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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   M18762; SV 1; linear; genomic RNA; STD; VRL; 1882 BP.
XX
AC   M18762;
XX
DT   04-OCT-1988 (Rel. 17, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 8)
XX
DE   Human Human parainfluenza virus type 3 TEX/545/80 hemagglutinin-
DE   neuraminidase (HN) mRNA, complete cds.
XX
KW   fusion protein; glycoprotein; haemagglutinin; hemagglutinin/neuraminidase;
KW   neuraminidase.
XX
OS   Human parainfluenza virus 3
OC   Viruses; ssRNA negative-strand viruses; Mononegavirales; Paramyxoviridae;
OC   Paramyxovirinae; Respirovirus.
XX
RN   [1]
RP   1-1882
RX   DOI; 10.1016/0042-6822(88)90402-3
RX   PUBMED; 2827373.
RA   van Wyke Coelingh K.L., Winter C.C., Murphy B.R.;
RT   "Nucleotide and deduced amino acid sequence of hemagglutinin-neuraminidase
RT   genes of human type 3 parainfluenza viruses isolated from 1957 to 1983";
RL   Virology 162(1):137-143(1988).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1882
FT                   /organism="Human parainfluenza virus 3"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:11216"
FT   mRNA            1..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            2..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            3..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            4..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            5..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            6..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            7..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            8..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            9..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            10..1882
FT                   /note="HN mRNA (alt.)"
FT   CDS             74..1792
FT                   /codon_start=1
FT                   /note="hemagglutinin-neuraminidase fusion protein"
FT                   /db_xref="GOA:P12562"
FT                   /db_xref="InterPro:IPR000665"
FT                   /db_xref="InterPro:IPR011040"
FT                   /db_xref="InterPro:IPR016285"
FT                   /db_xref="UniProtKB/Swiss-Prot:P12562"
FT                   /protein_id="AAA46849.1"
FT                   /translation="MEYWKHTNHGKDAGNELETSMATHGNKLTNKIIYILWTIILVLLS
FT                   IVFIIVLTNSIKSEKAHESLLRDINNEFIGITEKIQMASDNTNDLIQSGVNTRLLTIQS
FT                   HVQNYIPISLTQQMSDLRKFISEITIRNDNQEVLPQRITHDVGIKPLNPDDFWRCTSGL
FT                   PSLMKTPKIRLMPGPGLLAMPTTVDGCIRTPSLVINDLIYAYTSNLITRGCQDIGKSYQ
FT                   VLQIGIITVNSDLVPDLNPRISHTFNINDNRKSCSLALLNTDVYQLCSTPKVDERSDYA
FT                   SSGIEDIVLDIVNYDGSISTTRFKNNNISFDQPYAALYPSVGPGIYYKGKIIFLGYGGL
FT                   EHPIDENVICNTTGCPGKTQRDCNQASHSPWFSDRRMVNSIIVVDKGLNSTPKLKVWTI
FT                   SMRQNYWGSEGRLLLLGNKIYIYTRSTSWHSKLQLGIIDITDYSDIRIKWTWHNVLSRP
FT                   GNNECPWGHSCPDGCITGVYTDAYPLNPTGSIVSSVILDSQKSRVNPVITYSTATERVN
FT                   ELAIRNRTLSAGYTTTSCITHYNKGYCFHIVEINHKSSNTFQPMLFKTEIPKSCS"
XX
SQ   Sequence 1882 BP; 703 A; 348 C; 340 G; 491 T; 0 other;
     aggagtaaag ttacgcaatc caactctact catataattg aggaaaaacc caatagacaa        60
     attcaaatcc gagatggaat actggaagca taccaatcac ggaaaggatg ctggtaatga       120
     gctggagacg tccatggcta ctcatggcaa caagctcact aataagataa tatacatatt       180
     atggacaata atcctggtgt tattatcaat agtcttcatc atagtgctaa ccaattccat       240
     caaaagtgaa aaggcccacg aatcattgct gcgagacata aacaatgagt ttataggaat       300
     tacagaaaag atccaaatgg catcggataa taccaatgat ctaatacagt caggagtgaa       360
     tacaaggctt cttacaattc agagtcatgt acagaattac ataccaatat cattgacaca       420
     acagatgtca gatcttagga aattcattag tgaaattaca attagaaatg ataatcaaga       480
     agtgctgcca caaagaataa cacatgatgt aggtataaaa cctttaaatc cagatgattt       540
     ttggagatgc acgtctggtc ttccatcttt aatgaaaact ccaaaaataa ggttaatgcc       600
     ggggccgggg ttattagcta tgccaacgac tgttgatggc tgtattagaa ctccgtcttt       660
     agttataaat gatctgattt atgcttatac ctcgaatcta attactcgag gttgtcagga       720
     tataggaaaa tcatatcaag tcttacagat agggataata actgtaaact cagacttggt       780
     acctgactta aatcctagga tctctcatac tttcaacata aatgacaata ggaagtcatg       840
     ctctctagca ctcctaaata cagatgtata tcaactgtgt tcaactccca aagttgatga       900
     aagatcagat tatgcatcat caggcataga agatattgta cttgatattg tcaattatga       960
     tggctcaatc tcaacaacaa gatttaagaa taataacata agctttgatc aaccatatgc      1020
     tgcgctatac ccatctgttg gaccagggat atactacaaa ggcaaaataa tatttctcgg      1080
     atatggaggt cttgaacatc caatagatga gaatgtaatc tgcaacacaa ctgggtgtcc      1140
     cgggaaaaca cagagagact gtaatcaagc gtctcatagt ccatggtttt cagataggag      1200
     gatggtcaac tccatcattg ttgttgacaa aggcttaaac tcaactccaa aattgaaggt      1260
     atggacgata tctatgcgac aaaattactg ggggtcagaa ggaaggttac ttctactagg      1320
     taacaagatc tatatatata caagatctac aagttggcat agcaagttac aattaggaat      1380
     aattgatatt actgattaca gtgatataag gataaaatgg acatggcata atgtgctatc      1440
     aagaccagga aacaatgaat gtccatgggg acattcatgt ccagatggat gtataacagg      1500
     agtatatact gatgcatatc cactcaatcc cacagggagc attgtgtcat ctgtcatatt      1560
     agactcacaa aaatcgagag tgaacccagt cataacttac tcaacagcaa ccgaaagagt      1620
     aaacgagctg gccattcgaa acagaacact ctcagctgga tatacaacaa caagctgcat      1680
     tacacactat aacaaaggat attgttttca tatagtagaa ataaatcaca aaagctcaaa      1740
     cacatttcaa cccatgttgt tcaaaacaga gattccaaaa agctgcagtt aatcataacc      1800
     aaccataata tgcaccaacc tatctataac acaagtatat gataagtaat cagcaatcaa      1860
     acaatagaca aaagggaaat at                                               1882
//
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