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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   M18760; SV 1; linear; genomic RNA; STD; VRL; 1882 BP.
XX
AC   M18760;
XX
DT   04-OCT-1988 (Rel. 17, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 8)
XX
DE   Human parainfluenza virus type 3 AUS/124854/74 hemagglutinin- neuraminidase
DE   (HN) mRNA, complete cds.
XX
KW   fusion protein; glycoprotein; haemagglutinin; hemagglutinin/neuraminidase;
KW   neuraminidase.
XX
OS   Human parainfluenza virus 3
OC   Viruses; ssRNA negative-strand viruses; Mononegavirales; Paramyxoviridae;
OC   Paramyxovirinae; Respirovirus.
XX
RN   [1]
RP   1-1882
RX   DOI; 10.1016/0042-6822(88)90402-3
RX   PUBMED; 2827373.
RA   van Wyke Coelingh K.L., Winter C.C., Murphy B.R.;
RT   "Nucleotide and deduced amino acid sequence of hemagglutinin-neuraminidase
RT   genes of human type 3 parainfluenza viruses isolated from 1957 to 1983";
RL   Virology 162(1):137-143(1988).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1882
FT                   /organism="Human parainfluenza virus 3"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:11216"
FT   mRNA            1..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            2..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            3..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            4..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            5..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            6..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            7..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            8..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            9..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            10..1882
FT                   /note="HN mRNA (alt.)"
FT   CDS             74..1792
FT                   /codon_start=1
FT                   /note="hemagglutinin-neuraminidase fusion protein"
FT                   /db_xref="GOA:P12561"
FT                   /db_xref="InterPro:IPR016285"
FT                   /db_xref="UniProtKB/Swiss-Prot:P12561"
FT                   /protein_id="AAA46847.1"
FT                   /translation="MEYWKHTNHGKDACNELGTSMATHGNKITNKITYILWTIILVLLS
FT                   IIFIIVLINSIKSEKAHESLLQDVNNEFMEVTEKIQMASDNINDLIQSGVNTRLLTIQS
FT                   HVQNYIPISLTQQMSDLRKFISEITIRNDNQEVPPQRITHDVGIKPLNPDDFWRCTSGL
FT                   PSLMKTPKIRLMPGPGLLAMPTTVDGCVRTPSLVINDLIYAYTSNLITRGCQDIGKSYQ
FT                   VLQIGIITVNSDLVPDLNPRISHTFNINDNRKSCSLALLNTDVYQLCSTPKVDERSDYA
FT                   SSGIEDIVLDIVNHDGSISTTRFKNNNISFDQPYAALYPSVGPGIYYKGKIIFLGYGGL
FT                   EHPINENAICNTTGCPGKTQRDCNQASHSPWFSDRRMVNSIIVVDKGLNSIPKLKVWTI
FT                   SMRQNYWGSEGRLLLLGNKIYIYTRSTSWHSKLQLGIIDITDYSDIRIKWTWHNVLSRP
FT                   GNNECPWGHSCPDGCITGVYTDAYPLNPTGSIVSSVILDSQKTRVNPVITYSTATERVN
FT                   ELAIRNKTLSAGYTTTSCITHYNKGYCFHIVEINHKSLDTFQPMLFKTEIPKSCS"
XX
SQ   Sequence 1882 BP; 712 A; 345 C; 334 G; 491 T; 0 other;
     aggagtaaag ttacgcaatt caactccact cacataattg agaaagaacc gaacagacaa        60
     atccaaatcc gagatggaat actggaagca caccaatcac gggaaagatg cttgtaatga       120
     gctgggaaca tccatggcca ctcatggcaa caagataacc aacaagataa catatatatt       180
     atggacaata atcctggtgt tattatcaat aatcttcatc atagtgctaa tcaattccat       240
     caaaagtgaa aaagcccatg aatcattgct acaagacgta aacaatgagt ttatggaagt       300
     tacagaaaag atccaaatgg catcggataa tattaatgat ctaatacaat caggagtgaa       360
     tacaaggctt cttacaattc agagtcatgt ccagaattat ataccaatat cattgacaca       420
     acaaatgtcg gatcttagga aattcattag tgaaattaca attaggaatg ataatcaaga       480
     agtgcctcca caaagaataa cacatgatgt gggcataaaa cctttaaatc cagatgactt       540
     ttggagatgc acgtctggtc ttccatcttt aatgaaaact ccaaaaataa ggttaatgcc       600
     ggggccggga ttattagcta tgccaacgac tgttgatggc tgtgttagaa ctccatcctt       660
     agttataaat gatctgattt atgcttatac ctcaaatcta attactcgag gttgccagga       720
     tataggaaaa tcatatcaag tattacagat agggataata actgtaaact cagacttggt       780
     acctgactta aatcctagga tctctcatac tttcaacata aatgacaata gaaaatcatg       840
     ttctctagca ctcctaaata cagatgtata tcaactgtgt tcgactccca aagttgatga       900
     aagatcagat tatgcatcat caggcataga agatattgta cttgatattg tcaatcatga       960
     tggttcaatc tcaacaacaa gatttaagaa caataatata agttttgatc aaccatatgc      1020
     ggcattatac ccatctgttg gaccagggat atactacaaa ggcaaaataa tatttctcgg      1080
     gtatggaggt cttgaacatc caataaatga gaatgcaatc tgcaacacaa ctgggtgtcc      1140
     cgggaaaacg caaagagact gcaatcaggc atctcatagt ccctggtttt cagacagaag      1200
     gatggtcaat tccattattg ttgttgacaa gggcttaaac tcaattccaa aactgaaggt      1260
     atggacgata tccatgagac aaaattactg ggggtcagaa ggaaggctac ttctactagg      1320
     taacaagatc tatatatata caagatctac aagttggcat agcaagttac aattaggaat      1380
     aattgatatt actgattaca gtgatataag aataaaatgg acatggcata acgtgctatc      1440
     aagaccagga aacaatgaat gtccatgggg acattcatgt ccagatggat gtataacagg      1500
     agtatatact gatgcatatc cgctcaatcc cacagggagc attgtgtcat ctgtcatatt      1560
     agactcgcaa aaaacgagag taaacccagt cataacttac tcaacagcaa ctgaaagagt      1620
     aaacgagctg gccatccgaa acaaaacact ctcagctgga tatacaacaa cgagctgcat      1680
     tacacactat aacaaaggat attgttttca tatagtagaa ataaatcata aaagcctaga      1740
     cacattccaa cctatgttgt tcaaaacaga gattccaaaa agctgcagtt aatcataatt      1800
     aaccataata tgtattaacc tatctataat acaagtatat gataagtaat caacaatcag      1860
     acaatagata aaagagaaat at                                               1882
//
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