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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   L32171; SV 1; linear; genomic DNA; STD; PRO; 1518 BP.
XX
AC   L32171;
XX
DT   02-MAY-1994 (Rel. 39, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 5)
XX
DE   Erwinia carotovora pectate lyase (pel-1) gene, complete cds.
XX
KW   pectate lyase; pel-1 gene; structural protein.
XX
OS   Pectobacterium carotovorum
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
OC   Enterobacteriaceae; Pectobacterium.
XX
RN   [1]
RP   1-1518
RX   PUBMED; 7772808.
RA   Chatterjee A., Liu Y., Chatterjee A.K.;
RT   "Nucleotide sequence of a pectate lyase structural gene, pel1 of Erwinia
RT   carotovora subsp. carotovora strain 71 and structural relationship of pel1
RT   with other pel genes of Erwinia species";
RL   Mol. Plant Microbe Interact. 8(1):92-95(1995).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1518
FT                   /organism="Pectobacterium carotovorum"
FT                   /sub_species="carotovora"
FT                   /strain="71"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:554"
FT   -35_signal      145..150
FT   -10_signal      168..173
FT   RBS             277..280
FT   CDS             291..1415
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="pel-1"
FT                   /product="pectate lyase"
FT                   /db_xref="GOA:Q47467"
FT                   /db_xref="HSSP:1AIR"
FT                   /db_xref="InterPro:IPR012334"
FT                   /db_xref="UniProtKB/TrEMBL:Q47467"
FT                   /protein_id="AAA73933.1"
FT                   /translation="MKYLLPTAAAGLLLLAAQPAMAANTGGYATTDGGEVSGAVKKTAR
FT                   SMKEIVDILKPRKWIQKARKSKAVPYPLIITYSGNEDSLIKAAEKNICGQWSKDARGVQ
FT                   IKEFTKGITIQGTNGSSANFGVWIVNSSNVVVRNMRFGYMPGGAQDGDAIRIDNSPNVW
FT                   IDHNEIFAKNFECKGTPDNDTTFESAVDIKKGSTNVTVSYNYIHGIKKVGLSGATNTDT
FT                   GRNLTYHHNIYSDVNSRLPLQRGGLVHAYNNLYDGITGSGFNVRQKGIALIESNWFENA
FT                   LNPVTARNDSSNFGTWELRNNNITKPADFSKYKITWGKPSSPHINADDWKSTGKFPAVS
FT                   YKYTPVSAQCVKDKLANYAGVGKNLAVLTAANCK"
XX
SQ   Sequence 1518 BP; 453 A; 373 C; 332 G; 360 T; 0 other;
     ctcgagtgca tttattatct actaaaaaag taaccttatg atttaccgtt actttaaagg        60
     aaaattattt tctataaaaa ataaaaccat ccaatcatca gtattacaaa atgtttcatc       120
     cgcaatacat ttaacatttc acccttgaac tgatcttatt ttttgaccac actccccttg       180
     gtttttcacc aaaattgaaa ttcatttttg ttgaaaaatt tacacttgtt acatcgggca       240
     tagggatcga taaatgccca tgaaaattct attccaagga gacagtgata atgaaatacc       300
     tattgcctac ggcagccgct ggattgctat tactcgcggc tcaacccgca atggccgcaa       360
     atacgggcgg ctatgccact acggatggtg gagaagtgtc cggtgccgtg aaaaaaacgg       420
     cacgttccat gaaagaaatt gtggatatat tgaagccgcg caagtggatt caaaaggcaa       480
     gaaagtcaaa ggcggtgcct tacccgctca tcatcaccta tagcggtaat gaagactcat       540
     taatcaaagc ggctgaaaag aatatctgcg gccagtggag taaagacgca cgcggcgtac       600
     aaatcaaaga gttcaccaaa ggcattacta tccagggcac caatggctca tccgccaact       660
     tcggtgtctg gattgtgaac tcttctaatg tcgtggtacg taacatgcgc tttggctata       720
     tgccgggcgg cgcgcaagac ggcgatgcca ttcgtatcga taactccccg aacgtctgga       780
     tcgaccacaa cgaaatcttt gccaagaact ttgagtgtaa gggcacgcca gacaatgaca       840
     ccacctttga atcggctgtc gatatcaaaa aagggtcaac taacgtcacg gtatcctaca       900
     attatattca tggtatcaag aaagtcggcc tgagcggcgc aacgaatacg gatacgggcc       960
     gtaacctgac ttaccatcac aatatttata gcgatgttaa ctcacgcctg ccgctgcaac      1020
     gtggtggtct ggttcacgcg tacaacaacc tgtatgacgg catcaccggt tcaggcttta      1080
     acgtgcgtca gaaagggatc gcactgattg aaagcaactg gttcgagaat gcgctcaacc      1140
     cagtgacagc acgtaacgac agctcaaact ttggtacctg ggagctgcgt aacaacaaca      1200
     tcacgaaacc ggcagacttc tccaaataca aaatcacctg gggcaagcct tcctctcctc      1260
     acatcaatgc ggatgactgg aagagcaccg gtaagttccc tgccgtctcc tataagtaca      1320
     ctccagtttc tgcacagtgc gtgaaggata aactggcaaa ctatgctggc gtcggtaaaa      1380
     acctggcagt actgacagca gctaactgca aataaacgcg gtcaggcttt ctccgtcgtc      1440
     gcaagacagg aagcaataag tctgaatatc ccgcgccgtg actcttcata cagaagcatg      1500
     gttctaccaa gcgagctc                                                    1518
//
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