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EBI DbfetchID M17904; SV 1; linear; genomic DNA; STD; PRO; 5274 BP. XX AC M17904; XX DT 16-JUL-1988 (Rel. 16, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Pseudomonas putida benzene dioxygenase (cis-benzene glycol dehydrogenase DE cistron gene. XX KW benzene dioxygenase; dioxygenase; glycol dehydrogenase. XX OS Pseudomonas putida OC Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; OC Pseudomonadaceae; Pseudomonas. XX RN [1] RP 1-5274 RX PUBMED; 3667527. RA Irie S., Doi S., Yorifuji T., Takagi M., Yano K.; RT "Nucleotide sequencing and characterization of the genes encoding benzene RT oxidation enzymes of Pseudomonas putida"; RL J. Bacteriol. 169(11):5174-5179(1987). XX DR GOA; P0C621. DR UniProtKB/Swiss-Prot; P0C620; TODB_PSEPU. XX CC Draft entry and computer-readable copy of sequence in [1] kindly CC provided by S.Irie, 04-JAN-1988. XX FH Key Location/Qualifiers FH FT source 1..5274 FT /organism="Pseudomonas putida" FT /mol_type="genomic DNA" FT /db_xref="taxon:303" FT CDS 617..1963 FT /codon_start=1 FT /transl_table=11 FT /note="protein 1" FT /db_xref="GOA:P0C618" FT /db_xref="HSSP:1O7N" FT /db_xref="InterPro:IPR001663" FT /db_xref="UniProtKB/Swiss-Prot:P0C618" FT /protein_id="AAA25735.1" FT /translation="MNQTDTSPIRLRRSWNTSEIEALFDEHAGRIDPRIYTDEDLYQLE FT LERVFARSWLLLGHETQIRKPGDYITTYMGEDPVVVVRQKDASIAVFLNQCRHRGMRIC FT RADAGNAKAFTCSYHGWAYDTAGNLVNVPYEAESFACLNKKEWSPLKARVETYKGLIFA FT NWDENAVDLDTYLGEAKFYMDHMLDRTEAGTEAIPGVQKWVIPCNWKFAAEQFCSDMYH FT AGTTSHLSGILAGLPEDLEMADLAPPTVGKQYRASWGGHGSGFYVGDPNLMLAIMGPKV FT TSYWTEGPASEKAAERLGSVERGSKLMVEHMTVFPTCSFLPGINTVRTLASARAERGEV FT WAFTVVDADAPDDIKEEFRARLRTFSPVACSSRTTGRTGSRSSTSCEATSRSRPFNAEM FT SMDQTVDNDPVYPGRISNNVYSEEAARGLYAHWLRMMTSPDWDALKATR" FT CDS 2070..2633 FT /codon_start=1 FT /transl_table=11 FT /note="protein 2" FT /db_xref="GOA:P0C619" FT /db_xref="InterPro:IPR000391" FT /db_xref="UniProtKB/Swiss-Prot:P0C619" FT /protein_id="AAA25736.1" FT /translation="MIDSANRADVFLRKPAPVAPELQHEVEQFYYWEAKLLNDRRFEEW FT FALLAEDIHYFMPIRTTRIMRDSRLEYSGSREYAHFDDDATMMKGRLRKITSDVSWSEN FT PASRTRHLVSNVMIVGAEAEGEYEISSAFIVYRNRLERQLDIFAGERRDTLRRNTSEAG FT FEIVNRTILIDQSTILANNLSFFF" FT CDS 2688..2963 FT /codon_start=1 FT /transl_table=11 FT /note="protein 3" FT /db_xref="GOA:P08086" FT /db_xref="HSSP:1FQT" FT /db_xref="InterPro:IPR017941" FT /db_xref="UniProtKB/Swiss-Prot:P08086" FT /protein_id="AAA25737.1" FT /translation="MQRYEGGPEPVMVCNVDGEFFAVQDTCTHGDWALSDGYLDGDIVE FT