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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   M18759; SV 1; linear; genomic RNA; STD; VRL; 1882 BP.
XX
AC   M18759;
XX
DT   04-OCT-1988 (Rel. 17, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 8)
XX
DE   Human parainfluenza virus type 3 WASH/1511/73 hemagglutinin- neuraminidase
DE   (HN) mRNA, complete cds.
XX
KW   fusion protein; glycoprotein; haemagglutinin; hemagglutinin/neuraminidase;
KW   neuraminidase.
XX
OS   Human parainfluenza virus 3
OC   Viruses; ssRNA negative-strand viruses; Mononegavirales; Paramyxoviridae;
OC   Paramyxovirinae; Respirovirus.
XX
RN   [1]
RP   1-1882
RX   DOI; 10.1016/0042-6822(88)90402-3
RX   PUBMED; 2827373.
RA   van Wyke Coelingh K.L., Winter C.C., Murphy B.R.;
RT   "Nucleotide and deduced amino acid sequence of hemagglutinin-neuraminidase
RT   genes of human type 3 parainfluenza viruses isolated from 1957 to 1983";
RL   Virology 162(1):137-143(1988).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1882
FT                   /organism="Human parainfluenza virus 3"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:11216"
FT   mRNA            1..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            2..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            3..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            4..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            5..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            6..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            7..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            8..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            9..1882
FT                   /note="HN mRNA (alt.)"
FT   mRNA            10..1882
FT                   /note="HN mRNA (alt.)"
FT   CDS             74..1792
FT                   /codon_start=1
FT                   /note="hemagglutinin-neuraminidase fusion protein"
FT                   /db_xref="GOA:P12566"
FT                   /db_xref="InterPro:IPR016285"
FT                   /db_xref="UniProtKB/Swiss-Prot:P12566"
FT                   /protein_id="AAA46844.1"
FT                   /translation="MEYWKHTNHGKDAGNELETSMATHGNKLTNKITYILWTIILVLLS
FT                   IVFIIVLINSIKSEKAHKSLLQDINNEFMEITEKIQMASDNTNDLIQSGVNTRLLTIQS
FT                   HVQNYIPISLTQQMSDLRKFISEITIRNDNQEVPPQRIIHDVGIKPLNPDDFWRCTSGL
FT                   PSLMRTPKIRLMPGPGLLAMPTTVDGCVRTPSLVINDLIYAYTSNLITRGCQDIGKSYQ
FT                   VLQIGIITVNSDLVPDLNPRISHTFNINDNRKSCSLALLNTDVYQLCSTPKVDERSDYA
FT                   SSGIEDIVLDIVNYDGSISTTRFKNNNISFDQPYAASYPSVGPGIYYKGKIIFLGYGGL
FT                   EHPINENVICNTTGCPGKTQRDCNQASHSPWFSDRRMVNSIIVVDKGLNSIPKLKVWTI
FT                   SMRQNYWGSEGRLLLLGNKIYIYTRSTSWHSKLQLGIIDITDYSDIRIKWTWHNVLSRP
FT                   GNNECPWGHSCPDGCITGVYTDAYPLNPTGSIVSSVILDSQKSRVNPVITYSTATERVN
FT                   ELAIRNRTLSAGYTTTSCITHYNKGYCFHIVEINHKSSNTFQPMLFKTEIPKSCS"
XX
SQ   Sequence 1882 BP; 704 A; 341 C; 341 G; 496 T; 0 other;
     aggagtaaag ttacgcaatc caactctact catacaattg agaaagaacc caatagacaa        60
     attcaaatcc gagatggaat actggaagca taccaatcac ggaaaggatg ctggtaatga       120
     gctggagacg tccatggcta ctcatggcaa caagctcact aataagataa catatatatt       180
     atggacaata atcctggtgt tattatcaat agtcttcatc atagtgctaa ttaattccat       240
     caaaagtgaa aaggcccata aatcattgct gcaagacata aataatgagt ttatggaaat       300
     tacagaaaag atccaaatgg catcggataa taccaatgat ctaatacagt caggagtgaa       360
     tacaaggctt cttacaattc agagtcatgt ccagaattat ataccaatat cattgacaca       420
     acagatgtcg gatcttagga aattcattag tgaaattaca attagaaatg ataatcaaga       480
     agtgccgcca caaagaataa tacatgatgt aggtataaaa cctttaaatc cagatgattt       540
     ttggagatgc acgtctggcc ttccatcttt aatgagaact ccaaaaataa ggttaatgcc       600
     agggccggga ttattagcta tgccaacgac tgttgatggc tgtgtcagaa ctccgtcctt       660
     agttataaat gatctgattt atgcttatac ctcaaatcta attactcgag gttgtcagga       720
     tataggaaaa tcataccaag tattacagat agggataata actgtaaact cagacttggt       780
     acctgactta aatcccagga tctctcatac tttcaacata aatgacaata ggaagtcatg       840
     ttctctagca ctcctaaata cagatgtata tcaactgtgt tcaactccca aagttgatga       900
     aagatcagat tatgcatcat caggcataga agatattgta cttgatattg tcaattatga       960
     tggctcaatc tcaacaacaa gatttaagaa taataacata agctttgatc aaccatatgc      1020
     tgcatcatac ccatctgttg gaccagggat atactacaaa ggcaaaataa tatttctcgg      1080
     gtatggaggt cttgaacatc caataaatga gaatgtaatc tgcaacacaa ctgggtgtcc      1140
     cgggaaaaca cagagagact gcaatcaggc gtctcatagt ccatggtttt cagataggag      1200
     gatggtcaac tccatcattg ttgttgacaa gggcttaaac tcaattccaa aattgaaggt      1260
     atggacgata tctatgagac aaaattactg ggggtcagaa ggaaggttgc ttctactagg      1320
     taacaagatc tatatatata caagatctac aagttggcat agcaaattac aattaggaat      1380
     aattgatatt actgattaca gtgatataag gataaaatgg acatggcata atgtgctatc      1440
     aagaccagga aacaatgaat gtccatgggg acattcatgt ccagatggat gtataacagg      1500
     agtatatact gatgcatatc cactcaatcc cacagggagc attgtgtcat ctgtcatact      1560
     agactcacaa aaatcgagag tgaacccagt cataacttac tcaacagcaa ctgaaagagt      1620
     aaacgagctg gccatcagaa acagaacact ctcagctgga tatacaacaa caagctgcat      1680
     tacacactat aacaaagggt attgttttca tatagtagaa ataaatcata aaagctcaaa      1740
     cacatttcaa cccatgttgt tcaaaacaga gattccaaaa agctgcagtt aatcataatt      1800
     aaccataata tgcattaacc tatctataat acaagtatat gataagtaat cagcaatcag      1860
     acaatagaca aaagggaaat at                                               1882
//
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