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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   L19299; SV 1; linear; genomic DNA; STD; PRO; 1656 BP.
XX
AC   L19299;
XX
DT   15-JUN-1993 (Rel. 36, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 6)
XX
DE   Aeromonas hydrophila alpha-amylase (amyA) gene, complete cds.
XX
KW   alpha-amylase.
XX
OS   Aeromonas hydrophila
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales;
OC   Aeromonadaceae; Aeromonas.
XX
RN   [1]
RP   1-1656
RX   PUBMED; 8126440.
RA   Chang M.C., Chang J.C., Chen J.P.;
RT   "Cloning and nucleotide sequence of an extracellular alpha-amylase gene
RT   from Aeromonas hydrophila MCC-1";
RL   J. Gen. Microbiol. 139(12):3215-3223(1993).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1656
FT                   /organism="Aeromonas hydrophila"
FT                   /strain="MCC-1"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:644"
FT   -35_signal      152..157
FT                   /gene="amyA"
FT   RBS             176..181
FT                   /gene="amyA"
FT   sig_peptide     211..282
FT                   /gene="amyA"
FT   CDS             211..1542
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="amyA"
FT                   /product="alpha-amylase"
FT                   /db_xref="GOA:P41131"
FT                   /db_xref="HSSP:1B0I"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/Swiss-Prot:P41131"
FT                   /protein_id="AAA21016.1"
FT                   /translation="MHNTLFRTALLAAALGSFSHTASAEGVMVHLFEWKFNDIANECET
FT                   VLGPKGFGGVQVSPPAEHKQGSQVWWTVYQPVSYKNFNSFGGCEAELRSMIARCNAAGV
FT                   KVYADAVFNHMASGSGTATGGGSYNSGQYQYPQFGYNDFHHSGDITNYGDSNNVWNGAL
FT                   YGLPDLNTGSSYVQDQIATYMKTLLGWGVAGFRIDAAKHMAPADVKAILDKAGSPRAYL
FT                   EVIGAGGESPDIQPGRYTYIDTVTEFKYGTDLAANFNGQIKNLKTLGESWGLLPSNKAF
FT                   VFVDNHDPERAHGGGGMLTFMQGARYDLANTFMLAWPYGWKQVMSAYRFENMGTYETDK
FT                   GAPGSTPCTDSQWNCEQRRPTIMNMVLFRNRTEGQPVSNWWDNGNNQIAFSRGTRASSP
FT                   STTRAARWWPRCRRSRPASTATSWGAMTTAAAVMSPSTAAARPA"
FT   mat_peptide     283..1539
FT                   /gene="amyA"
FT                   /product="alpha-amylase"
XX
SQ   Sequence 1656 BP; 362 A; 546 C; 467 G; 281 T; 0 other;
     gatctcgcac cgatctgccc ccctctgccc cctcctgctg ccaccgaatg gcatgaaagc        60
     attttcattc acatttctta attaattcag cctgttcgat tttcaaccac atcgatttca       120
     tgaatgctac ggagctgaac gaggttgttt gttgtccgtt cgactacacg acagttatac       180
     gtcaataaca agatcgaagg gaaaatcgtc atgcacaaca cactgtttcg aaccgccctg       240
     ctggcggcgg cactcggctc tttcagccac actgccagcg ccgaaggagt catggttcac       300
     ctgttcgaat ggaagttcaa cgacatcgcc aacgagtgcg agaccgtgct cgggcccaag       360
     gggttcggtg gcgtccaggt cagcccaccc gccgagcaca agcagggcag ccaggtctgg       420
     tggaccgtct atcaaccggt cagctacaag aatttcaaca gcttcggcgg atgcgaggca       480
     gagctcagga gcatgatcgc ccgctgcaac gcggccgggg tcaaggtcta tgccgacgcc       540
     gtcttcaacc acatggcatc gggttcgggc accgccaccg gcggcggcag ctacaactcg       600
     gggcaatacc aatatcccca gttcggctac aacgacttcc atcacagcgg cgacatcacc       660
     aactacggtg acagcaacaa cgtctggaac ggcgccctct acggcctgcc ggacctcaat       720
     accggctcat cctacgtcca ggatcagatc gccacctaca tgaagaccct gctcggctgg       780
     ggcgtggcgg gctttcgcat cgatgcggcc aagcacatgg cgccggccga tgtgaaggcc       840
     atcctcgaca aggcaggcag ccccagggcc tacctggagg tgatcggcgc aggcggggag       900
     tcccccgaca ttcagccggg ccgctacacc tacatcgaca ccgtcaccga gttcaaatac       960
     ggcaccgatc tcgccgccaa cttcaacggc cagatcaaga acctcaaaac cctgggcgag      1020
     agctggggcc tgctcccctc caacaaggcc ttcgtcttcg tggacaacca cgatcccgaa      1080
     cgcgcgcacg gcggtggcgg catgctcacc ttcatgcagg gtgcccgcta cgatctggcc      1140
     aacaccttca tgctggcctg gccctatggc tggaagcagg tgatgtcggc gtatcgcttt      1200
     gaaaacatgg gcacctatga aaccgacaag ggggcgccgg gcagcacgcc ctgcacggac      1260
     agccagtgga actgcgaaca gcgccgaccg accatcatga acatggtcct gttccgcaac      1320
     cggaccgaag gccagcccgt cagcaactgg tgggacaacg gcaacaacca gatcgccttc      1380
     agccgcggta caagggcttc gtcgccatca acaacgagag cggcacgctg gtggcctcgg      1440
     tgcagacgct cgcggccggc gagtactgca acctcctggg gggcaatgac tactgcagcg      1500
     gcggttatgt caccgtcgac ggcagcggca aggccagcct gaacgattcc ccggcatgaa      1560
     gcggccgcca tcatgccggt tgcaccaagg ccagcccctg cggcggttcc gtcctgccgg      1620
     gcaacaagtt cagcagcatg aaccgtggcg cggtac                                1656
//
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