 |
|
EBI DbfetchID L22690; SV 1; linear; genomic DNA; STD; PRO; 2700 BP. XX AC L22690; XX DT 21-NOV-1993 (Rel. 37, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 6) XX DE Rickettsia rickettsii rifampicin resistance (firA) gene, and DE UDP-N-acetylglucosamine acyltransferase (lpxA) gene, complete cds. XX KW firA gene; lpxA gene; rifampicin resistance; KW UDP-N-acetylglucosamine acyltransferase. XX OS Rickettsia rickettsii OC Bacteria; Proteobacteria; Alphaproteobacteria; Rickettsiales; OC Rickettsiaceae; Rickettsieae; Rickettsia; spotted fever group. XX RN [1] RP 1-2700 RX DOI; 10.1016/0378-1119(94)90739-0 RX PUBMED; 8125326. RA Shaw E.I., Wood D.O.; RT "Characterization of a Rickettsia rickettsii DNA fragment analogous to the RT fir A-ORF17-lpxA region of Escherichia coli"; RL Gene 140(1):109-113(1994). XX FH Key Location/Qualifiers FH FT source 1..2700 FT /organism="Rickettsia rickettsii" FT /mol_type="genomic DNA" FT /db_xref="taxon:783" FT CDS 43..1080 FT /codon_start=1 FT /transl_table=11 FT /gene="firA" FT /product="rifampicin resistance protein" FT /note="putative" FT /db_xref="GOA:P32202" FT /db_xref="InterPro:IPR007691" FT /db_xref="UniProtKB/Swiss-Prot:P32202" FT /protein_id="AAA26384.1" FT /translation="MVSSNFYKNLGPRKLTAIIDFLHDIIAPPKIEDIAIHDIKILQEA FT SPNDISFLSNPKYSEFLKTTKAAACIVPKNFTGEANPNTVLLHAQNSYFAYGKLIDFFY FT APIKSYPTKIMKSAIVADSATIGKNCYIGHNVVIEDDVIIGDNSIIEAGSFIGRGVNIG FT RNARIEQHVSINYAIIGDDVVILAGAKIGQDGFGFSTEKGVHHKIFHIGIVKIGNNVEI FT GANTTIDRGSLQDTIIKDLCRIDNLVQIGHGVKIGKGSIIVAQTGIAGSSTIGKYCALG FT GQVGIAGHLNIGDGAQVAAQGGVAQNIEAGKIVGGSPAIPIMDWHRQSIIMKQLLKTSN FT SKLKK" FT CDS 1276..1713 FT /codon_start=1 FT /transl_table=11 FT /function="unknown" FT /label=ORF FT /note="putative" FT /db_xref="GOA:P32204" FT /db_xref="InterPro:IPR010084" FT /db_xref="UniProtKB/Swiss-Prot:P32204" FT /protein_id="AAA26385.1" FT /translation="MIIDITEIMDWIPHRYPFLLVDRVLKIDPNKSITGIKNVTVNEPQ FT FTGHFPARPVMPGVLMVEAMAQLAAILVAKSLGSTKNKEVFLMTIENAKFRRIVQPGDT FT MHIHAVIDQQRANVWKFSSTVTVEGEIAAESKFTAMIKDKT" FT CDS 1720..2514 FT /codon_start=1 FT /transl_table=11 FT /gene="lpxA" FT /product="UDP-N-acetylglucosamine acyltransferase" FT /note="putative" FT /db_xref="GOA:P32199" FT /db_xref="HSSP:1LXA" FT /db_xref="InterPro:IPR001451" FT /db_xref="UniProtKB/Swiss-Prot:P32199" FT /protein_id="AAA26386.1" FT /translation="MSNSNIHTTAVIAEGAKLGKNVKIGPYCIIGPEVVLNDNVELKSH FT VVIEGITEIGENTVIYPFASIGQPPQILKYANERSSTIIGSNNTIREYVTVQAGSQGGG FT MMTRVGNNNLFMVGVHIGHDCKIGNNVVFANYVSLAGHIGVGDYAIIGGLSAVHQYARI FT GEYSMIGGLSPVGADVIPFGLVSSKRAVLEGLNLIGMNRKGFDKVKSLSALKAIEEIFS FT GEGNFAERIKQVAEKYNNNSIVIQIIDFLNQDSSRAFCRFEK" XX SQ Sequence 2700 BP; 944 A; 411 C; 546 G; 799 T; 0 other; cacttatata ctgtcgctaa tgattaattt gcttaaagtt atatggtaag tagtaatttt 60 tataaaaatc tagggccacg aaaactaaca gcaattatag attttttaca cgatattata 120 gcacctccta agattgaaga tatagctatt catgatatta aaattctgca ggaagcatca 180 ccaaatgata ttagcttttt aagcaatcct aaatactccg