CTLHFGKFCVRTGKVKALPACKPIKVFPIKVEGDEVHVDLDNGELK" FT CDS 2963..4192 FT /codon_start=1 FT /transl_table=11 FT /note="protein 4" FT /db_xref="GOA:P08087" FT /db_xref="HSSP:1D7Y" FT /db_xref="InterPro:IPR001327" FT /db_xref="UniProtKB/Swiss-Prot:P08087" FT /protein_id="AAA25738.1" FT /translation="MATHVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPS FT LSKAVLDGSLERPPILAEADWYGEARIDMLTGPEVTALDVQTRTISLDDGTTLSADAIV FT IATGSRARTMALPGSQLPGVVTLRTYGDVQVLRDSWTSATRLLIVGGGLIGCEVATTAR FT KLGLSVTILEAGDELLVRVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMA FT SDGRSFVADSALICVGAEPADQLARQAGLACDRGVIVDHCGATLAKGYSPSEMWPVGAA FT AGGRRSLETYMNAQRQAAAVAAAILGKNVSAPQLPVSWTEIAGHRMQMAGDIEGPGDFV FT SRGMPGSGAALLFRLQERRIQAVVAVDAPRDFALATRLVEARAAIEPARLADLSNSMRD FT FVRANEGDLT" FT CDS 4519..5016 FT /codon_start=1 FT /transl_table=11 FT /note="protein 5" FT /db_xref="GOA:P08088" FT /db_xref="HSSP:1BDB" FT /db_xref="InterPro:IPR002347" FT /db_xref="UniProtKB/Swiss-Prot:P08088" FT /protein_id="AAA25739.1" FT /translation="MFEVNVKGYILAAKAALPALYQSKGSAIFTVSNAGFYPGGGGVLY FT TAGKHAVIGLIKQLAHEWGPRIRVNGIAPGGILGSDLRGLKSLDLQDKSISTFPLDDML FT KSVLPTGRAATAEEYAGAYVFFATRGDTVPLTGSVLNFDGGMGVRGLFEASLGAQLDKH FT FG" XX SQ Sequence 5274 BP; 1054 A; 1495 C; 1676 G; 1049 T; 0 other; gaattcgttc ggcggtgctt gtctctggcc tttgctatcc gatttccgca tcgggttcgc 60 cgcctggtgc tgatgggtgc cgttgcgtga cgttcgagct cacggatgga ctggatgcag 120 tttggggtta tgagccgtcc gtgccgaaca tgcgcaaggt catggactac ttcgcctacg 180 accgaagtct cgtttccgac gaactggcgg aactgcgcta caagcgagca cccggcccgg 240 ttttcaggag gccttcgctt ccatgttccc tgctccgcgg cagcgctggg tagatgcgct 300 ggccagttcc gatcaggaca tccgggacat ccggcatgaa acgctgatcc tgcatggccg 360 cgacgatcgc gtgattcccc tcgaaacctc gttgcggctg aaccagctga tcgaaccctc 420 ccagttacat gtctttggca ggtgtggcca ttgggtgcag atcgagcaaa accggggctt 480 tatccgcttg gtcaacgatt ttcttgccgc ggaggactga tcgcaaaaac gggaatgacc 540 atccgttctg aaagcacgtc atcggcaatt gcctgccaag tacccgccat ccactacctt 600 gaaaagtgag aagacaatga atcagaccga cacatcacct atcaggctgc gcaggagctg 660 gaacaccagc gagatagaag cgctctttga cgagcatgcc ggacgtatcg atccgcgcat 720 ttataccgat gaggatctgt accaactcga actggagcgt gtcttcgccc ggtcctggct 780 gctgttgggg catgaaaccc agattcgcaa gccgggcgat tacatcacga cctacatggg 840 tgaagaccct gtcgtggtcg tccggcagaa agacgccagc attgccgtgt tcctgaacca 900 gtgccgccac cgtggcatgc gcatctgccg cgcggatgcc ggaaacgcga aggcgttcac 960 ttgcagctac cacgggtggg cttacgacac cgccggcaat cttgtcaatg tgccttacga 1020 ggccgaatcc ttcgcgtgcc tgaacaagaa ggaatggagc ccgctgaagg cccgggtaga 1080 aacctacaag