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EBI DbfetchID L22857; SV 1; linear; genomic DNA; STD; FUN; 2603 BP. XX AC L22857; XX DT 06-AUG-1993 (Rel. 36, Created) DT 03-OCT-2007 (Rel. 93, Last updated, Version 11) XX DE Colletotrichum gloeosporioides pectin lyase (pnlA) gene, complete cds. XX KW pectin lyase; pnlA gene. XX OS Colletotrichum gloeosporioides OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; OC Sordariomycetes incertae sedis; Phyllachorales; Phyllachoraceae; OC Glomerella. XX RN [1] RP 1-2603 RX DOI; 10.1016/0378-1119(94)90369-7 RX PUBMED; 8181749. RA Templeton M.D., Sharrock K.R., Bowen J.K., Crowhurst R.N., Rikkerink E.H.; RT "The pectin lyase-encoding gene (pnl) family from Glomerella cingulata: RT characterization of pnlA and its expression in yeast"; RL Gene 142(1):141-146(1994). XX RN [2] RP 1-2603 RA Templeton M.D., Sharrock K.R., Bowen J.K., Crowhurst R.N., Rikkerink E.H.; RT ; RL Submitted (11-AUG-1993) to the EMBL/GenBank/DDBJ databases. RL Horticulture and Food Research Institute of New Zealand Ltd., Molecular RL Genetics Group, Mt Albert, Auckland, New Zealand XX FH Key Location/Qualifiers FH FT source 1..2603 FT /organism="Colletotrichum gloeosporioides" FT /mol_type="genomic DNA" FT /note="teleomorph: Glomerella cingulata" FT /db_xref="taxon:474922" FT gene <379..2603 FT /gene="pnlA" FT CDS join(379..683,742..793,842..964,1022..1283,1351..1402, FT 1489..1529,1775..2082) FT /codon_start=1 FT /gene="pnlA" FT /product="pectin lyase" FT /db_xref="GOA:Q00374" FT /db_xref="HSSP:1QCX" FT /db_xref="InterPro:IPR012334" FT /db_xref="UniProtKB/Swiss-Prot:Q00374" FT /protein_id="AAA21817.1" FT /translation="MRSASILSAALAAFAPLASAADAVSGAAEGFAKGVTGGGSATPVY FT PSTTAELASYLKDSSARVIVLTKTFDFTGTEGTTTETGCAPYGTAAACQVAINKDNWCT FT NYQPNAPKVSVSYDKAPFNPLIVGSNKSLIGQGSKGVIKGKGLRITNSAKNVIIQNIHI FT TNLNPKYVWGGDAISLDGTDLVWFDHVKTSLIGRQHIVLGNGASNRVTISNNEIDGSTS FT WSATCDNHHYWGVYLTGSNDMVTFSKNYIHHTSGRSPKIAGNSLVHISGNYFYANSGHA FT MEADAGAKVVLEGNVFQNVVAAMQSGLAGKVFSSPDANTNAQCSSYLGHTCQLNAYGSS FT GSLSGSDTSILSSFSGKNVAATVTANDAKNVPNTAGFGKI" FT exon <379..683 FT /gene="pnlA" FT /number=1 FT intron 684..741 FT /gene="pnlA" FT /number=1 FT exon 742..793 FT /gene="pnlA" FT /number=2 FT intron 794..841 FT /gene="pnlA" FT /number=2 FT exon 842..964 FT /gene="pnlA" FT /number=3 FT intron 965..1021 FT /gene="pnlA" FT /number=3 FT exon 1022..1283 FT /gene="pnlA" FT /number=4 FT intron 1284..1350 FT /gene="pnlA" FT /number=4 FT exon 1351..1402 FT /gene="pnlA" FT /number=5 FT intron 1403..1488 FT /gene="pnlA" FT /number=5 FT exon 1489..1529 FT /gene="pnlA" FT /number=6 FT intron 1530..1774 FT /gene="pnlA" FT /number=6 FT exon 1775..2603 FT /gene="pnlA" FT /number=7 XX SQ Sequence 2603 BP; 608 A; 743 C; 612 G; 640 T; 0 other; tggtttttgc tttgcgccct cggccgatta cagattttga ggcctcgaag ggtagcgcct 60 agacagcttg tcagtaagat gaggttgtct gtcgtctcgt ccctgttggt gggggttgtg 120 cagggcagct cagggggcgg agaggaacgg cggaaggaaa