 |
|
EBI DbfetchID M21635; SV 1; linear; genomic DNA; STD; VRT; 9138 BP. XX AC M21635; XX DT 22-APR-1989 (Rel. 19, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 5) XX DE Duck (A.platyrhynchos) S-acyl fatty acid synthase thioesterase gene, DE complete cds. XX KW S-acyl fatty acid synthase. XX OS Anas platyrhynchos OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; OC Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; OC Neognathae; Anseriformes; Anatidae; Anas. XX RN [1] RP 1-9138 RX PUBMED; 2850144. RA Sasaki G.C., Cheesbrough V., Kolattukudy P.E.; RT "Nucleotide sequence of the S-acyl fatty acid synthase thioesterase gene RT and its tissue-specific expression"; RL DNA 7(7):449-457(1988). XX CC Draft entry and computer-readable sequence for [1] kindly provided CC by G.C/Sasaki. 02-DEC-1988. XX FH Key Location/Qualifiers FH FT source 1..9138 FT /organism="Anas platyrhynchos" FT /mol_type="genomic DNA" FT /db_xref="taxon:8839" FT prim_transcript 1119..8320 FT /note="FASA mRNA and introns" FT intron 1268..3332 FT /note="FASA intron A" FT CDS join(3335..3464,4791..4929,5535..5634,6581..6750, FT 7686..7768,8000..8133) FT /codon_start=1 FT /note="S-acyl fatty acid synthase thioesterase" FT /db_xref="GOA:P00633" FT /db_xref="InterPro:IPR001031" FT /db_xref="InterPro:IPR012223" FT /db_xref="UniProtKB/Swiss-Prot:P00633" FT /protein_id="AAA49219.1" FT /translation="MDKVIARPYKRPNALCRLICFPWAGGNCSFFIRWCEAFSSIIEVS FT VIRLAGRECRDTEPFPEDMAEVVNEITNALLKDLQEKPFALFGHSFGSFVSYALAVHLK FT EKHGLEPVHMFFSGSYGPHSEYFHLMYKLPEVEDSRLLELIHTLGGTPPEFLQNEQITK FT HLLRVLKEDQKVLVTYPWHDVRKKYFSCDLTCFNGSDEKNHGSEAWIAITSGDTSIYSL FT PGNHFYLMEPSNETFLIKYITKCIENSDI" FT exon <3335..3464 FT /number=2 FT /note="S-acyl fatty acid synthase thioesterase, (first FT expressed exon)" FT intron 3465..4790 FT /note="FASA intron B" FT exon 4791..4929 FT /number=3 FT intron 4930..5534 FT /note="FASA intron B" FT exon 5535..5634 FT /number=4 FT intron 5635..6580 FT /note="FASA intron B" FT exon 6581..6750 FT /number=5 FT intron 6751..7685 FT /note="FASA intron B" FT exon 7686..7768 FT /number=6 FT intron 7769..7999 FT /note="FASA intron B" FT exon 8000..>8133 FT /number=7 FT /note="S-acyl fatty acid synthase thioesterase" XX SQ Sequence 9138 BP; 2594 A; 1733 C; 1807 G; 3004 T; 0 other; ggtactgaaa tgtccgctcc tcggccgact cctgcacttg cttctccatg tcgcaggcct 60 gcagcacaac gccaaggcct cggtgaagct gaaggcagag gatttatttc cctaccccgc 120 tccctctccc cgaatccctc ccgcaaggag gcatcacggc agcaggacca cagagaggag 180 gattttgggg ttaacccccc cacaccaagc cgtgcccggc cggctcgctg ccaccgggcg 240 cccccccccc cgctgccagc cgggccggca gcgctcacct cgccccgcac