ggcctgattt tcgccaactg ggatgagaac gctgtagacc tcgacacgta 1140 tctgggcgag gcgaagttct acatggacca catgctcgac cgcaccgagg ccggcaccga 1200 agcgatcccg ggcgtgcaga agtgggtcat tccctgtaac tggaaattcg ccgcagagca 1260 gttttgcagc gacatgtacc atgccgggac gacctcgcat ctgtctggca tcctggcagg 1320 cctgccagaa gaccttgaaa tggccgacct tgctccgccg acagttggca agcagtaccg 1380 tgcgtcatgg ggcggacatg gaagtggctt ctatgtcggc gaccccaatc tgatgcttgc 1440 catcatgggg ccaaaggtca ccagctactg gaccgaaggc cccgcgtcgg aaaaggcggc 1500 cgaacgtctg ggtagcgtgg agcgcggctc gaaactcatg gtcgagcaca tgaccgtctt 1560 ccccacgtgt tccttcctcc caggtatcaa tacggtccgg acattggcat ccgcgcgggc 1620 cgaacgaggt gaggtatggg cgtttacggt ggtcgatgct gatgctcctg acgatatcaa 1680 ggaagagttc cgcgccagac tgcgcacctt ctctccggtg gcgtgttcga gcaggacgac 1740 ggggagaact gggtcgagat ccagcacatc ctgcgaggcc acaagccgga gccgcccttt 1800 caatgccgag atgagcatgg accagaccgt cgacaacgac ccggtttacc ccgggcggat 1860 cagcaacaac gtctacagcg aggaagctgc ccgcgggctc tatgcccatt ggctgcggat 1920 gatgacatcc cccgactggg acgcgctgaa ggcgacacgc tgaatccaga gacagcttgc 1980 gccacgcagt gcggccagag gccgcatttg acttcgaccc aggttggatg cggtggacct 2040 tgtccatttg aaatctacaa ggaacgacca tgattgattc agccaacaga gccgacgtct 2100 ttctccgcaa gccggcaccc gtagcgcccg aactgcagca cgaagtcgag cagttctact 2160 attgggaggc caagcttctc aacgatcgcc gcttcgagga gtggttcgcg ctgctcgcgg 2220 aagacattca ctacttcatg cccattcgca ccacgcggat catgcgggac tcgcgccttg 2280 aatactcagg ctcccgagag tacgcgcact tcgatgacga cgccacgatg atgaagggac 2340 gcttgcgcaa gatcacgtcc gacgtgagct ggtccgagaa ccccgcatcg cggacccggc 2400 atctcgtgag caacgtgatg atcgtcggcg cagaggcaga aggggagtac gaaatctcaa 2460 gcgccttcat tgtgtaccgc aatcgtctgg agcggcagct cgacatcttt gccggtgagc 2520 gtcgcgatac gttgcgccgt aacacgagcg aggccgggtt cgagatcgtc aatcggacca 2580 tcctgatcga ccagagcacc atcctggcca ataacctcag tttcttcttc taggtgatgt 2640 catgacttgg acatacatat tgcggcaggg tgacctcacc cggtgagatg cagcgctacg 2700 aaggcggccc ggaacctgtg atggtctgca acgtcgatgg cgagttcttc gcggtgcagg 2760 atacctgcac gcatggggac tgggcgttgt cggatggtta cctggacggt gatattgtcg 2820 aatgcacgtt gcatttcggc aagttctgcg tgcggaccgg gaaggtgaag gcgctgcctg 2880 cttgcaaacc tatcaaggta ttcccaatca aggtcgaagg cgatgaagtg cacgtcgatc 2940 tcgacaacgg ggagttgaag tgatggctac ccatgtggcg atcatcggca atggcgtggg 3000 tggcttcacg accgcgcagg ccctacgtgc cgagggcttc gaggggagaa tctcgctgat 3060 tggggacgaa ccgcatctcc cctatgaccg accatccttg tccaaggcgg ttctcgacgg 3120 cagccttgag cggccgccca tactggccga ggccgattgg tacggcgagg cccgcatcga 3180 catgctgacc ggcccggaag tcactgccct