aatttttaaa aactaccaaa 240 gctgctgctt gtatagtgcc gaaaaatttt acgggagaag caaatccaaa tactgtttta 300 ttacacgccc agaactcata ttttgcttac ggcaaattaa tagatttttt ttatgctcct 360 attaaatcat accctactaa aataatgaaa tccgctattg ttgcagattc ggcgactatc 420 ggaaaaaatt gttatatagg tcacaatgta gttattgaag acgatgttat tataggtgat 480 aatagtatta tagaagctgg aagttttata ggtagaggag taaatatcgg cagaaacgct 540 agaatagaac aacatgtttc aataaattat gcaattatag gcgacgacgt cgtaatactt 600 gcaggtgcaa aaattggaca ggacgggttt ggattttcta ccgaaaaagg cgtacatcac 660 aaaatatttc atataggaat agttaaaatc ggcaataatg ttgaaattgg tgcaaacact 720 actattgata gaggatcact tcaagataca attataaaag atttatgccg catagataat 780 ttagtacaaa tagggcatgg cgtcaaaata ggtaaaggct ctattatcgt agcacagaca 840 ggtatagcag gaagtagcac gatcggtaaa tattgtgctc ttggagggca agtaggaatc 900 gccggacatc taaatatagg cgacggggca caggtagcgg cacaaggcgg tgtagcacaa 960 aatatagaag caggtaaaat tgtcggcggc agccctgcaa ttcctattat ggattggcat 1020 agacaatcta ttattatgaa acaattacta aagacctcta atagcaaatt aaaaaagtag 1080 cttgctattg aaaagagctt tgttgttgca tgaatacctg agtcgtcatt gtgagcagcc 1140 ataggctacg gtggcaatcc aaaaaaatta gcaaaaagtg ctgattttag tactttttac 1200 tagattgctt cgtcaattat ttcataattt cctcgcaatg acggaaaatt tacattaaag 1260 aagagatcta aataaatgat catagatatt accgaaatca tggattggat acctcatcgc 1320 tatccatttt tattagtaga tagagtactt aaaatcgatc ctaacaaatc aataacaggt 1380 attaaaaacg ttactgttaa cgaaccgcaa tttacaggac attttccggc aagacctgtt 1440 atgcccggtg ttctaatggt tgaggctatg gcacaattag ctgctatatt agttgctaaa 1500 tctttaggtt ctactaagaa taaagaagtg tttttaatga ctatcgaaaa tgcaaaattt 1560 cgtagaattg ttcagccggg ggatactatg catatccacg ctgttattga tcagcaaaga 1620 gctaacgtat ggaaattttc aagtacggtt acggtcgaag gtgaaatagc tgcagaaagc 1680 aagtttaccg caatgattaa agataaaaca tagggacaag tgtcaaattc taatatccat 1740 actacagctg taattgcaga aggtgcaaag cttggtaaaa acgtaaaaat cggaccgtat 1800 tgtattatag gtcctgaagt tgtgcttaat gacaatgtcg agctaaaatc ccatgtagta 1860 attgaaggga ttaccgaaat cggcgaaaat accgtaatct atccttttgc atcaataggt 1920 caacctccac aaatcttaaa atatgctaat gagcgatcaa gcacaataat tggctctaat 1980 aatactatta gagaatatgt tacggtacaa gcaggaagcc aaggcggcgg aatgatgaca 2040 agagtaggaa ataataattt atttatggtc ggcgtccata taggtcatga ttgtaaaatc 2100 ggcaataatg tagtatttgc taattatgta agcctagcag gtcatattgg ggtaggtgat 2160 tatgcaataa ttggcggact gtctgccgta catcaatatg ctagaatcgg tgaatattcg 2220 atgattggcg ggctatcgcc ggtcggagca gatgtaatac cgtttgggct tgtaagtagc 2280 aaacgtgcgg tgcttgaggg cttaaatcta atcggtatga atagaaaagg gtttgataaa 2340 gtaaagtctt taagtgcttt aaaagctatc gaagaaatct tctcaggtga aggtaatttt 2400 gctgagcgta taaaacaagt tgctgaaaaa tataacaata attctatagt aatacaaatt 2460 atcgattttc ttaatcaaga tagtagtaga gcattttgtc gttttgagaa gtaaatttat 2520 ttaactagcg atatgtaaca ctttgtgtta caatatcctg atgccaactt atggttaaaa 2580 cacaatgaag aaagttggtt agatgaatgg aaataataga aattaaaaaa agatatattg 2640 ttgcttggtg taatatctgg agattatggt aaacctcacc ccgctgttgt tgttcaatct 2700 // |
|