gtccctgtcc 300 ctgtcgctat cgctgtcgct gtcgctgtcc ctgtcgccga ctcagcgctc aggcagcctt 360 acctttgccc cactcccagc gggcccggga ggcggagcgg ggcgggacgg ggtgggacgg 420 gacgggacgg ggcggccggc gaggtcgggg cggaggcgga ggggagggag aagggaaggg 480 aaggaaagga aaggaagaag ggagggaggc ggagttctgg gggcccgcag aggggctgat 540 taaaggacaa agggggaaag tgctgctgct gggctggggg ggggtccggc gccttgtctg 600 cgtgcctcag ggcacccgct gaggggccct tccccgctga ggggcccttc ccagctggag 660 tcccccccgc gagccccttg cttggggttt tctttgggga gcagacacgg gtgttttgtg 720 caacacaggg tgtagcaggg ctgtggggtt gcctgcaggc tgttagcagg gcgtgtggct 780 gggaggcatg tggggtagct caggaagggg agcggcccca ccgagggagt ggaggtgaac 840 gcgagggtga gagcagggtt tggagcagtc ctagcttatg gagccagtgc ttggccacac 900 tggtgctggg caagcgacac acggcctgcc ctgtctgacc tgccacagtt gacgtggagc 960 acccttctgc aattgcttta catcacacct aacacgtggc gctctagtct cctttgggga 1020 ctcatgtatt tcagtccctg ccttttttct ggtgcctaga ctcctcccct taaacctgaa 1080 aaaatactta aagcaagcac ctgtgccacc cgggtgcata tcccttcctc acttgcaaga 1140 cgggctttgc cctgtatctg ctaagacgta acagttctgg gtcttgcttc ttgttatgca 1200 gcactgacaa gtggatcgac ccttgggctg tcgttttctg gcgcttgtgt ccttcataat 1260 tattcaggta ttttgcatct aaagtaagct ggatggtgat aaaatctgca tgagtggcaa 1320 gtgtgaaagg ctctcagtga ctggtgatat atctttaaat agcttaagga ctttgacaaa 1380 atgtgcttct ttctcatgcc tgaaattttt gtgtcatctt tagaatcagt ttgagatttt 1440 tcttaatttt ccatcaagtt aaaaggtttc caaaatgttt gagtgtgtgt ctttttgtgg 1500 aaaaagtgac tgtgtaactg ggagtaatgg tcctgacact aaatgaacct acccgaggaa 1560 ttacatcttc cgcagtgctg gttccaccat tcctcactaa tttcaaagct cacaggtttt 1620 gcctattgac ttttgctcca agtttgttca tcttgctttt cttgcagttc ctttgatgtg 1680 attcttaaca gatgttggca cacttcccag tttaaacaca cctgaaattt aagaaaattt 1740 cagccacagc aacatcacag tagattttct tctctgttgg ttgcattaaa aggagtatga 1800 attgctacct attctgatcc agttgcattt ctcacacttt ttgtgcaggt agaaagggct 1860 gcatgtagat atgtaggtgt atttatgatt aatctgccct tgcatatact gagctatgtt 1920 cacagggaaa aataatatct gcaaggattt tcagcatctt ggaaatgtgt tttgttattt 1980 ttttctgctt atttttatct agtaaatact agttctccag tctttttcac aggaacatgt 2040 gattttattt taatggttgc aggtttttta ttattctgtt tctctgttgc ttctaagtaa 2100 tttattttta ctaggttttt gtgttgttca tggtggtttt ttgacagaac acagcctggt 2160 acacggtaag tagtaggatg tcacctgagt gctcacgtca gcgaatctaa tcagcaataa 2220 agaagagaaa aggaaaggaa aataaatcag gaaagaaaaa gaatggttta gaatcccttt 2280 tcagatagtg aagacagtgt ctggtgctaa cgacaatgca gttggcatat ttgatgctat 2340 ttttcttctc agtatgaagg gagaagtagt tataagcctt gcttcagctg tcacttttgt 2400 ctgtcaggaa acaaaagcac taaagctgct gtgataaaac tgaacgtggt tctggtacct 2460 acaccatctc aaaaaggtta caacaaaatc agatgccaga gaagggtaag