EBI Dbfetch

ID   L76417; SV 1; linear; genomic DNA; STD; PRO; 1634 BP.
XX
AC   L76417;
XX
DT   05-APR-1996 (Rel. 47, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 5)
XX
DE   Allochromatium vinosum strain D AICAR transformylase-IMP cyclohydrolase
DE   (purH) gene, partial cds; UDP-N-acetylglucosamine O-acyltransferase (lpxA)
DE   gene, complete cds; and phosphoribosylamine-glycine ligase (purD) gene,
DE   partial cds.
XX
KW   .
XX
OS   Allochromatium vinosum
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae;
OC   Allochromatium.
XX
RN   [1]
RP   1-1634
RX   DOI; 10.1023/A:1007010229151
RX   PUBMED; 10532315.
RA   Chen Y.L., Dincturk H.B., Knaff D.B.;
RT   "An unusual arrangement of pur and lpx genes in the photosynthetic purple
RT   sulfur bacterium Allochromatium vinosum";
RL   Mol. Biol. Rep. 26(3):195-199(1999).
XX
RN   [2]
RP   1-1634
RA   Chen Y.L., Knaff D.B.;
RT   ;
RL   Submitted (22-NOV-1999) to the EMBL/GenBank/DDBJ databases.
RL   Department of Chemistry and Biochemistry, Texas Tech University, Lubbock,
RL   TX 79409, USA
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1634
FT                   /organism="Allochromatium vinosum"
FT                   /strain="D"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1049"
FT   CDS             <1..238
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /gene="purH"
FT                   /product="AICAR transformylase-IMP cyclohydrolase"
FT                   /function="purine nucleotide biosynthesis"
FT                   /db_xref="GOA:Q46480"
FT                   /db_xref="HSSP:1G8M"
FT                   /db_xref="InterPro:IPR002695"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q46480"
FT                   /protein_id="AAB02978.1"
FT                   /translation="NSARIAAIKAEHAGLTVAGSVMASDAFFPFRDGIDQAAAAGIKAV
FT                   IQPGGSMRDAEVIAAANEHGMAMVFTGMRHFRH"
FT   RBS             231..239
FT                   /gene="lpxA"
FT                   /note="putative"
FT   misc_feature    239..244
FT                   /gene="lpxA"
FT                   /note="intercistronic space"
FT   CDS             245..1024
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="lpxA"
FT                   /product="UDP-N-acetylglucosamine O-acyltransferase"
FT                   /function="lipid A biosynthesis"
FT                   /db_xref="GOA:Q46481"
FT                   /db_xref="HSSP:1LXA"
FT                   /db_xref="InterPro:IPR010137"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q46481"
FT                   /protein_id="AAB02979.1"
FT                   /translation="MRIHPTAIVEDGAQLHDSVTVGPYSIIESGAVIGEGCRIESNVRI
FT                   FGVTRMGAHNRVCHGATLGSEPQDLSFTPEKARPLIIGDHNHFKECVNISGGIKSEGGT
FT                   RIGSHNYWMAFSHAGHDCVVGDHNVFANTATLAGHVEIDDHCFLSGQVAVHQFCRIGSY
FT                   VMIAGVTGVPQDVPPYMLADGHRARLIGLNVVGLRRNGFGQEQRTAIKQVYRLILRSGL
FT                   RLDDALQRIAEDEYPGPETKRIVAFIRASRRGIVSFG"
FT   misc_feature    1025..1067
FT                   /note="intercistronic space"
FT   RBS             1054..1062
FT                   /gene="purD"
FT                   /note="putative"
