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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   L38573; SV 1; linear; genomic DNA; STD; PRO; 1840 BP.
XX
AC   L38573;
XX
DT   19-FEB-1996 (Rel. 46, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 5)
XX
DE   Xanthomonas campestris pv. malvacearum pectate lyase (PSTRU-3) gene,
DE   complete cds.
XX
KW   pectate lyase.
XX
OS   Xanthomonas campestris
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales;
OC   Xanthomonadaceae; Xanthomonas.
XX
RN   [1]
RP   1-1840
RX   PUBMED; 8589419.
RA   Liao C.H., Gaffney T.D., Bradley S.P., Wong L.C.;
RT   "Cloning of a pectate lyase gene from Xanthomonas campestris pv.
RT   malvacearum and comparison of its sequence relationship with pel genes of
RT   soft-rot Erwinia and Pseudomonas";
RL   Mol. Plant Microbe Interact. 9(1):14-21(1996).
XX
CC   NCBI gi: 1197028
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1840
FT                   /organism="Xanthomonas campestris"
FT                   /strain="pv. malvacearum"
FT                   /isolate="B-414"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:339"
FT   CDS             250..1383
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="PSTRU-3"
FT                   /product="pectate lyase"
FT                   /db_xref="GOA:Q56806"
FT                   /db_xref="HSSP:1JRG"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q56806"
FT                   /protein_id="AAC41522.1"
FT                   /translation="MKPKFSTAAAASLFVGSLLVVGVACADPALEVATTGWATQNGGTK
FT                   GGSKAAAANIYTVKTAAELKSALKASVGSNGRIIKISGIIDVSEGKPYTTTSDMKSRAR
FT                   LDIPTKTTLIGITSNAEIREGYFYVKANDVIIRNITIENPWDPEPVWDPDDGSAGNWNS
FT                   EYDGLTVEGATNVWVDHVTFTDGRRTDDQNGTANGRPKQHHDGAMDVKKGANFVTISYS
FT                   AFKSHEKNDLIGSSDSASSTDSGKLKVTIHNTLFENISARAPRVRFGQVHLYNNYHVGS
FT                   TSNKVYPFSHAHGVGKESKIFSERNVFDISGVSSCDKIAADYGGSVYRDQGSLLNGKAL
FT                   TCSWNSNIGWTPPYTYSLLSADKVAADVKAKAGAGKL"
XX
SQ   Sequence 1840 BP; 377 A; 574 C; 556 G; 333 T; 0 other;
     ctgcagtgtc ctcgcgattg tctccacgtg tcttgattac agcgttttgt cttctcttgc        60
     gtgtcccgca accgtttgcg tgactgcgcg tgcacatcga tgcatcggct agatacaagc       120
     cattgcgatg ctcctagtat cggcgtcgcg gaactgaaca ttacagagat gaaaagtatg       180
     ttccgcgcct gctagacgag gggtgtgccg ccgcgcggcg catcgaaccc attcgaggga       240
     gacatcaaga tgaagccgaa attttcaacg gcggccgccg cgtcgctgtt tgtcgggtcg       300
     ttgctggtcg ttggcgttgc ctgcgccgat cctgcactgg aagttgcaac cactggttgg       360
     gcaacccaga acgggggaac caagggcggc tccaaggcgg ccgctgccaa catctacacg       420
     gtcaagactg ccgccgagct gaagagcgcg ctgaaagcca gcgtgggcag caacgggcgc       480
     atcatcaaga tcagcggcat catcgatgtc agtgagggca aaccgtacac cacgacctcg       540
     gatatgaaga gccgcgcgcg gctggacatc ccgaccaaga ccacgctgat cggcatcacc       600
     agcaacgcgg aaattcgcga aggctatttc tacgtcaagg ccaacgacgt gatcatccgc       660
     aacatcacca tcgaaaatcc atgggatccg gagccggtct gggacccgga tgacggcagt       720
     gccggcaact ggaattctga gtacgacggc ctcacggtcg agggtgcgac caatgtgtgg       780
     gtggaccatg tcaccttcac cgacggtcgc cgcaccgacg atcagaacgg caccgccaac       840
     ggacgcccca agcagcatca tgacggtgcg atggacgtca agaagggcgc caacttcgtc       900
     accatttcct actcggcgtt caagtcgcac gagaagaacg acctgatcgg ctccagcgac       960
     agcgcctcca gcaccgacag cggcaagctc aaggtgacca tccacaacac cttgttcgag      1020
     aacatttccg cacgcgcgcc gcgggtgcgc ttcggccagg tgcacctgta caacaactac      1080
     cacgtcggca gcaccagcaa taaggtctac ccgttctcgc acgcgcacgg cgtgggcaag      1140
     gagtccaaga tcttctccga gcgcaacgtg ttcgacatca gtggggtgag cagctgcgac      1200
     aagattgcgg ccgattacgg cggcagcgtg taccgcgacc agggctcact gctcaacggc      1260
     aaggcactga cctgctcgtg gaatagcaac atcggttgga ccccgccgta cacctatagc      1320
     ctgctgtcgg ccgacaaggt cgctgcggac gtcaaggcaa aagccggcgc aggcaagctg      1380
     taaggcgtct gccacatgca acgcatgcag cgttgcatct gtttccgcaa cgcccgcaac      1440
     actgcgggcg ttgtgcgttt tggcggcgtt agatcttggc gcgttgctcg cgtaggccgg      1500
     tcagctgcgt ggtccagtcg ttcaggcgcg cacgctcctg ttcgaccacc acggccggtg      1560
     cgttctgcac gaaggtggcg ttgcccagct tgccattgca cttgccgatc tcgccttcca      1620
     cgcgcttgat ttccttgtcc aggcgcgtgc gttcggcatc catgtcgacc aggccttcca      1680
     gcggcaccag cagggtcagc tcaccgacga tggccgtggc cgacggcggg gtgtcctggc      1740
     cggcctccag ccagtcgatc gcttcgagtt tgagcaggaa cgacagctgc gaggcaaagc      1800
     ggccaatacg ggtgcgatcg tcggcagtgc cggcctgcag                            1840
//
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