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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   L78064; SV 1; linear; genomic DNA; STD; PRO; 1470 BP.
XX
AC   L78064;
XX
DT   16-MAY-1996 (Rel. 47, Created)
DT   06-JUL-1999 (Rel. 60, Last updated, Version 4)
XX
DE   Methylobacillus flagellatum pqqD and pqqG genes, complete cds, pqqC gene,
DE   5' end.
XX
KW   .
XX
OS   Methylobacillus flagellatus
OC   Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales;
OC   Methylophilaceae; Methylobacillus.
XX
RN   [1]
RP   1-1470
RX   DOI; 10.1016/0378-1097(96)00217-0
RX   PUBMED; 8768519.
RA   Gomelsky M., Biville F., Gasser F., Tsygankov Y.D.;
RT   "Identification and characterization of the pqqDGC gene cluster involved in
RT   pyrroloquinoline quinone production in an obligate methylotroph
RT   Methylobacillus flagellatum";
RL   FEMS Microbiol. Lett. 141(2-3):169-176(1996).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1470
FT                   /organism="Methylobacillus flagellatus"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:405"
FT   RBS             219..227
FT   gene            229..1302
FT                   /gene="pqqD"
FT   CDS             229..303
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="pqqD"
FT                   /note="homologous to Acinetobacter calcoaceticus pqqIV,
FT                   Klebsiella pneumoniae pqqA, Pseudomonas fluorescens pqqA
FT                   and Methylobacterium extorquens AM1 pqqD"
FT                   /db_xref="GOA:Q50436"
FT                   /db_xref="InterPro:IPR011725"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q50436"
FT                   /protein_id="AAB42379.1"
FT                   /translation="MMWTKPEVTEMRFGFEVTMYVCNR"
FT   terminator      325..346
FT                   /gene="pqqD"
FT                   /note="putatve"
FT   RBS             376..379
FT                   /gene="pqqD"
FT   CDS             385..1302
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="pqqD"
FT                   /function="involved in transport of PQQ or its precursor to
FT                   the periplasm"
FT                   /note="homologous to A. calcoaceticus pqqV, K. pneumoniae
FT                   pqqB, P. fluorescens pqqB and M. extorquens pqqG; putative"
FT                   /db_xref="GOA:Q50437"
FT                   /db_xref="InterPro:IPR011842"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q50437"
FT                   /protein_id="AAB42380.1"
FT                   /translation="MHIHVLGSAAGGGFPQWNCNCPNCDGLRKGTIKAKKRTQSSICVS
FT                   ADGINWVLFNTSPDILQQIQEFAPLQPGRAIRDTGVVGIVLIDAQIDHTTGLLMLREGQ
FT                   VKREIYCTDMVYQDLTTGNPLLNILDHYCGVNRHDIPIDGKHSFSVEHAPGLRFTAVAL
FT                   KSAAPPYSPHRHDPHPGDTIGVLIEDLNNGKKAFYAPGLGEIEPHLPALMEQADCIMVD
FT                   GTFWTDTEMLDMGLMSKKARDIGHNPQSGPGGMMEVLDGYPGARRVLIHINNTNPILRE
FT                   DSAERVELTRRGIEVAYDGMDIIL"
FT   RBS             1301..1305
FT   gene            1314..1470
FT                   /gene="pqqC"
FT   CDS             1314..>1470
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="pqqC"
FT                   /db_xref="GOA:Q50438"
FT                   /db_xref="InterPro:IPR004305"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q50438"
FT                   /protein_id="AAB42381.1"
FT                   /translation="MNAPLTDNIPWTREEFEQKLRDKGRGYHIYHPFHVMMYEGKLTRE
FT                   QLQCWVA"
XX
SQ   Sequence 1470 BP; 351 A; 414 C; 393 G; 312 T; 0 other;
     acgcgtacgt aatcatcctc catgatcagg cctcgcaaga ggcctgatta cttccagcct        60
     tgatcgcggc ttggttctgc tcggtcaact catgataatc atgagatgac tttcggtgtt       120
     ttcgcactgt ttcacccgac ttcctcattg cacaatgcac tcacgttgct gtcaggcttg       180
     tttgccgggc ggcagcgata tcaaatcaat tcaatttaaa ggagaagtat gatgtggacc       240
     aagccagaag tcactgaaat gcgtttcggt tttgaagtca ctatgtacgt ttgcaatcgc       300
     taagcgattg taagtgacgt gatcgccggg aaccgaggtt cccggcaatt catcagcaaa       360
     aatcgaattc tacaaaaggc tgatatgcat attcatgttc tagggtcggc agcaggcggc       420
     ggtttcccgc aatggaactg caactgcccg aattgtgacg gcctacgcaa aggcacgatc       480
     aaggcaaaaa aacgcacgca gtcatccatc tgcgtcagtg ccgacggcat caactgggtg       540
     ctgttcaaca cttcccccga cattctgcag caaattcagg aatttgcccc attgcaaccc       600
     ggccgcgcga tccgcgatac gggagtcgtg ggcatcgtgc tgatcgatgc acaaatcgac       660
     catacgacgg gtctcctgat gctacgcgag ggccaggtca agcgcgagat ttactgtacc       720
     gacatggtgt accaggacct gaccaccggc aaccccttgc tcaacattct cgatcattat       780
     tgcggcgtga accgccacga catcccaatt gacgggaaac acagtttcag cgttgagcac       840
     gcgcctggct tacgctttac cgccgttgcc ctgaaaagtg ctgcgccgcc gtattccccg       900
     caccgtcacg atccccatcc gggcgatacc atcggcgtgc tgatcgaaga cctcaataac       960
     ggcaagaagg cattctatgc acccgggctg ggcgagatcg agccccacct gcccgctctg      1020
     atggagcagg cagactgcat catggtggat ggtacgttct ggacggatac cgagatgctc      1080
     gacatgggcc tcatgagcaa gaaggctcgc gacatcggcc ataacccgca gtccggcccc      1140
     ggcggcatga tggaggtgct ggatggctat cccggtgcgc ggcgcgtgct gatccatatc      1200
     aataacacca accccatact gcgggaagat tctgccgaac gtgttgaatt gaccaggcgc      1260
     ggtatcgagg tcgcctacga cggcatggac attattctct aggagcgagc gagatgaatg      1320
     caccactgac agataatatt ccctggacac gcgaagagtt cgagcagaag ctgcgcgaca      1380
     agggtagggg ataccatatc taccacccgt tccacgtgat gatgtatgaa ggcaagctca      1440
     cccgcgagca attgcagtgc tgggtcgcca                                       1470
//
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