="MKKTLLIAASLSFFSASALATPDCVTGKVEYTKYNDDDTFTVKVG
FT                   DKELFTNRWNLQSLLLSAQITGMTVTIKTNACHNGGGFSEVIFR"
FT   mat_peptide     1222..1429
FT                   /codon_start=1
FT                   /note="shiga-like toxin SLT B subunit"
XX
SQ   Sequence 1905 BP; 504 A; 346 C; 468 G; 587 T; 0 other;
     caataaatgt tgttatctac gtacgtcaag tagtcgcatg agatctgacc agatatgtta        60
     aggttgcagc tctctttgaa tatgattatc attttcatta cgttattgtt acgtttatcc       120
     ggtgcgccgt aaaacgccgt ccttcagggc gtggaggatg tcaagaatat agttatcgta       180
     tggtgctcaa ggagtattgt gtaatatgaa aataattatt tttagagtgc taactttttt       240
     ctttgttatc ttttcagtta atgtggtggc gaaggaattt accttagact tctcgactgc       300
     aaagacgtat gtagattcgc tgaatgtcat tcgctctgca ataggtactc cattacagac       360
     tatttcatca ggaggtacgt ctttactgat gattgatagt ggctcagggg ataatttgtt       420
     tgcagttgat gtcagaggga tagatccaga ggaagggcgg tttaataatc tacggcttat       480
     tgttgaacga aataatttat atgtgacagg atttgttaac aggacaaata atgtttttta       540
     tcgctttgct gatttttcac atgttacctt tccaggtaca acagcggtta cattgtctgg       600
     tgacagtagc tataccacgt tacagcgtgt tgcagggatc agtcgtacgg ggatgcagat       660
     aaatcgccat tcgttgacta cttcttatct ggatttaatg tcgcatagtg gaacctcact       720
     gacgcagtct gtggcaagag cgatgttacg gtttgttact gtgacagctg aagctttacg       780
     ttttcggcaa atacagaggg gatttcgtac aacactggat gatctcagtg ggcgttctta       840
     tgtaatgact gctgaagatg ttgatcttac attgaactgg ggaaggttga gtagcgtcct       900
     gcctgactat catggacaag actctgttcg tgtaggaaga atttcttttg gaagcattaa       960
     tgcaattctg ggaagcgtgg cattaatact gaattgtcat catcatgcat cgcgagttgc      1020
     cagaatggca tctgatgagt ttccttctat gtgtccggca gatggaagag tccgtgggat      1080
     tacgcacaat aaaatattgt gggattcatc cactctgggg gcaattctga tgcgcagaac      1140
     tattagcagt tgagggggta aaatgaaaaa aacattatta atagctgcat cgctttcatt      1200
     tttttcagca agtgcgctgg cgacgcctga ttgtgtaact ggaaaggtgg agtatacaaa      1260
     atataatgat gacgatacct ttacagttaa agtgggtgat aaagaattat ttaccaacag      1320
     atggaatctt cagtctcttc ttctcagtgc gcaaattacg gggatgactg taaccattaa      1380
     aactaatgcc tgtcataatg gagggggatt cagcgaagtt atttttcgtt gactcagaat      1440
     agctcagtga aaatagcagg cggagattca taaatgttaa atacatctca attcagtcag      1500
     ttgttgccgg tctgataata gatgtgttag aaaatttctg catggtgaat ccccctgtgc      1560
     ggaggggcga ctggtgaacg gtatgatctc tttgatgatc gtaagcgaga atacgcgggt      1620
     ttggtggccc aaggccgaac tcaccgggag gcacccggca tcatgctgta tacagagatt      1680
     caggcatata tccaggctcc tcatcgcagg agccttttta catgcacaaa aaagcccgag      1740
     tgggttcggg caacagcatg agatacttgc attgtcattt ttatcgtgcg gattttaacc      1800
     aggattcata aggctgcgca actgcgcggc ctttttcgaa ttgcgggctg tagtccccgt      1860
     gtgtcattca ggcttccgga ctacagccca ctccatatgt tattt                      1905
//