tgatgtgcag acaaggacga tcagtctgga 3240 tgatggcacc acgctctctg cggacgccat cgtcatcgcg acgggcagtc gagcgcggac 3300 gatggcgttg cccggcagcc aactgcccgg cgtcgtaacg ctgcgcacct acggtgacgt 3360 gcaggtattg cgcgatagtt ggacttccgc gacgcggctg ctgattgtgg gtggcggatt 3420 gatcggctgc gaggtcgcga cgacggcgcg caagctcggc ctgtcggtca cgatcctgga 3480 ggcaggtgat gaactgctgg tccgagtact tgggcggcgt atcggtgcct ggctgcgcgg 3540 cctgctgaca gaacttggtg tgcaggtcga gttgggaacg ggtgtcgtag gtttttctgg 3600 tgagggccag ctcgaacaag tcatggccag cgatgggcgc agcttcgtag ccgatagcgc 3660 actcatttgc gtcggcgcgg agcccgcgga tcaacttgcg cgtcaagcgg gcttggcatg 3720 tgaccgcggc gtcattgtcg atcactgcgg tgcgacgctt gccaaaggct attcgccgtc 3780 ggagatgtgg ccagttggcg ctgcggccgg cggccggcgt tcgctcgaaa cctatatgaa 3840 cgcgcagcgc caagccgccg cggtggctgc ggccattctg gggaaaaacg tatcggcacc 3900 gcaactgccc gtgtcctgga cggagatcgc tgggcatcgc atgcagatgg cgggcgatat 3960 cgaaggacct ggtgatttcg tctcgcgcgg catgcccggt agtggcgctg ccctgttgtt 4020 ccgcctgcag gagcgaagga ttcaggcggt cgtcgcggtc gatgcacccc gtgacttcgc 4080 gcttgcaacc cgattggtag aagcccgcgc ggcaatcgag ccagcacggc tcgcagatct 4140 ttcaaacagt atgcgcgatt ttgttcgtgc gaatgaagga gacctaacgt gagacttgaa 4200 ggcgaagtgg ccttggtgac aggcggtggc gcaggcctgg gcagagcgat cgtggatcgt 4260 tatgtcgcgg aaggtgcgcg tgtcgcggtg ctggataaat ccgcggcagg cctggaagcg 4320 ctcaggaaac tccatggcga tgcaatcgtg ggcgtggagg gggatgttcg ctcgctcgac 4380 agccatcgtg aggctgtggc ccgctgcgtc gaagcgttcg gcaagctgga ctgcctggtt 4440 ggcaatgctg gcgtttggga ctacctgacc caactggtgg atattcccga cgacctcata 4500 tcggaggcat tcgaggaaat gttcgaggtc aatgtcaagg gctacatcct ggcggcaaag 4560 gctgcgctac ctgcgcttta tcagagcaaa ggcagcgcga tattcactgt gtcgaatgcc 4620 ggtttctacc cgggcggtgg cggtgttctg tatacagctg gcaaacatgc cgtgattgga 4680 ttgatcaagc agctcgcgca cgaatggggg ccgcgtatcc gcgtcaacgg catcgccccc 4740 ggtggcattt tggggagcga tctgcgcggg ctgaagagcc ttgatttaca agacaagagc 4800 atttcgacct ttccattgga cgacatgctg aaatccgttc ttccgaccgg gcgggccgcc 4860 actgccgagg aatacgccgg cgcctatgtc ttcttcgcga cgcgcggcga cacggttccg 4920 ctcaccggta gcgtgttgaa cttcgatggc ggcatgggcg tgcgtggctt gttcgaagcc 4980 agcctaggcg cacagctcga caagcacttc ggttgagaca ggagaagtgt catgagcatt 5040 caaagattgg gctacctcgg cttcgaagtc gcagatgtgc gttcatggcg taccttcgcc 5100 actaccaggc tggggatgat gaaagcctca gccagcgaga cggaggcgac gtttcgaatc 5160 gactcacgtg cctggcgact gtcggtcagc agaggccccg cagacgacta cctgtttgcc 5220 ggtttcgagg tggatagtga acaggggcta caggaggtca aggaaagcct gcag 5274 // |
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