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EBI DbfetchID L23502; SV 1; linear; genomic DNA; STD; FUN; 4122 BP. XX AC L23502; X74777; XX DT 14-DEC-1993 (Rel. 38, Created) DT 10-JUL-2003 (Rel. 76, Last updated, Version 9) XX DE Aspergillus niger alpha-L-arabinofuranosidase precursor (abfB) gene, DE complete cds. XX KW . XX OS Aspergillus niger OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; OC Eurotiomycetidae; Eurotiales; Trichocomaceae; mitosporic Trichocomaceae; OC Aspergillus. XX RN [1] RP 1-4122 RX DOI; 10.1007/BF00351717 RX PUBMED; 8299175. RA Flipphi M.J., van Heuvel M., van der Veen P., Visser J., de Graaff L.H.; RT "Cloning and characterization of the abfB gene coding for the major RT alpha-L-arabinofuranosidase (ABF B) of Aspergillus niger"; RL Curr. Genet. 24(6):525-532(1993). XX RN [2] RP 1-4122 RA Flipphi Ja M.; RT ; RL Submitted (24-AUG-1993) to the EMBL/GenBank/DDBJ databases. RL LUW Section Molecular Genetics of Industrial Microorganisms, Wageningen RL Agricultural University, Dreijenlaan 2, Wageningen 6703 HA, Netherlands XX RN [3] RP 1-4122 RA Flipphi Ja M.; RT ; RL Submitted (29-NOV-1993) to the EMBL/GenBank/DDBJ databases. RL LUW Section Molecular Genetics of Industrial Microorganisms, Wageningen RL Agricultural University, Dreijenlaan 2, Wageningen 6703 HA, Netherlands XX CC On Jul 9, 2003 this sequence version replaced gi:452306. XX FH Key Location/Qualifiers FH FT source 1..4122 FT /organism="Aspergillus niger" FT /mol_type="genomic DNA" FT /tissue_lib="CBS 120.49" FT /db_xref="taxon:5061" FT gene 1462..3161 FT /gene="abfB" FT mRNA 1462..3161 FT /gene="abfB" FT /product="alpha-L-arabinofuranosidase precursor" FT /note="major transcription initiation site" FT 5'UTR 1462..1529 FT /gene="abfB" FT CDS 1530..3029 FT /codon_start=1 FT /gene="abfB" FT /product="alpha-L-arabinofuranosidase precursor" FT /EC_number="3.2.1.55" FT /db_xref="GOA:P42255" FT /db_xref="InterPro:IPR007934" FT /db_xref="UniProtKB/Swiss-Prot:P42255" FT /protein_id="AAB53944.1" FT /translation="MFSRRNLVALGLAATVSAGPCDIYEAGDTPCVAAHSTTRALYSSF FT SGALYQLQRGSDDTTTTISPLTAGGVADASAQDTFCANTTCLITIIYDQSGNGNHLTQA FT PPGGFDGPDVDGYDNLASAIGAPVTLNGQKAYGVFMSPGTGYRNNEATGTATGDEPEGM FT YAVLDGTHYNDACCFDYGNAETSSTDTGAGHMEAIYLGNSTTWGYGAGDGPWIMVDMEN FT NLFSGADEGYNSGDPSISYSFVTAAVKGGADKWAIRGGNAASGSLSTYYSGARPDYSGY FT NPMSKEGAIILGIGGDNSNGAQGTFYEGVMTSGYPSDDVENSVQENIVAAKYVSGSLVS FT GPSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWTVVTGLANS FT QCFSFESVDTPGSYIRHYNFELLLNANDGTKQFHEDATFCPQAPLNGEGTSLRSWSYPT FT RYFRHYENVLYAASNGGVQTFDSKTSFNNDVSFEIETAFAS" FT sig_peptide 1530..1583 FT /gene="abfB" FT mat_peptide 1584..3026 FT /gene="abfB" FT /product="alpha-L-arabinofuranosidase" FT 3'UTR 3030..3161 FT /gene="abfB" FT polyA_site 3161 FT /gene="abfB" FT /note="3161 is the most 3' base found in the cDNA clones.; FT putative" XX SQ Sequence 4122 BP; 991 A; 1127 C; 1024 G; 980 T; 0 other; ggatcccttc cagaaagata agtgggagaa gtaccgccgc gagattttac aaaatggtgg 60 cagccagcaa gacctgttcc agatgctgga gagatttttg ggtcgtccgc caaatatgaa 120 tgctcttgtg gaaggtctga agcgggcaga cagtcaacac gaatgttaga agaggcggca 180 tattacacca tgggcttttc agacagaatt actgcagaag tcagagccac gcaatgttac 240 catgccacgc caatcaggtc agctgcttga attgggttca aaatccccag gaacccgagc 300 ggcccgagcc tgccgagggt cacagacgat gcggagggcc gcttggcatc caatgtctcc 360 ctctttataa ctcccatatc atgtctgcct tggccatata agccattcca tagtgcaatg 420 ccatagactg tctatcggaa ggtgtccggt aattctccgt gtttcttaca gatgctcggg 480 aagtcaatag actgcagggc tcttcatgcg tcatgatata accgacggca cctcctttgg 540 gctgtgctta gtgggtccgg taggctagac attcaagcgc agccattcac agcttcagtc 600 caaagacatg accgaatagt agtatcctaa tagagttcga gtaccatgac cacatggtgt 660 gaagaacatg ggttcccctc acggcgccgg ttaaaggcca tcccctcctc aaagaataaa 720 catcgtacga cgtacacggg tcggttgttt caactattat atttcattcc aactatactt 780 attgcaaagc ggaattggct ccggtcatca tacagccttt caggggtaat catattgctc 840 gatatccggg gtaatgacat ccaagttgta cctactaaaa cttacccatt actcgaaagt 900 agacactgcc tccggaaaag cattcaacaa ccctcaacaa aactaacttc cgcaggaatg 960 cggcacctcc attccctcca caattaccga ggcttatccc aggaggaaca gatccctgaa 1020 gaaacgtgac gaaccgtgat gagcgggcaa tcacagatta gtctcttccc ccgcatcccc 1080 gacgggcaaa accccggtgg cactggcatt agccctaggc acggacaaag ccattgtcaa 1140 gccttcagga actaaatcaa ctaattctcc ccatccctgc ggggtacata ctccacgacg 1200 ccctgcacgc ccaccggaat gccgtcgtcg cttgacatca tgtggaacaa cacattcctt 1260 ctgcctcaaa actgagcctt ttaaccgacc ggttacttaa caatgtatac aggaggtctc 1320 aatattggag gaaaatccct gacccctgaa gccacacatg taactagact tttgggatct 1380 tgcatttcat gcataggcac tgactgcagt aaagaatata aataagcctc ccttcgcacc 1440 ctagtagcat gatttctttc tccaagcggc ctatctcact gtctcctctc ctagcccaga 1500 acttactgag caggcagtaa tcctccacca tgttctcccg ccgaaacctc gtcgccctag 1560 ggctggcagc caccgtcagc gccggcccct gtgacatcta cgaagccggc gacacgccct 1620 gcgtagccgc gcacagcacc acccgcgccc tatacagctc cttcagcggc gccctctacc 1680 agctccaacg tggctccgac gacaccacca ccaccatctc cccgctcaca gccggcggcg 1740 tcgccgacgc ctccgcccaa gacaccttct gtgccaacac cacctgcttg atcaccatca 1800 tctacgacca atccggcaac ggcaaccacc tgacccaagc acccccggga ggcttcgacg 1860 gccccgacgt cgacggctac gacaacctcg ccagcgccat cggcgccccc gtcaccctca 1920 atggccaaaa ggcctacggc gtgttcatgt cccccggcac gggctaccgt