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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   L41673; SV 1; linear; genomic DNA; STD; PRO; 1293 BP.
XX
AC   L41673;
XX
DT   19-FEB-1996 (Rel. 46, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Pseudomonas fluorescens pectate lyase (pel) gene, complete cds.
XX
KW   pectate lyase.
XX
OS   Pseudomonas fluorescens
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
XX
RN   [1]
RP   1-1293
RX   PUBMED; 8589419.
RA   Liao C.H., Gaffney T.D., Bradley S.P., Wong L.C.;
RT   "Cloning of a pectate lyase gene from Xanthomonas campestris pv.
RT   malvacearum and comparison of its sequence relationship with pel genes of
RT   soft-rot Erwinia and Pseudomonas";
RL   Mol. Plant Microbe Interact. 9(1):14-21(1996).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1293
FT                   /organism="Pseudomonas fluorescens"
FT                   /strain="CY091"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:294"
FT   gene            61..1203
FT                   /gene="pel"
FT   CDS             61..1203
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="pel"
FT                   /product="pectate lyase"
FT                   /db_xref="GOA:Q59671"
FT                   /db_xref="InterPro:IPR002022"
FT                   /db_xref="InterPro:IPR006626"
FT                   /db_xref="InterPro:IPR011050"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q59671"
FT                   /protein_id="AAA93535.1"
FT                   /translation="MTNPSTFTASKLASAVIGALLLSSVPAHAADIWLDSATTGWATQN
FT                   GGTKGGSRAAANNIYTAKNAAELKTALKASVGANGRIIKITGIIDISEGKAYTTTADMK
FT                   VRGRLDIPGKTTIVGTTSNAEIREGFLYAKENDVIIRNITIENPWDPEPKWDPTDGSAG
FT                   NWNSEYDGLTIEGANNVWVDHVTFTDGRRTDDQNGTANGRPKQHHDGALDVKNGANYVT
FT                   ISYSAFKSHEKNNLIGSSDSRTTDDGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYH
FT                   VGSTSHKVYPFSYAHGMGKNSKIFSERNAFEISGISGCDKIAGDYGGNVYRDTGSTVNG
FT                   TALTCPWSTNIGWTPPYSYTPLAADKVAADVKAKAGAGKL"
XX
SQ   Sequence 1293 BP; 312 A; 408 C; 345 G; 228 T; 0 other;
     gagaaacgcg catgcctgtg cgcgtttaaa cactcaagtt aatcaaggat ctgattactc        60
     atgacaaacc cctcaacctt cactgcctcc aaactggcca gtgccgttat cggtgccctg       120
     ctgttgtcca gcgttcctgc gcatgctgcg gacatttggc tggattcagc caccaccggc       180
     tgggccactc aaaacggcgg caccaagggc ggctcacgag ctgcggcgaa taatatctac       240
     acggcaaaaa acgcggctga gttgaaaacc gcgctgaagg cttcggtggg agccaacggc       300
     cggatcatca aaatcaccgg catcatcgat atcagcgaag gcaaggctta tacgaccact       360
     gctgatatga aggtacgcgg tcgcctggat attcctggca aaaccaccat cgtcggtacc       420
     accagcaatg ccgaaatccg cgagggtttc ctctatgcca aggaaaacga cgtcatcatc       480
     cgcaacatca ccatcgaaaa cccttgggat cccgagccga agtgggaccc tactgacggc       540
     agcgccggca actggaactc ggaatacgac ggcctgacca ttgaaggcgc caacaacgtg       600
     tgggtcgatc acgtgacctt caccgatggc cgccgtaccg atgaccagaa cggcaccgcc       660
     aacggccgtc cgaagcagca tcacgacggc gcgctggatg ttaaaaacgg cgccaactac       720
     gtgaccatct cgtactcggc gttcaagtcc cacgagaaga acaacctgat cggttccagc       780
     gacagccgca ccaccgatga cggcaagctc aaggtcacca tccacaacac cctgtttgag       840
     aatatctctg cccgtgcgcc gcgcgtgcgt ttcggccagg tgcacctgta caacaactac       900
     catgtgggca gcaccagcca taaggtgtac ccgttctcgt acgcccatgg catgggcaag       960
     aactcgaaga tcttctccga gcgcaatgcc ttcgagatca gcggtatcag cggttgcgac      1020
     aagatcgccg gcgattacgg tggcaacgtc tatcgcgaca ccggctcgac cgtcaacggc      1080
     actgcattga cctgcccgtg gagcacgaac atcggctgga ccccgccgta cagctacacc      1140
     ccgctggctg ccgataaggt cgccgccgac gtcaaggcca aggccggcgc cggcaagctc      1200
     taagcagcac cgtcacccgt gaaatgagaa gccctcggtg acgagggttt tttgtgcagc      1260
     tactgcacca gttggttgat ctcgatgatc ggc                                   1293
//
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