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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   L26924; SV 1; linear; mRNA; STD; PLN; 1192 BP.
XX
AC   L26924;
XX
DT   16-DEC-1993 (Rel. 38, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 5)
XX
DE   Ginkgo biloba glyceraldehyde-phosphate dehydrogenase mRNA, complete cds.
XX
KW   glyceraldehyde-phosphate dehydrogenase.
XX
OS   Ginkgo biloba (maidenhair tree)
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Ginkgophyta; Ginkgoales; Ginkgoaceae; Ginkgo.
XX
RN   [1]
RP   1-1192
RX   DOI; 10.1007/BF00178247
RX   PUBMED; 8064871.
RA   Jansson S., Meyer-Gauen G., Cerff R., Martin W.;
RT   "Nucleotide distribution in gymnosperm nuclear sequences suggests a model
RT   for GC-content change in land-plant nuclear genomes";
RL   J. Mol. Evol. 39(1):34-46(1994).
XX
CC   Original source text: Ginkgo biloba immature seed cDNA to mRNA.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1192
FT                   /organism="Ginkgo biloba"
FT                   /mol_type="mRNA"
FT                   /dev_stage="immature"
FT                   /tissue_type="seed"
FT                   /db_xref="taxon:3311"
FT   5'UTR           1..23
FT   CDS             24..1046
FT                   /codon_start=1
FT                   /product="glyceraldehyde-phosphate dehydrogenase"
FT                   /db_xref="GOA:Q39769"
FT                   /db_xref="InterPro:IPR000173"
FT                   /db_xref="InterPro:IPR006424"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="InterPro:IPR020828"
FT                   /db_xref="InterPro:IPR020829"
FT                   /db_xref="InterPro:IPR020830"
FT                   /db_xref="InterPro:IPR020831"
FT                   /db_xref="InterPro:IPR020832"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q39769"
FT                   /protein_id="AAA33352.1"
FT                   /translation="MSSTGKIKIGINGFGRIGRLVARVALLRDDIELVAVNDPFISTDY
FT                   MTYMFKYDSVHGQWKKHEVKVKDSNTLLFGEKAVTVFGCRNPEEIPWGETGVEYVVEST
FT                   GVFTDKEKAAAHIKGGAKKVVITAPSKDAPMFVVGVNEHEYKPDLAIVSNASCTTNCLA
FT                   PLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSNKDWRGGRGAGFNIIPSSTGAAKAV
FT                   GKVLPALNGKLTGMAFRVPTPDVSVVDLTVRLEKPASYDEIKAAIKEESEGKLKGILGY
FT                   TEDDVVSTDFIGDNRSSIFDAKAGIALSDNFVKLVSWYDNEWGYSSRVIDLIVHMASTV
FT                   "
FT   3'UTR           1047..1192
FT   polyA_site      1192
XX
SQ   Sequence 1192 BP; 323 A; 228 C; 308 G; 333 T; 0 other;
     cataatttca gtgtctgcct gccatgagtt ccaccggaaa gattaagatc ggcatcaatg        60
     gttttggccg aatcggaagg ctggttgccc gtgtggcgtt gctgcgcgat gatattgagc       120
     tcgttgccgt taacgatccc ttcatctcta cggattacat gacctatatg ttcaagtatg       180
     acagtgtcca tggccaatgg aagaaacacg aagtcaaagt caaggactcc aacaccttac       240
     tctttgggga gaaagctgtc acggttttcg gttgtaggaa tcccgaggaa ataccctggg       300
     gtgagactgg cgtagagtat gtggttgaat ccacgggagt cttcactgac aaagagaaag       360
     cagctgcaca cattaaggga ggtgccaaaa aggtggtcat cacagctcca agcaaggatg       420
     ctcccatgtt cgttgttggc gtgaatgagc atgaatacaa gcccgattta gcaattgttt       480
     ctaatgcaag ctgtaccacc aactgcttgg ctcctttggc aaaggtgatc aatgataggt       540
     ttggcattgt tgaaggtctc atgaccactg tccattccat cacagcaact cagaagacag       600
     ttgatggacc atctaacaag gactggagag ggggcagagg tgctggattt aacattattc       660
     ctagcagtac tggagctgcc aaggctgtag gtaaggtttt accagctctc aatggaaagt       720
     tgactggaat ggccttccga gtaccaacac cagatgtttc agttgtggat ttgactgtta       780
     gactcgagaa gcctgcatct tatgatgaaa tcaaggccgc catcaaggag gaatctgagg       840
     ggaaattgaa aggaattctt ggttacacag aggatgatgt tgtatcaaca gatttcatag       900
     gagataaccg atcaagcatt tttgatgcaa aggctggaat agctttgagt gacaattttg       960
     tgaaattagt atcgtggtat gacaatgaat ggggttacag ttctcgggtg atagatctga      1020
     tcgtccatat ggcctccact gtctaactag aatcatgact acggtttgtc ttcatatttt      1080
     cttttgtgag aagatttgga aggttttgac ggttgctgga acattgtttt ttgtcgtcag      1140
     tatcacctct gattagcagg ttgtgtagat aaggatctac aacattttga at              1192
//
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