gatcatggtc 2520 atgagtatgg aagcactgcc atatgaagaa aaccaaagta aaccaggcct tttcattcaa 2580 gaaaaagaac tgacaaaaga actggaacat gacagaagat ctcaaaaata cttagaagca 2640 aatgctgaga gatgcaccat tcactttcta tactaatctg agggcaccta attcagttgt 2700 aggagtcctg ttcaatacag aaaaggagct ctttacgcat gcaggggcta gtagatcatt 2760 gcaagaggat gttgtggatg ttaaccacac ctaaggggag agtggataaa tgcatggaag 2820 agaaattcat agatgtttcc catatatgaa gaaactgcat ccagctattc cctggacatc 2880 catttttact gctgttggaa atagaatact gaaccaggtg gtctttatgt tttctacctc 2940 ttctatttgg gtatgctcta aaagcccgtg tttttaaagg gtcaccttga aaacccagat 3000 tgatatcttt tgctgcttgt tctttgtcat cagtgactca aatagaagaa aatattacaa 3060 aagatgttgc ccaatgctat tccatcacca tttataaaag cagaacctgg tttccacagt 3120 cgcatgaaga ttatctcata actgtctatt gccatagcac aagcagttct aatgacagaa 3180 aatattagcc cattgtttta aatcttactt cattcatttt aattttcctg tacctgaaga 3240 gtcttgttct agagtaatgt gatgttttct tgtttcgttt gttgttgttg ttgttgtttt 3300 tttgtttttt cgtttgtttg tttttctctt aggaatggat aaggtgattg cccgtccata 3360 caaaaggcca aatgctctct gtaggctgat ttgctttccc tgggctggag gtaactgttc 3420 tttctttatt cgatggtgcg aagccttcag cagcataatt gaaggttggt caattgtgta 3480 gttaaagact ttaagaaagc cagggtctct gaaatgcaca gttgcagaat ataatgctct 3540 tgacagctgt gcagtctttc tccagtgaat attatattca gaaaggaagt ctactaggat 3600 tccacatttc cattgggatg ctgggtatac taagcttctg taccactttg gatcaaatta 3660 tatttaatta agttaaaaag cgacatcctg agagataaat ttcacaggac tatagtatgc 3720 ttgtctgcct tggaaactgc tggtttgatt caagaaaggg taatgcagta aaaatatgct 3780 actgcatatt tcaaaggcat cagcagtgcc ttatatcctt atataagaac agtgaagtca 3840 taagaattgt tttttaatgt tgagaggctg cacagaatga aattcagttt atcaagcatt 3900 tttgtgtgga tagaaatact tctaacaaag ttacgaagaa gatagcctag gaatgactgc 3960 agagccagag gaataaagtc agggagcagc acgctccttc acatccttta attgtgctga 4020 aataaagtat aaaagacatg aacatttttg tactactgtc tgtggtatta tgtggtggct 4080 tattctgtct cttgtaaaat acttcacgtt tcacctgtta tgtccgtgct agtttggcaa 4140 tgtgttcaat gtcaaggaaa tttcaagaaa atcaccattt tactgatcta ttgattactt 4200 attttctcta aacagtgaga ggaaaaactc ctaattttga aaggggtgta aaaagataag 4260 atatgccctt ttgtatagct attaaatccc atcagtttat acaattttgc attttactgt 4320 gtgcagcact gaagagcctt caaagaggaa aatgggaact gtatgatcct aatacagttt 4380 gttaacattc taatgttgcc cttgaaatga tattttttac acaaccctca gagttggttt 4440 tattgaaatc gttattttta ttaatgccta cagcataaaa ttgtttcaaa cctcagctga 4500 gatcatgacc ttgttatcat tttaactgga tttctgactt aaggcattta taaatttgat 4560 cagtgggaga ggcaacactt gtcagttaag gaaggaaacc tgatctgtct ttaatcacag 4620 gattaaaata tagcagtagc aatagcaaat acactgtatc aactacaaaa aggattaatt 4680 taaataatct gtatactctg cagaatagaa aatttagtaa aaatgatgtt