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EBI DbfetchID L37762; SV 1; linear; genomic DNA; STD; INV; 3202 BP. XX AC L37762; XX DT 13-DEC-1994 (Rel. 42, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 12) XX DE Schistosoma mansoni (strain NMRI) glutathione peroxidase (GPX1) gene, DE complete cds. XX KW . XX OS Schistosoma mansoni OC Eukaryota; Metazoa; Platyhelminthes; Trematoda; Digenea; Strigeidida; OC Schistosomatoidea; Schistosomatidae; Schistosoma. XX RN [1] RP 1-3202 RX DOI; 10.1006/expr.1995.1038 RX PUBMED; 7895842. RA Mei H., LoVerde P.T.; RT "Schistosoma mansoni: cloning the gene encoding glutathione peroxidase"; RL Exp. Parasitol. 80(2):319-322(1995). XX DR RFAM; RF00031; SECIS. XX CC On Dec 8, 1994 this sequence version replaced gi:598380. XX FH Key Location/Qualifiers FH FT source 1..3202 FT /organism="Schistosoma mansoni" FT /strain="NMRI" FT /mol_type="genomic DNA" FT /dev_stage="adult" FT /clone_lib="EMBL 3" FT /clone="G21" FT /db_xref="taxon:6183" FT CAAT_signal 5..9 FT CAAT_signal 180..183 FT CAAT_signal 194..197 FT misc_signal 467..477 FT /note="initiator element" FT CAAT_signal 494..498 FT CAAT_signal 508..511 FT exon 578..818 FT /gene="GPX1" FT /number=1 FT mRNA join(578..818,852..937,989..1133,1166..1314,1345..1429, FT 2868..3086) FT /gene="GPX1" FT /product="glutathione peroxidase" FT CDS join(816..818,852..937,989..1133,1166..1314,1345..1429, FT 2868..2909) FT /codon_start=1 FT /transl_except=(pos:1026..1028,aa:OTHER) FT /gene="GPX1" FT /product="glutathione peroxidase" FT /note="selenocysteine" FT /db_xref="GOA:Q00277" FT /db_xref="InterPro:IPR000889" FT /db_xref="InterPro:IPR012335" FT /db_xref="InterPro:IPR012336" FT /db_xref="PDB:2V1M" FT /db_xref="PDB:2WGR" FT /db_xref="UniProtKB/Swiss-Prot:Q00277" FT /protein_id="AAC14468.2" FT /translation="MSSSHKSWNSIYEFTVKDINGVDVSLEKYRGHVCLIVNVACKXGA FT TDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKI FT KVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIEGDIM FT ELLEKK" FT intron 819..851 FT /gene="GPX1" FT /number=1 FT exon 852..937 FT /gene="GPX1" FT /number=2 FT intron 938..988 FT /gene="GPX1" FT /number=2 FT exon 989..1133 FT /gene="GPX1" FT /number=3 FT /note="selenocysteine (SeC)" FT intron 1134..1165 FT /gene="GPX1" FT /number=3 FT exon 1166..1314 FT /gene="GPX1" FT /number=4 FT intron 1315..1344 FT /gene="GPX1" FT /number=4 FT exon 1345..1429 FT /gene="GPX1" FT /number=5 FT intron 1430..2867 FT /gene="GPX1" FT /number=5 FT exon 2868..3086 FT /gene="GPX1" FT /number=6 FT polyA_signal 3066..3071 FT /gene="GPX1" FT polyA_site 3086 FT /gene="GPX1" XX SQ Sequence 3202 BP; 955 A; 602 C; 606 G; 1039 T; 0 other; taaacaaatg gaaaggagag cacagcacag agttggtgtt agaattctgt tcggtggcct 60 atgcactaat aggggtaaca gccttaagca agcgacgaac tctaaatgaa cagttgagta 120 acaaattcta tccactaatt actagcactt tggctcggcc cgtctagaat atggaggcgc 180 aataagtttt cctcaatcat aaaaatgagg aatattatag aatgcatttc aggtcggtca 240 acgatatcag ttaagagatt caaattcaac cctcacaaag aacgccctga atgtctgaat 300 cgttagtcac tggagtacaa acaacttaaa agtgaccttt aaatgacaca cggcatccca 360 agcactcctg gacatccatt aaaataccta tttacgctcg actccaaccc acattcagga 420 agaatatcca gaaattagaa tcacaacata acagaatgaa ctgtaggcac acattctgct 480 ctttacgagc agtcaaatgc tggaattcaa