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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   L20774; SV 1; linear; mRNA; STD; MAM; 1344 BP.
XX
AC   L20774;
XX
DT   29-JAN-1994 (Rel. 38, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 5)
XX
DE   Sminthopsis macroura pyruvate dehydrogenase E1-alpha subunit (PDHA1) mRNA,
DE   3' end.
XX
KW   pyruvate dehydrogenase E1-alpha subunit.
XX
OS   Sminthopsis macroura (stripe-faced dunnart)
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Metatheria; Dasyuromorphia; Dasyuridae; Sminthopsis.
XX
RN   [1]
RP   1-1344
RX   DOI; 10.1016/S0888-7543(05)80366-0
RX   PUBMED; 8307573.
RA   Fitzgerald J., Wilcox S.A., Graves J.A., Dahl H.-H.M.;
RT   "A eutherian X-linked gene, PDHA1, is autosomal in marsupials: a model for
RT   the evolution of a second, testis-specific variant in eutherian mammals";
RL   Genomics 18(3):636-642(1993).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1344
FT                   /organism="Sminthopsis macroura"
FT                   /mol_type="mRNA"
FT                   /dev_stage="adult"
FT                   /tissue_lib="lambda ZAP"
FT                   /tissue_type="testis"
FT                   /db_xref="taxon:9302"
FT   CDS             <20..1113
FT                   /codon_start=3
FT                   /standard_name="PDHA1"
FT                   /product="pyruvate dehydrogenase E1-alpha subunit"
FT                   /EC_number="1.2.4.1"
FT                   /db_xref="GOA:P52900"
FT                   /db_xref="HSSP:1NI4"
FT                   /db_xref="InterPro:IPR017597"
FT                   /db_xref="UniProtKB/Swiss-Prot:P52900"
FT                   /protein_id="AAA31589.1"
FT                   /translation="RNFANDATFDIKKCDVHRLEEGPPTTAVLTREEGLKYYKIMQTVR
FT                   RMELKADQLYKQKIIRGFCHLYDGQEACCMGLEAGINPTDHVITAYRAHGFTYTRGLPV
FT                   REILAELTGRRGGCAKGKGGSMHMYAKNFYGGNGIVGAQVPLGVGIALACKYNEKDEIC
FT                   LTLYGDGAANQGQIFEAYNMAALWKLPCIFICENNRYGMGTSVERAAASTDYYKRGDFI
FT                   PGIMVDGMDVLCVREATKFAAAYCRSGKGPMLMELQTYRYHGHSMSDPGVSYRTREEIQ
FT                   EVRSKSDPIMLLKDRMVNNNLASIEELKEIDVEVRKEIEDAAQFATADPEPPLEELGYH
FT                   IYSRDPPFEVRGANQWIKYKSVS"
FT   misc_binding    580..585
FT                   /bound_moiety="thiamine pyrophosphate"
FT   3'UTR           1114..1330
FT   polyA_signal    1314
XX
SQ   Sequence 1344 BP; 429 A; 228 C; 317 G; 370 T; 0 other;
     ggaagagtgc tactggcatc ccgtaacttt gcaaatgatg ctacctttga tattaagaaa        60
     tgtgacgttc atcggcttga ggaaggtccc cccaccacag cagttctcac tagagaggaa       120
     ggactcaaat actataagat catgcagact gtccgtcgga tggaattgaa agcagaccag       180
     ctatataagc aaaagattat ccgtgggttc tgccacttgt atgatggtca ggaagcttgt       240
     tgtatggggc ttgaagctgg cataaatcct acagatcatg ttattacagc ctatcgagct       300
     catggcttta catatactcg tggacttcct gttcgagaaa ttctggcaga gcttacagga       360
     agaagagggg gatgtgctaa aggaaaggga ggatctatgc acatgtacgc caagaacttc       420
     tacggtggca atggcattgt tggagctcag gtacctctag gagtcggtat tgccctcgcc       480
     tgtaagtaca atgaaaaaga tgagatttgt ttgactttgt atggagatgg tgctgctaat       540
     cagggtcaaa tatttgaagc ttacaatatg gcagctttgt ggaaattgcc ttgtattttc       600
     atttgtgaga ataaccgata tggaatggga acttctgtag agagagcagc agccagcact       660
     gactattaca aaagaggaga ctttattcca ggaataatgg tagatggtat ggatgttctt       720
     tgtgttcgtg aagcaacaaa atttgcagct gcctactgta gatcaggaaa gggccccatg       780
     ttgatggaac tacagacata tcgttatcat ggacacagca tgagtgatcc tggtgtcagt       840
     tatcgtactc gggaagaaat tcaggaagtg aggagtaaga gcgatcctat catgcttcta       900
     aaagacagaa tggttaacaa caatcttgcc agtattgaag aattaaagga aattgatgtt       960
     gaagtaagga aagagattga ggatgctgcc cagtttgcta cagcggatcc agaaccacct      1020
     ttggaagaat taggttatca tatctactcc agagatccac cttttgaagt tcgaggagca      1080
     aatcagtgga tcaaatacaa atctgtcagc taaaggaagt atgtgttgaa tgtatacaag      1140
     gcctttaatg gaaatttatc ttctcagttt taagaaacta attgttagat ctaaggaaag      1200
     gggtgaacct tccaaaacca aacattttgc attgtcatta gaagatacta tgccttaaat      1260
     tcaaggtaac tagttacatc catgctatat ttatacatta tgttaattgc tttattaaag      1320
     gaatagaacc aaaaaaaaaa aaaa                                             1344
//
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