aacaacgaag 1980 ccaccggcac cgccaccggc gacgaacccg aaggcatgta cgccgtcctg gacggcacgc 2040 actacaacga cgcctgctgc ttcgactacg gcaacgccga gaccagcagc accgacactg 2100 gcgccggcca catggaggcc atctacctcg ggaacagcac cacctggggc tacggcgccg 2160 gtgacgggcc ctggatcatg gtcgatatgg agaacaacct cttctccggt gctgatgagg 2220 gatataactc cggagatccc tcgatcagct acagctttgt cactgccgcg gtcaagggcg 2280 gggctgataa gtgggctatt cgcggtggta atgctgcctc tgggtccctc tctacttact 2340 acagcggcgc tcgcccggat tactccggct ataaccccat gagcaaggag ggcgctatca 2400 tcctgggtat cggcggtgac aacagcaacg gcgcccaggg taccttctac gagggtgtca 2460 tgacctccgg ctacccgtcg gacgatgtcg agaactccgt ccaggagaac atcgtggctg 2520 cgaaatacgt ctccggctcg ctggtcagcg gcccgtcgtt cacctccgga gaggtggtct 2580 cgctgcgtgt cactaccccc ggttacacga cgcggtatat tgcgcacact gacaccactg 2640 tgaacacgca ggtcgtggac gacgatagtt ccaccacgct gaaggaggag gctagctgga 2700 ccgtggtgac aggtctggct aatagtcagt gcttctcgtt cgagtcggtt gatacccctg 2760 gtagctatat ccggcattac aactttgagt tgctgcttaa tgccaacgat ggcacgaagc 2820 agttccatga ggatgctact ttctgtcctc aggcgccgtt gaatggagaa ggtacttcgt 2880 tgagatcgtg gagttatccg acgaggtatt tcaggcatta tgagaatgtc ctgtatgctg 2940 ctagtaatgg tggtgtgcag acgtttgatt ccaagacgtc gtttaataat gatgttagct 3000 ttgagattga gacggcgttt gcttcgtaag gggggaattg ggggttgttt ggtggtttgg 3060 gtgtggggtt gtatctgcct gtgttggcgg ggagagtggt ttgtaaatag gtcatttttg 3120 gtatatagca tacgaatact atacgatagt atacatgata gtggttgttt catgtaatcg 3180 agaaattatt caaggcttgc aatacaatat cttattactg tatctcgtgg agcattcaca 3240 gactgaacgg ctgcacaatg attcttatgc ggtgatattg actgtgatta gatgatatat 3300 tcaggtgtgc tatttttctt gtatttatgc ttcatgcgaa tatatgtatt tcacgacaga 3360 cagagaggtt aaacaaagca tactaacgag cgattcagat atggcatgta tgaataagac 3420 aaaagtactg cgacactcaa gaccaacaca aaccagtata cttcataaca atatatgcta 3480 ggcagtacct ccgattctac gatgagcttt accagaaaat ggatttcttt gtccctcgtc 3540 attctcaatt tttgggcctt ccacggctgc ggcaacctgt tgagcaagac gtgttctctc 3600 gtacggatgg acgttgatct tcttctcgag caggtccaat tgctctttct ccaaatggcg 3660 gactctgacc tcaccggagg aatcactcgg caagcatatc tggtaagtcg ctgaaaattt 3720 cttctcgaaa ctggcgtagc ttggtggcca ctgcgggaag cgtcggaagt atttgcctgt 3780 ccagacggtc aatatgaatg agtcggatac ttcaatgccc gcctgccttc tacggtcgaa 3840 gaaatgctgg ccgatgcttc tcacggaggc atagtttata acaggcttga tggggttttg 3900 tatgtcgagg agacctaatt caaagtgcat agataggctc ctgagattgt gaaaaccggt 3960 tgctagtttg tcgaagacgt cgttgggctg ttgtgtggtt atagttcagt tcatgggatg 4020 tactaagagg attctttggc ttacccattg atcgttctct ctcttgactc ccacctgcag 4080 tgacttcagt ttgggacagc taacatcgag gtggctgagc tc 4122 // |
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