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EBI DbfetchID L27669; SV 1; linear; genomic DNA; STD; PLN; 3390 BP. XX AC L27669; XX DT 06-MAY-1994 (Rel. 39, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 11) XX DE Chlamydomonas reinhardtii glyceraldehyde-3-phosphate dehydrogenase (gapC) DE gene exons 1-7, complete cds. XX KW glyceraldehyde-3-phosphate dehydrogenase. XX OS Chlamydomonas reinhardtii OC Eukaryota; Viridiplantae; Chlorophyta; Chlorophyceae; Chlamydomonadales; OC Chlamydomonadaceae; Chlamydomonas. XX RN [1] RP 1-3390 RX DOI; 10.1038/367387a0 RX PUBMED; 8114942. RA Kersanach R., Brinkmann H., Liaud M.F., Zhang D.X., Martin W., Cerff R.; RT "Five identical intron positions in ancient duplicated genes of eubacterial RT origin"; RL Nature 367(6461):387-389(1994). XX CC NCBI gi: 454123 XX FH Key Location/Qualifiers FH FT source 1..3390 FT /organism="Chlamydomonas reinhardtii" FT /isolate="1132" FT /mol_type="genomic DNA" FT /db_xref="taxon:3055" FT exon <1..124 FT /gene="gapC" FT /number=1 FT CDS join(120..124,372..397,538..748,1136..1217,1422..1589, FT 1831..2001,2304..2666) FT /codon_start=1 FT /gene="gapC" FT /product="glyceraldehyde-3-phosphate dehydrogenase" FT /EC_number="1.2.1.12" FT /note="putative; NCBI gi: 454124" FT /db_xref="GOA:P49644" FT /db_xref="InterPro:IPR000173" FT /db_xref="InterPro:IPR006424" FT /db_xref="InterPro:IPR016040" FT /db_xref="InterPro:IPR020828" FT /db_xref="InterPro:IPR020829" FT /db_xref="InterPro:IPR020830" FT /db_xref="InterPro:IPR020831" FT /db_xref="InterPro:IPR020832" FT /db_xref="UniProtKB/Swiss-Prot:P49644" FT /protein_id="AAA86856.1" FT /translation="MSGKIKIGINGFGRIGRLVMRATMLRPDIEVVAINDPFIDAEYMA FT YMFKYDSVHKTWPGHVNGSKDGFLVEGRKIHTFTESDPSKINWGAAGADIVIESTGVFT FT DIAKATAHLTGGAKKVIITAPSNDAPMYVMGVNHEKYNPATDHIISNASCTTNCLAPLA FT KVVNSKFGIKEGLMTTVHATTATQKTVDGPSKKDWRGGRAVNGNIIPSSTGAAKAVGKV FT LPELKGKLTGMAFRVPTNDVSVVDLTVTLEKATTYEDIMKALKEASEGEMKGVLAYTDE FT DVVSSDFVTDPASCTVDAKAGIMLSPTFVKLVAWYDNEWGYSNRVVDLALHVAKKAAVK FT V" FT intron 125..371 FT /gene="gapC" FT /number=1 FT exon 372..397 FT /gene="gapC" FT /number=2 FT intron 398..537 FT /gene="gapC" FT /number=2 FT exon 538..748 FT /gene="gapC" FT /number=3 FT intron 749..1135 FT /gene="gapC" FT /number=3 FT /note="does not fit consensus" FT exon 1136..1217 FT /gene="gapC" FT /number=4 FT intron 1218..1421 FT /gene="gapC" FT /number=4 FT exon 1422..1589 FT /gene="gapC" FT /number=5 FT intron 1590..1830 FT /gene="gapC" FT /number=5 FT exon 1831..2001 FT /gene="gapC" FT /number=6 FT intron 2002..2303 FT /gene="gapC" FT /number=6 FT exon 2304..>3390 FT /gene="gapC" FT /number=7 FT polyA_signal 3364..3368 FT /gene="gapC" FT /note="putative" XX SQ Sequence 3390 BP; 622 A; 1065 C; 1025 G; 678 T; 0 other; gtcgacagct tttgcacact tggaagctag gagtatgtcc tttagtgcat ttagggcatt 60 tccctcgatg acgagtctgg gtcggtgggt gtcttccata aacggcaggt tccgccggaa 120 tgaggtcatc ccggaatcga agcttggcca gccgagcatt taatccaagt ccattgcctc 180 agccagtatt actatcaaca ataggattac tcaaccgact gcatttagcc ggccaaacta 240 ctcctgtgtc ctgcagctgt tcctccaaca gtcacgatgg ccctcctcgc ccagccctct 300 gtgaacgcct ccgcgcgtgc tggccgcccc aaccgctcgc gtgtggtggt gccatgcatc 360 cgtgctgaga gtggcaagat taagatcggc atcaacggtg agcgtgggga agggcgtgaa 420 caatcagggc atgcgcggtt ccgtaacagc ccttccggag ccggaattca gaagcatcgc 480 gctcaccgtc gaccagctct gtgcgttggc aggcgataac ttggtccaat gctgcaggct 540 tcggccgcat tggccgcctg