EBI Dbfetch

ID   L39866; SV 1; linear; genomic DNA; STD; PRO; 1507 BP.
XX
AC   L39866;
XX
DT   05-SEP-1995 (Rel. 45, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 5)
XX
DE   Dictyoglomus thermophilum beta-1,4-xylanase (xynA) gene, complete cds.
XX
KW   beta-1,4-xylanase; xynA gene.
XX
OS   Dictyoglomus thermophilum
OC   Bacteria; Dictyoglomi; Dictyoglomales; Dictyoglomaceae; Dictyoglomus.
XX
RN   [1]
RP   1-1507
RX   PUBMED; 8534104.
RA   Gibbs M.D., Reeves R.A., Bergquist P.L.;
RT   "Cloning, sequencing, and expression of a xylanase gene from the extreme
RT   thermophile Dictyoglomus thermophilum Rt46B.1 and activity of the enzyme on
RT   fiber-bound substrate";
RL   Appl. Environ. Microbiol. 61(12):4403-4408(1995).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1507
FT                   /organism="Dictyoglomus thermophilum"
FT                   /strain="Rt46B.1"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:14"
FT   CDS             <1..198
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /note="orf1"
FT                   /db_xref="GOA:Q00633"
FT                   /db_xref="UniProtKB/TrEMBL:Q00633"
FT                   /protein_id="AAA96977.1"
FT                   /translation="KLEELLLGDLKKEGYDVFYQYVYIKRNFRFAERIKSLMKDYKSIF
FT                   VVIGAGHLIGEENVVKLLQN"
FT   CDS             244..1302
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="xynA"
FT                   /product="beta-1,4-xylanase"
FT                   /EC_number="3.2.1.8"
FT                   /db_xref="GOA:Q12603"
FT                   /db_xref="InterPro:IPR001000"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="InterPro:IPR017853"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q12603"
FT                   /protein_id="AAA96979.1"
FT                   /translation="MINQRFSILVLLLILLTFSLGFLKEEAKGMEIPSLKEVYKDYFTI
FT                   GAAVSHLNIYHYENLLKKHFNSLTPENQMKWEVIHPKPYVYDFGPADEIVDFAMKNGMK
FT                   VRGHTLVWHNQTPGWVYAGTKDEILARLKEHIKEVVGHYKGKVYAWDVVNEALSDNPNE
FT                   FLRRAPWYDICGEEVIEKAFIWAHEVDPDAKLFYNDYNLEDPIKREKAYKLVKKLKDKG
FT                   VPIHGIGIQGHWTLAWPTPKMLEDSIKRFAELGVEVQVTEFDISIYYDRNENNNFKVPP
FT                   EDRLERQAQLYKEAFEILRKYKGIVTGVTFWGVADDYTWLYFWPVRGREDYPLLFDKNH
FT                   NPKKAFWEIVKF"
FT   CDS             1321..>1507
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /note="orf3"
FT                   /db_xref="GOA:Q00634"
FT                   /db_xref="UniProtKB/TrEMBL:Q00634"
FT                   /protein_id="AAA96978.1"
FT                   /translation="MRKLLRFLIFSLLVLGLSFNIILAETEKYVDKNLGFSIVPPEGWE
FT                   VKDGKPYNLAVIFVGPA"
XX
SQ   Sequence 1507 BP; 500 A; 167 C; 343 G; 497 T; 0 other;
     aagcttgagg aattgttgtt gggtgatttg aagaaagaag gttatgatgt attttaccaa        60
     tatgtctata ttaaaaggaa ttttagattt gcggaaagaa taaagagcct aatgaaagat       120
     tacaaatcta tatttgtggt aataggtgca ggtcatttaa taggtgaaga aaacgtggta       180
     aaattattac aaaattaggg gttaaagtaa gtaaaatttt aatggaaagg ggatgatggt       240
     aaaatgatta accaaaggtt ttctatcctt gtgcttcttc taattttgct cactttctca       300
     ttaggatttt taaaggagga ggctaaaggt atggagattc catcactgaa agaagtttat       360
     aaagattact ttactattgg agcggcagtt agtcacttaa atatttatca ttatgagaat       420
     cttttgaaga agcattttaa tagtttaact cctgaaaatc aaatgaaatg ggaagttatt       480
     catcctaaac catatgttta tgattttgga cctgccgatg agatcgtaga ttttgcaatg       540
     aagaatggta tgaaggtaag agggcatact ttggtttggc ataatcagac tccaggatgg       600
     gtttatgcag gtacaaagga tgaaattctt gcaagattaa aggaacacat taaagaggta       660
     gtaggacatt ataaaggtaa agtttatgct tgggatgtgg ttaacgaggc cttatcggat       720
     aatcctaatg aatttttgag aagagctcct tggtatgata tttgtggtga agaagttatt       780
     gaaaaggcat ttatttgggc tcatgaggta gatcctgatg ctaaattatt ttataacgat       840
     tacaatttag aagatcctat aaagagagaa aaggcttata aattagttaa gaagctcaag       900
     gataaaggag ttcctattca tggtattgga atacagggac attggacatt agcatggcca       960
     actccaaaga tgcttgagga ttccataaag agatttgcag agcttggagt tgaagtacaa      1020
     gttacagagt ttgatatttc tatttactac gatagaaatg aaaataataa ttttaaggtt      1080
     ccgcctgaag ataggcttga aagacaagct cagctttata aggaggcttt tgaaatctta      1140
     agaaaataca aaggaatagt tactggtgtt actttctggg gtgtagcaga tgactatact      1200
     tggctctatt tctggcctgt tagaggaaga gaagattatc cattactctt tgataagaat      1260
     cacaatccta agaaggcttt ctgggagatt gtaaagtttt aggttgtata ggaggtttaa      1320
     atgagaaaat tattaaggtt tttgattttt tctctattag ttttaggact ttctttcaat      1380
     attattttag ctgagactga gaaatatgtg gataagaatt taggtttttc tattgtgcct      1440
     cctgaagggt gggaggtaaa ggatggaaag ccttataact tggctgtaat ttttgttggc      1500
     cctgcag                                                                1507
//