actgtttttt 4740 cttgaaatga ctgtaattct tttccctccc ttcctccatc tcttctgtag tgtccgttat 4800 aaggcttgct ggaagagaat gtcgtgatac ggagcctttt ccagaagaca tggcagaagt 4860 agttaatgaa attacaaatg ctttgttaaa agatctgcaa gaaaaaccat ttgcattatt 4920 tggtcacagg taaagatgta tacgttttag ataccctggt gaaggaactg taggagtaga 4980 tagtgacttg tctttgtttg cagaaaccct aggcagatac actctgcaaa ggtcttttgt 5040 caagccatgc taaaccatgc tgctaatctc aaagactctg gttatttata ttttgattac 5100 ttcaggcaca atgtcttcta agaatggcag tgctgtgatt tatttttaca ctaataaatt 5160 ataattgttt actggtaata tttgtgtcag tgctcactct aaagtgaaaa catagggtga 5220 acaaatgcgt agattttgaa gatcacttag tcccaagtat tcaaaataac catccttact 5280 ggaattcagg aaactactag aataaatggg gcgaaaaacg tctaatttgt aaaactagtc 5340 tgtgttggaa ggtactttgt gtgagttagc taaatcactg tatgtcattt atacagaacc 5400 ataaaattca ctagagttac agtttcaata aatgttcaag gtagccagtt agcactaaaa 5460 ttcaaattat gttcacgctt tccagttttt acttaatttt tattatgttg ttttaacttc 5520 tctttttgct gcagttttgg atctttcgtt agttatgcac ttgcagtaca cttgaaagag 5580 aagcacggat tagagccggt ccatatgttt ttctcagggt catatggccc acatgtaagt 5640 tataaattca ttaacaacaa caacaaaaca aaacaaaaaa acagtgtatt agatggcatg 5700 agtaaaacac ttgtgaattt cacattgcag agtatttact gtggctatcc ttagcctagg 5760 gagaatggtc tccttgagct aatgctattt tttctgaatg ctctattatt tactctggtc 5820 tttggcttaa aaaagcaatg aaaacaaaac ataaagtgac acttcctgct ccataacatg 5880 tgaaacaact gtcttagtct agcattttat aaatctcctg caccagccct cggtacattt 5940 gacaaggtat ttctttccct cctcattctc tgttgccatt gtaatctgtt ctcagttccc 6000 tctgcttctg agtttctggt gattctgtta gtctttctca gtaaaacaaa acaaatgagc 6060 tggctttttc ctagccatct tgtcctcagc atcatttgct ctttccattc ttctgttcat 6120 ggtgtttatt accaatgttg ttcattgagc tagcacttca tggaagacat tatgattcct 6180 gaaaatttcc ctaatctgtg ggtctctcca gtcctacatt agttggcatt gtatctactg 6240 caagattttt ctttctatta tatgttttat taatttcttc ataggtgaga ttcaactttg 6300 aacaaaaaca cattaaatgt tatctgtctg gaagtctcaa aacatagtgt ttgtctcagt 6360 tataatcagt taaaaaccag tctactaacc ctaccctgta cctgcaaatg ttaagctaat 6420 cagccattgt gtattggcaa tagagaatct tcatactttt tttactaaag caattattag 6480 tgaaaatact ttttaatgtg gtgtatgtta gggtgtatta ttcagtatta tttaatatgg 6540 tgtatatttt atatgtcacc ccatctgttt tgtctgacag agtgaatatt ttcatctgat 6600 gtacaaattg cctgaagtag aagatagtcg cttgcttgaa cttatacaca cattaggagg 6660 aactcctcct gagtttctgc aaaatgaaca aatcaccaaa catttgttac gtgttttaaa 6720 agaagaccag aaagttcttg tcacatatcc gtaagtttta taattttgca ttacgtttat 6780 attttaaagc tttacttatg tctggtcact tcaggttttc ttttttctgt ctctgaaatt 6840 tgttctagat tttgaattag attagttata taaaataaat aaataaataa acagtaaaca 6900 tagtttcctc ctttatgtgt ttttctagtg tttataccac