EBI Dbfetch

ID   L42367; SV 1; linear; genomic DNA; STD; PRO; 1936 BP.
XX
AC   L42367;
XX
DT   12-JUL-1995 (Rel. 44, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 5)
XX
DE   Bacteroides thetaiotaomicron lyase 2 gene, complete cds.
XX
KW   lyase.
XX
OS   Bacteroides thetaiotaomicron
OC   Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae;
OC   Bacteroides.
XX
RN   [1]
RP   1-1936
RX   PUBMED; 7601836.
RA   Cheng Q., Yu M.C., Reeves A.R., Salyers A.A.;
RT   "Identification and characterization of a Bacteroides gene, csuF, which
RT   encodes an outer membrane protein that is essential for growth on
RT   chondroitin sulfate";
RL   J. Bacteriol. 177(13):3721-3727(1995).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1936
FT                   /organism="Bacteroides thetaiotaomicron"
FT                   /strain="5482"
FT                   /isolate="BT4001"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:818"
FT   CDS             <1..>1936
FT                   /codon_start=2
FT                   /transl_table=11
FT                   /product="lyase 2"
FT                   /db_xref="GOA:Q45773"
FT                   /db_xref="HSSP:1HN0"
FT                   /db_xref="InterPro:IPR015177"
FT                   /db_xref="UniProtKB/TrEMBL:Q45773"
FT                   /protein_id="AAA99039.1"
FT                   /translation="ISKRCLPVLHTMPSTIRMRHRRRTILPYSTMQWIRDSLLAAAWGR
FT                   IIITAIRYVKYILPPGSCGTIYKHPHRDAYLSTLRFWAALQETRQPCSAGADELLDSWH
FT                   TLLMAKFISAMMFPDAREQEQALNGLSRWLSSSLNYTPGTLGGIKVDGTTFHHGGFYPG
FT                   YTTGVLATIGQFIALTNGTGFELTEEARQHIKSAFLAMANYCNLYEWGTGISGRHPFGG
FT                   KMGSDDIEAFANIALSGDLSGQGNTFDHGLAADYLRLIRDRNTRNAHFFRKEGIQPAQR
FT                   PHGFFVYNYGSAGIFRRADWMVTLKGYTTDVWGAEIYAKDNRYGRYQSYGSVQIMGKGN
FT                   PVSRAGSGFVQEGWDWNRLPGTTTIHLPFELLDSPLKGTTMARSTENFSGSSSLGGMNG
FT                   MFAMKLTERDYENFTPDFVARKSVFCFDNRMICLGTGITNSNADYPTETTLFQTKFNGK
FT                   EQKTGKDNYWFARGYDNYYHVVDGTLRSQIAEQESRHEKTREKTTGTFSSPGLNMATPK
FT                   NATYEYMVLIQPSASDLDELKKTPAYEVWQRDQTAHIVYDRKTGITGYAVFEDYRSADD
FT                   KLVVASIPAETMVMYAAEGKKAIRLSVCDPNLNIAEKTYTTKEPSRPIRKIIELKGRWS
FT                   FLETPANVKL"
XX
SQ   Sequence 1936 BP; 530 A; 428 C; 483 G; 495 T; 0 other;
     gatatcgaaa cgatgcttgc cggttttgca tacgatgcct tctacaatca gaatgagaca        60
     tcgaagaaga actattttac cgtattcgac tatgcaatgg atcagggatt cgcttttggc       120
     agcggcatgg ggacgaatca tcattacggc tatcaggtac gtaaaatata tactaccgcc       180
     tggctcatgc gggacgattt ataaacatcc tcaccgggat gcctatctat ccactttacg       240
     tttctgggct gctttacagg agactcgtca accgtgttcc gccggagcgg atgaattact       300
     ggattcatgg catacgctct tgatggcaaa gtttatctcc gccatgatgt tccccgatgc       360
     aagagaacag gaacaggctt tgaatggttt gtcgcgctgg ttgtcttcat cgctgaatta       420
     tactccgggc actctcggcg gtatcaaagt agatggaacg acctttcatc acggaggttt       480
     ctatcccggc tatacaaccg gagtactggc taccatcggt caatttatcg ctctcaccaa       540
     cgggactgga tttgaactga cggaagaggc acgtcaacat atcaagtctg cctttctcgc       600
     catggccaat tattgtaacc tttacgaatg ggggacaggc attagcggtc gccatccttt       660
     tggcggaaag atgggaagcg atgatataga agcatttgcc aatattgcat tgtcaggaga       720
     cttgtccggt cagggaaata cattcgatca tggactggcc gccgattatt tgcgtctgat       780
     acgtgatcgg aatacaagga atgcacattt cttcagaaaa gaaggtattc agcctgcaca       840
     gcgtccccac ggtttttttg tttataacta tggatcggca ggtattttcc gccgtgcaga       900
     ctggatggtg acactgaaag gatataccac agatgtatgg ggtgctgaaa tctatgcgaa       960
     agataatcgt tacggacgtt atcaaagcta cggatcggta cagattatgg gaaaaggaaa      1020
     tcccgtctcc cgtgccggaa gtggttttgt acaggaagga tgggactgga accgtctgcc      1080
     cggtacgact accattcatc ttccttttga actcttggac agtcccctga aaggtacgac      1140
     gatggcacgg tctacggaaa acttttccgg aagcagctct ttaggcggca tgaacggaat      1200
     gtttgcaatg aaactgacgg aacgtgatta tgagaacttt actcccgact ttgtagcccg      1260
     taaatccgtc ttctgttttg ataaccggat gatctgcctc ggaacaggca tcacgaacag      1320
     caatgctgac tatcctacgg agaccactct cttccagacg aaatttaacg gcaaagagca      1380
     gaagacaggt aaggataact attggtttgc acgcggctat gataattatt atcatgtagt      1440
     tgacggaacc cttcgttcac agatagccga acaggagtcg cgtcatgaga aaacccgcga      1500
     aaagactaca ggaacattct cttctcctgg attgaacatg gcaaccccga agaatgctac      1560
     ttatgaatat atggtactga ttcagccttc agcttcggat ttggatgaac tgaagaaaac      1620
     gcctgcatac gaagtatggc aacgtgatca gactgcgcat attgtctatg acaggaaaac      1680
     gggtataacc ggatatgctg tttttgaaga ttaccggtct gctgacgata agctggtggt      1740
     tgcttccatt cctgcggaaa cgatggtcat gtatgcggca gagggaaaaa aggcgattcg      1800
     tctcagcgtc tgtgacccaa acttgaatat tgcggaaaag acgtatacga caaaagaacc      1860
     gagccgccct attcgtaaaa taatagagct gaaaggacgc tggagtttct tggagacacc      1920
     ggcgaatgta aagctt                                                      1936
//