FT   CDS             1068..>1634
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="purD"
FT                   /product="phosphoribosylamine-glycine ligase"
FT                   /function="purine nucleotide biosynthesis"
FT                   /db_xref="GOA:Q46482"
FT                   /db_xref="HSSP:1GSO"
FT                   /db_xref="InterPro:IPR013817"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q46482"
FT                   /protein_id="AAB02980.1"
FT                   /translation="MKILIVGSGGREHALAWKAAQSPQVEQVFVAPGNGGTASEPGVEN
FT                   VAIAADDIAGLVEFARRESIGLTIVGPEAPLVLGLVDAFAEAGLPCFGPASGSAQLEGS
FT                   KAFAKDFLHRHGIPTAAYGVFTELEPALAYLRQVGAPVVVKADGLAAGKGVILAMILAT
FT                   AGGGVHDMLGADAFGPGGGGVVIEEF"
XX
SQ   Sequence 1634 BP; 281 A; 548 C; 536 G; 269 T; 0 other;
     gaattccgcg cgcatcgccg ccatcaaggc cgagcacgcc ggactgaccg tcgccggatc        60
     ggtgatggcc tcggatgcct tcttcccctt ccgcgacggc atcgatcaag cggccgccgc       120
     cggcatcaag gccgtcatcc agcccggcgg ctcgatgcgc gacgccgagg tcatcgcggc       180
     ggccaacgag catggcatgg ccatggtgtt caccggcatg cgtcacttca ggcactgaaa       240
     acccatgcgc atccatccaa cggccatcgt cgaggacggc gcccaactgc acgacagcgt       300
     gacggtcggt ccctattcga tcatcgaatc cggggccgtc atcggcgagg gctgccgcat       360
     cgagagcaac gtgcgcatct tcggcgtcac ccggatgggt gcgcacaacc gagtctgtca       420
     tggcgcgacc ctgggttccg aaccgcagga tctgagcttc acgcccgaga aggcccggcc       480
     gctgatcatc ggcgatcaca accacttcaa ggagtgcgtc aatatcagcg gcgggatcaa       540
     gtccgagggc ggcacccgga tcggcagcca caattattgg atggccttca gccacgccgg       600
     acacgactgc gtcgtcggcg atcacaatgt cttcgccaac accgcgaccc tggccgggca       660
     tgtcgagatc gacgaccact gctttctctc cggtcaggtg gcggtgcatc agttctgccg       720
     catcggctcc tatgtcatga tcgcgggcgt gacgggcgtg ccccaggacg taccgcccta       780
     catgctcgcc gacggccatc gcgcgcgcct gatcggactc aacgtggtgg ggctgagacg       840
     caacggcttc ggtcaggaac agcgcacggc catcaagcag gtctatcgtt tgatcctgcg       900
     ctccggtctg cgcctggacg atgcactcca gcgcatcgcc gaggacgagt atcccggacc       960
     cgagaccaag cggatcgtcg ccttcattcg tgccagccgg cgcggtatcg tgtcgttcgg      1020
     ttgaagcgga cgcgatccga acccaaaacc acagatttga aataccgatg aagatcttga      1080
     tcgtaggcag tggcgggcgc gagcacgccc tggcctggaa agcggcccaa tccccccagg      1140
     tcgaacaggt gttcgtggcc cccggcaatg gcggcacggc gagcgagccg ggcgtggaga      1200
     acgtggccat cgccgccgac gacatcgccg gactggtcga gttcgcacgc cgcgagtcga      1260
     tcgggctgac catcgtcggc ccggaggcgc cgctggtgct gggtctggtc gatgccttcg      1320
     ccgaggcggg gctaccctgc ttcgggccag cgtcagggtc ggcccaactg gaaggctcca      1380
     aggcgttcgc caaggacttc ctgcaccgtc acggcatccc gaccgctgcc tatggcgtct      1440
     tcaccgagct ggagccggcg ctcgcctatc tgcgtcaggt cggcgcgccc gtggtggtca      1500
     aggccgatgg tctggccgcc ggcaagggcg tgatcctggc gatgatcctg gccacggccg      1560
     gaggcggcgt gcacgacatg ctcggcgcgg acgctttcgg gcccggaggc ggcggcgtcg      1620
     tgatcgagga attc                                                        1634
//