agatgaaaac actgcttaca 6960 gtagtggata ctactgttgt tacagtcgtg aatatatcac tgtagaatta cgattctact 7020 taagatccaa aattagtagc cactacaagg actctacatt cacacctttt attgttttct 7080 gagagttgta agatcagcta atcatgcttc aggatcatgc ttctgatcct gatcagcctc 7140 ctgatccaag ggccctaacc tatctggaag caaagaatcc ctttattcta ggaatcaaga 7200 gggtaaccag cttcttctgt cccacttact gtctccagtg gccttaacca ctcaggttat 7260 gtacctgagt ggttaaggtt tctcatccta gcaaagagaa ggaccctatt ttggtccttg 7320 caacctgaca ttgctaaggg cctgaaacat cagaacttgg atataagcag acaacataat 7380 tgtttattat tagtgagaat ttttaatgca ggttgaattt cttttttttt ttttttttcc 7440 taactgctag gtcatatttt ctttaaaact cgagacataa gtgcagtaag gtaaggggct 7500 aagactctta cagatacaga aagtcatttt cctgatgttc tgcgcaactt aatctataat 7560 atttctgcta tgttataaat tttctgttgt gtttttgagt agaaagaaaa agctttttat 7620 atgtggaatc aaaacccaaa cataggtatc ctatggaaaa ttgtataact tttttgtgtt 7680 cacagttggc acgatgtaag aaagaaatac ttctcttgtg atcttacctg ctttaacggg 7740 tctgatgaaa aaaaccatgg ctcagaaggt actttactta aatggctttc ctctcatact 7800 taggcatttt cctgatataa caaatcatta aatgaatgga gttcttctga atcttttacc 7860 accttcttaa atgaaacaga aatatacaga aatacggaga aaaacagttg atatgtgatt 7920 taaaataatt aaataataat ttacttatgt aaaatgacca caatagttta catttctttt 7980 atattttaat ctttttcagc ctggattgca ataaccagtg gagatacttc catttacagt 8040 cttcctggaa atcactttta tctaatggag ccttctaacg aaactttctt gataaaatac 8100 ataactaaat gtatagaaaa ttctgacata tgagtatttc cctccatttt aataatagaa 8160 ggtgtaagat aactccacag aacttaataa ttaagtcatt ctttctgtta aattgcattc 8220 agttatgcct aaatgtaact ctgttcctcc agaacatttt tattgtaatc atttaaaaga 8280 agttgttctg ttacaaaaat aaacattgtc ttcatgtctt aaaagtaaaa acttttcatc 8340 ttttccttct tttcatctca cacatgcaca aacccttcac tgtattcaat aacaatcatt 8400 tgctaaaaaa gacagctgtt gttttacttt tagagcttct ctgtatgcta ctgtaaaaat 8460 gctaaatgta atttaacact cacaaaaatc cacaattctt aaaagaaata tctatttaat 8520 aggttcaaat ttatttagaa taagatgtag tccaaaaata cagtatatgt gtaaacacct 8580 ttaccatgca atggttcaca cttaaaagat tttactgtca gactactaca gttattttct 8640 cagcagagtt agttcattag ctacgaagag ttagttagta gtgggaatta ctctgagtat 8700 tctaaatccc atattttcta ccattgtttt gctttagaaa tataagcatt catggcatcc 8760 tcctttgata tacctgcaaa gaaaagtagg agtaattatt ggcttgtatt tgcagttcta 8820 tttaagtgat tacgtgtggt aaatttaatt gctttaacac cttttttcag gttccatgcc 8880 tcccatttgg ctttgccttt caaatctagc attcttgggc actctgccaa aataaatgca 8940 tacctttatt gattatcatg caggtttata caacatttgc ttgattgcaa ggtatgggtg 9000 taaatttgct gttatatata gtaacaggaa taccaatatt aatatctcca actgtagcct 9060 gtttgtagaa tccatacagt tccttcagtt cttcatctgt tggtcttgtt tttaattttt 9120 ttacttcttc tgcaggtc 9138 // |
|