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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   M14984; SV 1; linear; genomic DNA; STD; PRO; 1727 BP.
XX
AC   M14984;
XX
DT   02-APR-1988 (Rel. 15, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 3)
XX
DE   S.potsdam hsdS gene encoding specificity peptide of type I restriction and
DE   modification system, complete cds and hsdM protein gene 3' end.
XX
KW   DNA-binding protein; hsdM protein; hsdS protein;
KW   type I restriction and modification system.
XX
OS   Salmonella enterica subsp. enterica serovar Potsdam
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Salmonella.
XX
RN   [1]
RP   1-1727
RX   DOI; 10.1073/pnas.83.24.9368
RX   PUBMED; 3025838.
RA   Fuller-Pace F.V., Murray N.E.;
RT   "Two DNA recognition domains of the specificity polypeptides of a family of
RT   type I restriction enzymes";
RL   Proc. Natl. Acad. Sci. U.S.A. 83(24):9368-9372(1986).
XX
CC   Draft entry and computer-readable sequence for [1] kindly provided
CC   by N.E.Murray, 01-JUN-1987.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1727
FT                   /organism="Salmonella enterica subsp. enterica serovar
FT                   Potsdam"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:597"
FT   CDS             <1..230
FT                   /codon_start=3
FT                   /transl_table=11
FT                   /note="hsdM protein"
FT                   /db_xref="GOA:P07989"
FT                   /db_xref="InterPro:IPR003356"
FT                   /db_xref="UniProtKB/Swiss-Prot:P07989"
FT                   /protein_id="AAA27144.1"
FT                   /translation="IRTAKSDSLDISWLKDKDSIDADSLPEPDVLAAEAMGELVQALGE
FT                   LDALMRELGAGDEADAQRQLLEEAFGGVKA"
FT   CDS             227..1618
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /note="hsdS specificity protein"
FT                   /db_xref="GOA:P07990"
FT                   /db_xref="InterPro:IPR000055"
FT                   /db_xref="UniProtKB/Swiss-Prot:P07990"
FT                   /protein_id="AAA27145.1"
FT                   /translation="MNRGKLPEGWATAPVSTVTTLIRGVTYKKEQALNYLQDDYLPIIR
FT                   ANNIQNGKFDTTDLVFVPKNLVKESQKISPEDIVIAMSSGSKSVVGKSAHQRLPFECSF
FT                   GAFCGALRPEKFISPNYIAHFTKSSFYRNKISSLSAGANINNIKPASFDLINIPIPSLA
FT                   EQKIIAEKLDTLLAQVDSTKARLEQIPQILKRFRQAVLAAAVSGTLTTALRNSHSLIGW
FT                   HSTNLGALIVDSCNGLAKRQGLNGNEITILRLADFKDAQRIIGNERKIKLDSKEENKYS
FT                   LENDDILVIRVNGSADLAGRFIEYKSNGDIEGFCDHFIRLRLDSNKIMSRFLTYIANEG
FT                   EGRFYLRNSLSTSAGQNTINQTSIKGLSFLLPPLKEQAEIVRRVEQLFAYADTIEKQVN
FT                   NALTRVNSLTQSILAKAFRGELTAQWRAENPDLISGKNSAAALLEKIKAERAVSGGKKT
FT                   SRKKA"
XX
SQ   Sequence 1727 BP; 525 A; 380 C; 385 G; 437 T; 0 other;
     ggatccgcac ggccaaatcc gattcgctgg atatctcctg gctgaaggat aaggacagca        60
     tcgacgccga cagcctgccg gagccggacg tgctggcggc agaagcgatg ggtgagctgg       120
     tacaggcgct aggcgaactg gatgcgctga tgcgcgagct gggcgcgggc gatgaggcgg       180
     atgcgcagcg tcagttgctg gaagaagcat ttggtggggt gaaggcatga atagggggaa       240
     actgccggag gggtgggcta cagctccagt atctacagtc acaaccctaa tccgaggagt       300
     cacatataaa aaagagcagg cactcaatta tctacaagat gattatttgc ctattatacg       360
     tgcaaacaat attcaaaatg gcaagtttga tactacagac ttagtttttg tgcctaaaaa       420
     tcttgttaaa gaaagtcaga aaatatctcc tgaagatatt gtaattgcga tgtcttcagg       480
     gagtaaatct gtagtcggta aatccgcaca tcaacgtcta ccatttgaat gtagtttcgg       540
     cgcattttgc ggggcattgc gccctgagaa attcatatct ccaaattaca ttgctcattt       600
     cacaaaatca tccttttatc ggaacaaaat ttcatcactt tctgctggtg caaatattaa       660
     taatattaaa ccagcaagct ttgatttaat aaatatacca atcccgtcac ttgctgaaca       720
     aaaaatcatc gccgaaaaac tcgatacgct gctggcgcag gtagacagca ccaaagcacg       780
     tcttgagcaa atcccgcaaa tcctgaaacg ttttcgtcag gcggtgttag ccgctgcagt       840
     gagtggaaca ctgacaacgg ccctcaggaa cagtcatagc ctcattggct ggcatagtac       900
     aaatctgggt gccttaattg tcgattcctg taatgggctg gctaaaagac aaggattaaa       960
     tggtaatgaa attactattt tgagattggc tgattttaaa gatgctcagc gtataattgg      1020
     caatgaaaga aaaataaaat tagactctaa ggaagaaaat aagtattcat tagaaaatga      1080
     tgatatttta gttataagag tgaatggaag tgcggacttg gctggccgat ttattgaata      1140
     taagtcaaac ggcgatattg aaggtttttg cgatcatttt atacgtttac gcttagattc      1200
     aaataaaatc atgtctagat ttttaactta tattgcaaat gaaggcgagg gtagatttta      1260
     tctacgcaat agtttatcaa caagtgcagg acaaaatact attaaccaaa catcaataaa      1320
     aggacttagt tttttacttc ctccattaaa agaacaagcc gaaatcgtcc gccgcgtcga      1380
     acaactcttc gcctacgccg acaccattga aaaacaggtt aacaacgccc tgacccgcgt      1440
     caacagcctc acccagtcga tcctggcgaa ggccttccgc ggagagctta ccgcccagtg      1500
     gcgtgcggaa aaccctgatc tcatcagcgg taaaaacagc gccgccgccc tgctggaaaa      1560
     aatcaaggcc gaacgcgccg tcagcggcgg taaaaaaacc tcgcgtaaaa aagcctgacg      1620
     cttatttttc tgcgcacctt cccggcttcg ttttattatt tccccgccat cataaccatc      1680
     aagaatatat ccaattcctt cctgaacatt cccattacag tctattt                    1727
//
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