gacgagacga gactaagatg 180 gagcagagaa acagacggag ggacgatgaa ccaacagaat gtatatatcg tcgacatcag 240 ccggctgttc ttgacttggg aagatccttt cttcagcagc tttcgctctt caacattctc 300 tctttattcg actaccgact ccacattcat tcattctttt gtacctacta cttctgttcg 360 ttccgaaagc ttagcaccat gagatctgca tctatcctct ccgcggcact ggctgccttt 420 gctcccctgg cctcggccgc ggacgccgtt tctggcgccg ctgaaggctt tgccaagggc 480 gtcactggcg gtggcagcgc cactcccgtc tacccttcca ccactgccga gcttgcctcc 540 tacctcaagg actcttccgc tcgcgtcatt gtcctgacca agacctttga cttcaccggt 600 accgagggaa ctaccaccga gaccggctgc gcaccttacg gcactgctgc tgcctgccag 660 gtcgctatca acaaggacaa ctggttcgta aacaatttga aacattgttt cttgcattgt 720 cactgatatc gaggttgtca ggtgcaccaa ctaccagccc aacgccccca aggtctctgt 780 cagctacgac aaggtaggaa atcgaacagg aattgtttct aagcttctct aacacagcca 840 ggccccgttc aaccccctca ttgtcggcag caacaagtct ctgatcggcc aaggatctaa 900 gggtgtcatt aagggcaagg gtcttcgcat caccaactcg gcgaagaacg ttattatcca 960 gaacgtatgt tgagtctttg actaggactc agttctcgga actctcagct aatgaaacta 1020 gatccacatc acgaacctga accccaagta cgtctgggga ggtgatgcca tctctctgga 1080 cggcaccgac cttgtctggt tcgaccacgt taagacctcc ttgatcggtc gtcagcacat 1140 tgtcctcgga aacggtgctt ccaaccgtgt caccatctcc aacaacgaga ttgacggctc 1200 tacctcctgg tctgccacct gcgataacca ccactactgg ggtgtctacc tgaccggcag 1260 caacgacatg gtcaccttca gcagtaagac atgctttgcc gcaatacctc ccagcctaag 1320 ttgccccaag cgtaacgcca ttacttccag agaactacat ccaccacacc tccggccgtt 1380 cccccaagat cgctggcaac tcgtacgtcc aactttgata tcccgatttg acacagcgtc 1440 atcatcgtgc ccgaagatgt ctaaactaac gttttttgcc ccgaacagtc tcgttcacat 1500 ctcaggcaat tatttctatg ctaacagcgg tacgtatctt tctatattgc aagcttttaa 1560 agtatttcat gatgttgtga ctcgttctac aacttctatg cttggttttc tgcacctccg 1620 ggcttcggga cggacccgac tcggcgaagt gggtcagaga gtgcacgggc cacccggcct 1680 agccatgtac caccagacgg gcaggcatag tgcctcttcc cattttgtgt cattcagaag 1740 acagacttca gatggctaac atttttcttt acaggtcacg ccatggaggc cgatgctggt 1800 gccaaggttg tcctcgaggg caacgtcttc cagaacgtag ttgctgccat gcagtctggt 1860 ctggccggca aggtcttctc cagccccgat gccaacacca acgctcagtg ctccagctac 1920 ctcggccaca cctgccagct caacgcttac ggcagctctg gctctctctc cggctccgac 1980 accagcattc tctccagctt ctctggcaag aacgttgctg ccactgtcac cgccaacgac 2040 gccaagaacg tccccaacac cgctggcttt ggaaagatct aagctttggg tgacgggatt 2100 gtctctggcc gggatgaggc tctggaggag tcgcctggtt tcagttgaag tggttgagag 2160 gaagcaaggg ggttgagtca aggcacacta gtgaccaacg acagattcat gtacatatct 2220 tactttttac cgtcgaggac gtaaatacta tgcttgatgc atcaattctg ctatatatac 2280 tgtcccctat tgcggaattg acgagttgct cttgaaacaa catcagtagg aatcaagccg 2340 agaccttgcc gtttttgatg tgtctgcaca gcttcaatta tctgtgtttg ccaacgactt 2400 cgatccaggg gacgacaaga accagaggat tacaaccagt aagagaccaa tatttgcggt 2460 aaataacggg aaggcgataa tttgcaaact caataatccg ccttgaatag gcattaaccc 2520 ctctgtgtga agagcacctc aattcacata gattacccaa cggttcaaca tggaatgacc 2580 ttcaaacaca caggatcaag ctt 2603 // |
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