tgacggttga cgtggtccaa gaagtttcct 540 acaagctctt ttagaagaaa cttgatcagt acttaatgat tcgagaatgc attttgtact 600 aatttacata gacctctctg actagttttt cacacatcca gatcctcacc tgtgtacata 660 cgtgatcaat tgctacagat caaggaggct tcttgaccga attctgcctc gattctgttc 720 ccgaccattt gaaacacttg tacaccagcc tagaggtgtt ttgccgctcc ttattcaaat 780 ctctcgaaac attgttcacg attagatgta acgcgatggt acgttgtggt ccctctaatt 840 tcttccttaa gtcttcatct cacaagtctt ggaattcaat atatgaattc actgttaagg 900 atatcaatgg tgtggatgtc tccttagaga aataccggta tgttcgatat tactctccta 960 tatagaataa taattatttg ttgtttagtg gtcacgtttg tctaattgtt aatgtcgctt 1020 gcaagtgagg cgcaacggac aagaactatc gccaactcca ggagatgcac actcgactgg 1080 ttggcaaagg cctccgtata ttagcattcc cctgcaatca attcggtgga caggtgtgta 1140 tcacttaaac caatattatt tgcaggaacc ctgggcagaa gcggagatta agaagttcgt 1200 gactgagaag tacggcgtcc aattcgatat gttttcgaag ataaaagtca atgggtctga 1260 cgctgatgat ctttataaat tcctcaaaag tagacaacat ggtaccttaa caaagtaatt 1320 gttttttctt tgttactgtc gtagtaatat taagtggaac ttctcaaaat ttcttgtaga 1380 tcgtcaagga caaccggtta aaagatattc tcctacaact gccccatatg tgagttgttg 1440 aatttcaata ttttgatttt attatcagtt ccgactgtct aaatagatag aagtaactta 1500 aggataaatt agcaaactca gcaatctatc ctatacactt cgatttttcc tgggttattg 1560 aaatattttg tcgtgctatt tcttaagcat gtaacttgta gtcacttatt ggatgcgtta 1620 acttccgtct gatgatatgt agacgtaaag catggttcat aaacaaatca cttaaggtca 1680 catatagttt acatcacaag aaatcagtgt taaaacacgt ccaaacaaac actagtaacg 1740 tatacaacat cagaaattga ggagcgaaat attcacaatt gaaatatagt tattgcctcc 1800 gcttggttga tcgcaagcaa tgtcgtcagg ccacgtcacg tagcttatag tctctgtggt 1860 tttgatgttg ttattaagaa ggtttaatgt tctgaacatt tagccggtta gtgactttgt 1920 tgaatagcgg ttgttttggt gatttcatca atgcgtttcc aaactagtcg tacctcagaa 1980 gtggttacac gtcgaaaaaa ctaccgggac acaacatatc acctcatagc cgtgcatgtt 2040 gataaattca ccggctaatt ttcatgaatg acaaaatgat atatcaactt tagttacttg 2100 ttagtttaat ggtatatgaa tgaggtccat cgttgcatac agatacctaa gtcaccttgt 2160 aatagtccgc acgcttacaa ttattcgtgc ctcaacgtac tacaagcagt aagtatgata 2220 attaagattt gtgtggaagt gtacgagact tttgtatgac agtcttcatc tctccatttc 2280 ctggtttagt gacaccggtt agcgcgttca gtactttgat gtgtagcggt tattgaacaa 2340 tatatcaatc ttggcacagt ttgtgtcaaa caatagtgta atcctggact actgcagatt 2400 tcaagggcta ggaatatcta attttctcac actacgtaat tcatatgtat tctgaatcta 2460 acttcctaca agtgatttct tatattcttc atttacctgg cgtgtgtctg ttagggcaga 2520 tactcgcaac atatgattgc gtgaagtgac ccacttctta tctggcattc ctaacttatt 2580 tttctccaat cccacatttt ctttctgtaa tacatttttt atgtactgtg cttcacatag 2640 cgttgattct ctcgtgtgta atagtggtat ggagttcggg aagttggact gatgtatgtg 2700 cataccaaac aattccttga ttttgaccgt ctaccgtatt aggtggttaa tcccaagtat 2760 gatgcttaat gtctaatagt aagaaatttc atgagactgt tataattcta tcgataagta 2820 atgacatatg ttttaagatt tctgaccgaa cttttaattt tttgtaggat attgaaggag 2880 atatcatgga gcttttggag aagaagtgat caatggaact tatgagcttt gaacaaattc 2940 tcgctatatg acgatggcaa tctcaaatgt tcattggttg ccatttgatg aaatcagttt 3000 tgtgtgcacc tgattgcaga attttgttta ccttgctcat ttttttcatt gaaaccactt 3060 ctcagaataa atgtgttatc tataattgaa tgacttgtac ttcactggac ttgcttaaga 3120 gttgactgaa atgcttgtca tcgtaattac caaccaattt aatttcagaa gtgaacaata 3180 gtagttggac tattagaaaa gg 3202 // |
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