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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   M18761; SV 1; linear; genomic RNA; STD; VRL; 1882 BP.
XX
AC   M18761;
XX
DT   04-OCT-1988 (Rel. 17, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 8)
XX
DE   Human parainfluenza virus type 3 WASH/649/79 hemagglutinin- neuraminidase
DE   (HN) mRNA, complete cds.
XX
KW   fusion protein; glycoprotein; haemagglutinin; hemagglutinin/neuraminidase;
KW   neuraminidase.
XX
OS   Human parainfluenza virus 3
OC   Viruses; ssRNA negative-strand viruses; Mononegavirales; Paramyxoviridae;
OC   Paramyxovirinae; Respirovirus.
XX
RN   [1]
RP   1-1882
RX   DOI; 10.1016/0042-6822(88)90402-3
RX   PUBMED; 2827373.
RA   van Wyke Coelingh K.L., Winter C.C., Murphy B.R.;
RT   "Nucleotide and deduced amino acid sequence of hemagglutinin-neuraminidase
RT   genes of human type 3 parainfluenza viruses isolated from 1957 to 1983";
RL   Virology 162(1):137-143(1988).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1882
FT                   /organism="Human parainfluenza virus 3"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:11216"
FT   mRNA            1..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            2..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            3..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            4..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            5..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            6..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            7..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            8..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            9..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            10..1882
FT                   /note="HN mRNA (alt.)"
FT   CDS             74..1792
FT                   /codon_start=1
FT                   /note="hemagglutinin-neuraminidase fusion protein"
FT                   /db_xref="GOA:P12565"
FT                   /db_xref="InterPro:IPR000665"
FT                   /db_xref="InterPro:IPR011040"
FT                   /db_xref="InterPro:IPR016285"
FT                   /db_xref="UniProtKB/Swiss-Prot:P12565"
FT                   /protein_id="AAA46848.1"
FT                   /translation="MEYWKHTNHGKDAGNELETSMATHGNKLTNKIIYILWTIILVLLS
FT                   IVFIIVLINSIKSEKAHESLLQDINNEFMEITEKIQMASDNTNDLIQSGVNTRLLTIQS
FT                   HVQNYIPISLTQQMSDLRKFISEITIRNDNQEVLPQRITHDVGIKPLNPDDFWRCTSGL
FT                   PSLMKTPKIRLMPGPGLLAMPTTVDGCVRTPSLVINDLIYAYTSNLITRGCQDIGKSYQ
FT                   VLQIGTITVNSDLVPDLNPRISHTFNINDNRKSCSLALLNTDVYQLCSTPKVDERSDYA
FT                   SSGIEDIVLDIVNYDGSISTTRFKNNNISFDQPYAALYPSVGPGIYYKGKIIFLGYGGL
FT                   EHPINENVICNTTGCPGKTQRDCNQASHSPWFSDRRMVNSIIVVDKGLNSIPKLKVWTI
FT                   SMRQNYWGSEGRLLLLGNKIYIYTRSTSWHSKLQLGIIDITDYSDIRIKWTWHNVLSRP
FT                   GNNECPWGHSCPDGCITGVYTDAYPLNPTGSIVSSVILDSQKSRVNPVITYSTATERVN
FT                   ELAIRNRTLSAGYTTTSCITHYNKGYCFHIVEINQKSLNTFQPMLFKTEIPKSCS"
XX
SQ   Sequence 1882 BP; 706 A; 336 C; 338 G; 502 T; 0 other;
     aggagtaaag ttacgcaatc caactctact catataattg aggaaggacc caatcgaaaa        60
     atccaaattc gagatggaat actggaagca taccaatcac ggaaaggatg ctggtaatga       120
     actggagacg tctatggcta ctcatggcaa caagctcact aataagataa tatacatatt       180
     atggacaata atcctggtgt tattatcaat agtcttcatc atagtgctaa ttaattccat       240
     caaaagtgaa aaggcccacg aatcattgct gcaagacata aataatgagt ttatggaaat       300
     tacagaaaag atccaaatgg catcggataa taccaatgat ctaatacagt caggagtgaa       360
     tacaaggctt cttacaattc agagtcatgt ccagaattac ataccaatat cattgacaca       420
     acagatgtca gatcttagga aattcattag tgaaattaca attagaaatg ataatcaaga       480
     agtgctgcca caaagaataa cacatgatgt aggtataaaa cctttaaatc cagatgattt       540
     ttggagatgc acgtctggtc ttccatcttt aatgaaaact ccaaaaataa ggttaatgcc       600
     agggccggga ttattagcca tgccaacgac tgttgatggc tgtgttagaa ctccgtcttt       660
     agtcataaat gatctgattt atgcttatac ctcaaatcta attactcgag gttgtcagga       720
     tataggaaaa tcatatcaag tattacagat agggacaata actgtaaact cagacttggt       780
     acctgactta aatcctagga tctctcatac ttttaacata aatgacaata ggaagtcatg       840
     ttctctagca ctcctaaata cagatgtata tcaactgtgt tcaactccca aagttgatga       900
     aagatcagat tatgcatcat caggcataga agatattgta cttgatattg tcaattatga       960
     tggttcaatc tcaacaacaa gatttaagaa taataacata agctttgatc aaccatatgc      1020
     tgcactatac ccatctgttg gaccagggat atactataaa ggcaaaataa tatttctcgg      1080
     gtatggaggt cttgaacatc caataaatga gaatgtaatc tgcaacacaa ctgggtgtcc      1140
     cgggaaaaca cagagagact gtaatcaagc gtctcatagt ccatggtttt cagataggag      1200
     gatggtcaac tccatcattg ttgttgacaa aggcttaaac tcaattccaa aattgaaagt      1260
     atggacgata tctatgcgac aaaattactg ggggtcagaa ggaaggttac ttctactagg      1320
     taacaagatc tatatatata caagatctac aagttggcat agcaagttac aattaggaat      1380
     aattgatatt actgattaca gtgatataag gataaaatgg acatggcata atgtgctatc      1440
     aagaccagga aacaatgaat gtccatgggg acattcatgc ccagatggat gtataacagg      1500
     agtatatact gatgcatatc cactcaatcc cacagggagc attgtgtcat ctgtcatatt      1560
     agactcacaa aaatcgagag tgaacccagt cataacttac tcaacagcaa ctgaaagagt      1620
     aaacgagctg gccatccgaa acagaacact ctcagctgga tatacaacaa caagctgcat      1680
     tacacactat aacaaaggat attgttttca tatagtagaa ataaatcaga aaagcttaaa      1740
     cacatttcaa cccatgttgt tcaaaacaga gattccaaaa agctgcagtt aatcataatt      1800
     aaccataata tgcatcaatc tatctataat acaagtatat gataagtaat cagcaatcag      1860
     acaatagaca aaagggaaat at                                               1882
//
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