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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   L33462; SV 1; linear; genomic DNA; STD; PRO; 1580 BP.
XX
AC   L33462;
XX
DT   05-JUL-1995 (Rel. 44, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 3)
XX
DE   Helicobacter mustelae (clone pJVS100) urease (ureA) gene, 3' end; urease
DE   (ureB) gene, 5' end.
XX
KW   ureA gene; urease; ureB gene.
XX
OS   Helicobacter mustelae
OC   Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales;
OC   Helicobacteraceae; Helicobacter.
XX
RN   [1]
RP   1-1580
RX   PUBMED; 7642313.
RA   Solnick J.V., Josenhans C., Tompkins L.S., Labigne A.;
RT   "Construction and characterization of an isogenic urease-negative mutant of
RT   Helicobacter mustelae";
RL   Infect. Immun. 63(9):3718-3721(1995).
XX
CC   NCBI gi: 886250
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1580
FT                   /organism="Helicobacter mustelae"
FT                   /strain="NCTC 12032"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:217"
FT   CDS             <1..642
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="ureA"
FT                   /product="urease"
FT                   /note="NCBI gi: 886251"
FT                   /db_xref="GOA:P50044"
FT                   /db_xref="InterPro:IPR002019"
FT                   /db_xref="InterPro:IPR002026"
FT                   /db_xref="InterPro:IPR008223"
FT                   /db_xref="UniProtKB/Swiss-Prot:P50044"
FT                   /protein_id="AAC41483.1"
FT                   /translation="LHYAGELAKKRKERGVKLNYVEAVALISMEIMEHAREGKKTVADL
FT                   MSLGRQVLKAEDVMDGVAALVHEVQIEVCFPDGTLLVTVHNPIENNGKLHPGEFILKDE
FT                   DIVLNAGKEAIEVKVSNKGDRPIQVGSHFHFFETNKLLEFDREKRYGRRLDIASGTSVR
FT                   FEPGESKTVRLIQFGGNQRIFGFNDLNNGQVNEDNKRKALAAAKAKGFIK"
FT   RBS             640..647
FT   CDS             656..>1580
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="ureB"
FT                   /product="urease"
FT                   /note="NCBI gi: 886252"
FT                   /db_xref="GOA:P50045"
FT                   /db_xref="InterPro:IPR006680"
FT                   /db_xref="InterPro:IPR011059"
FT                   /db_xref="InterPro:IPR011612"
FT                   /db_xref="InterPro:IPR017950"
FT                   /db_xref="InterPro:IPR017951"
FT                   /db_xref="UniProtKB/Swiss-Prot:P50045"
FT                   /protein_id="AAC41484.1"
FT                   /translation="MIKISRKEYVSMYGPTTGDKVRLGDTELIAEIEKDYTVYGEEIKF
FT                   GGGKTIRDGMSQSVSPDVNELDAVITNAMIIDYTGIYKADIGIKDGKIAGIGKAGNRDT
FT                   QDGVGMDLVVGASTEAIAGEGLIVTAGGIDTHIHFISPTQIPTALYSGVTTMIGGGTGP
FT                   AAGTFATTISPGEWNIKQMIRAAEEYTMNLGFFGKGNTSNVKALEDQIKAGALGFKVHE
FT                   DCGSTPAVINHSLDIAEKYDVQVAIHTDTLNEGGAVEDTLAAIGGRTIHTFHTEGAGGG
FT                   HAPDIIKAAGEANILPASTNPTIPFTK"
XX
SQ   Sequence 1580 BP; 511 A; 274 C; 398 G; 397 T; 0 other;
     ttgcattatg ccggtgagtt ggcaaagaag cgtaaggaaa gaggcgtaaa gctaaattat        60
     gtagaagctg ttgctctcat tagtatggaa atcatggaac atgcaagaga gggcaaaaag       120
     actgtggctg atttgatgag cttgggtcga caggttctca aagcagagga tgtaatggat       180
     ggtgtagcag ctctggtgca tgaagtgcaa attgaagtat gcttccctga tggcactttg       240
     cttgtaactg tgcataaccc aattgagaat aatggcaagc tccatcctgg tgaattcatc       300
     ctaaaagacg aggacattgt gctcaatgca ggaaaagagg ctatagaggt taaggtaagc       360
     aacaaaggtg atagacctat tcaagtgggt tcacacttcc atttctttga gaccaataaa       420
     ctgcttgagt ttgatagaga aaaacgttat ggcagaagac ttgacattgc ttcaggaaca       480
     tctgtgagat ttgaaccagg tgagagcaaa actgtacgat tgattcagtt tggtggaaat       540
     caaagaatct ttggattcaa tgatcttaac aatgggcaag tcaatgagga caacaagaga       600
     aaggctctag ctgcggcaaa agctaagggt tttataaaat aagggagagt gaaaaatgat       660
     taagatttca agaaaagaat atgtttcaat gtatggacca accacaggag ataaagtaag       720
     acttggagac acagaactca tcgcagaaat cgaaaaagac tatacagttt atggagaaga       780
     gatcaagttt ggtggtggta agaccatccg cgatggtatg tcacaatctg tgagtcccga       840
     tgtaaatgaa ctcgatgcag tgatcacaaa tgcaatgatc attgactata caggaattta       900
     caaagcagac atcggcatca aagatggcaa gatcgcagga attggcaaag caggaaacag       960
     agatacgcaa gatggtgtgg gcatggattt ggtcgtaggt gctagcacag aagcaatcgc      1020
     gggtgaaggt ttgattgtca cagctggtgg aattgacact catattcact ttatttctcc      1080
     tacacaaatt cccacagcac tttatagtgg tgtcactaca atgattggtg gtggtacagg      1140
     tcctgcggca ggtacttttg caactacgat ttctcctggt gagtggaata tcaaacaaat      1200
     gattcgcgct gctgaggaat acaccatgaa tcttggattt tttggtaagg gcaatacatc      1260
     taatgtaaaa gcgcttgagg atcaaatcaa agcaggtgcg ctaggattta aggtacatga      1320
     ggactgtggc tccactcctg ctgtaatcaa tcattctctc gatattgcag agaaatatga      1380
     tgtacaagtt gccatccaca cagatacgct caatgaggga ggtgctgtgg aagatacgtt      1440
     agcagcaatc ggtggtagaa ctatccacac tttccataca gaaggcgcag gcggtggaca      1500
     tgctccagat attattaagg cagcaggaga ggcgaatatt ttgccagctt ctaccaatcc      1560
     tacaattcct ttcacaaaga                                                  1580
//
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