gttatgcgcg ccacgatgct gcgccccgac atcgaggtcg 600 tggcgatcaa cgacccattc attgatgccg aatacatggc ctacatgttc aagtatgact 660 cggtccacaa gacctggccc ggccacgtca atggcagcaa ggacggcttc ctggtggagg 720 gccgcaagat tcacaccttt actgagaggc aagccgtgcg ttgtggggcg caatttcatc 780 tagaaccata attcaggctg cagcggtcaa cctggcatca gttcaagtac ttggcactgc 840 gcggtcccgc cccgcatgcg ctttcggcga gcaacagtct tcggaccttt tccccgcacc 900 ttgcccagaa gcatacaatg ctcgacctgt taacaaaggc gtgcatgctg catttgttgc 960 caccgccaat ccccgattgg ggtttcggaa ttaagtggag ggcgcggcac gacgtgttaa 1020 gcccgcaggc cagggtcgac cacttgcgcc tgctcgactc ccccccccct caaacttgcc 1080 tctcactggc ttgttgactc ttctgccgcc gcacccactc cttccttgtg tgcagcgacc 1140 cgagcaagat caactggggc gctgccggcg ctgacatcgt gattgagagc actggcgtgt 1200 tcactgacat cgccaaggtg agcacagctc tcctctccac acaggccccg ggtgcatgtg 1260 tgcccgcgtc accccgtgcg cagcccaccg tccaccaacg ctacccactg atgcactgct 1320 atgcacgacg acgctactcc cgatggccaa ccattcaccc acagcctcgc caaccgcacc 1380 tgccgctctc accttccctt ccctctcgcc ctccgcgcca ggccaccgcc cacctgaccg 1440 gcggcgccaa gaaggtgatc atcaccgcgc cctccaatga cgcgcccatg tatgtgatgg 1500 gcgtcaacca cgagaagtac aaccccgcca cggaccacat catctccaac gcctcctgca 1560 ccaccaactg cctggcgccc ctggccaagg tgaggcggct gaggggcagc agcgggtcga 1620 ggatggctgt gcatgcaggg gttggctgcg gtgtgcgtgg tatgcctccg aatactacta 1680 gatggtagtt cgagcaggat cagcgtgaag gcggtaggaa ctttcattcc gggcatcacc 1740 ttcagccctg cttgcattgt ccgatgccat atcgtgagtc actgctccct gcgcatgacc 1800 gctcttgcct ctcatcccct aaccacccag gttgtgaaca gcaagttcgg catcaaggag 1860 ggcctgatga ccaccgtgca cgccaccacc gccacccaga agaccgtgga cggccccagc 1920 aagaaggact ggcgcggcgg ccgcgccgtc aacggcaaca tcatcccctc ctccaccggc 1980 gccgccaagg ccgtgggcaa ggtgcgcgct cggatgcggg cattggttgg gggtgcaggt 2040 ggtggcgttg caggccggaa gtgcgtcggt ttgctgtgtg gcgagggcgg caccaccatt 2100 ggattggcgg gacccgtgtc acattgaagt gtaaccgaga gacggcattt ttggagatgg 2160 cgggtacgtc caggctctag agagctccac cggcgggccc gcttgagcgc tgtgccgcgt 2220 caacgcccac ccccgcttcc actgcccgac gccgcctccc tcccacctct ccctgcctca 2280 cgccctgtac cccccctccc caggtgctgc ctgagctcaa gggcaagctg actggcatgg 2340 ccttccgcgt gcccaccaac gacgtgtcgg tggtggacct gaccgtgacg ctggagaagg 2400 cgaccacgta cgaggacatc atgaaggcgc tcaaggaggc gtcggagggc gagatgaagg 2460 gcgtgctggc ctacacggac gaggacgtgg tgtcctccga ctttgtgacc gaccccgcct 2520 cctgcaccgt ggacgccaag gccggcatca tgctgagccc caccttcgtc aagctggtgg 2580 cctggtacga caacgagtgg ggctacagca accgcgtggt ggacctggcc ctgcacgtcg 2640 ccaagaaggc cgccgtcaag gtgtaaagca gccggccgga aaggcgtggc gggcgggcag 2700 cttgctgatg gcgttaggag gacacaggct tggacgggcg cgagttggag cagattgctt 2760 cagggcttcg gcgtgcgagt ggttgcgcgc gccggcctct ttggtgtgtt gcgttgtagt 2820 gcttctttgc gtgtgagagg gatgttgtcg gttggcgtgt gtgcggacaa gggtcgtggg 2880 cacgttgccg cgtcccttgg ggcctctacc ctggaatccg tgtgcggaca tggggcacag 2940 ggggtggctg ttgatcccgg ccctcagcct tgggtccctg tgccggcgaa agacggcgct 3000 cgttcttcat tggagtgtgg agctgtattg gcgcagtggt taaagaagta ctgcgggccg 3060 ccatgaatgc tgctcagctt gcattcactg tatgggggca ctgccgcgtt gcgcgcgcaa 3120 cacgtcacat ccgtttgagt ggggaagagt actgtgcatg gctgatcacg tggggccgac 3180 acgtgtgcgt gtgcagtggc gtgcattggt gttgccacat gcaggctact gcacctgggc 3240 catgcggcga ccttcggcca tgcattcttt cataaaagga tttaggcgtt cttgcattaa 3300 ggactgccac acggtgcgtg aacggctgac aggagatctt gagtgcatgt gcactgcaac 3360 aaatgtaagc ccaccgcatt cgccctgcag 3390 // |
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