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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   L14597; SV 1; linear; unassigned DNA; STD; PRO; 1786 BP.
XX
AC   L14597;
XX
DT   22-APR-1993 (Rel. 35, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 5)
XX
DE   Pseudomonas aeruginosa alginate lyase (algL) gene, complete cds.
XX
KW   alginate lyase; algL gene.
XX
OS   Pseudomonas aeruginosa
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas.
XX
RN   [1]
RP   1-1786
RX   DOI; 10.1016/0378-1119(93)90662-M
RX   PUBMED; 8370530.
RA   Boyd A., Ghosh M., May T.B., Shinabarger D., Keogh R., Chakrabarty A.M.;
RT   "Sequence of the algL gene of Pseudomonas aeruginosa and purification of
RT   its alginate lyase product";
RL   Gene 131(1):1-8(1993).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1786
FT                   /organism="Pseudomonas aeruginosa"
FT                   /map="34 min."
FT                   /strain="8830"
FT                   /mol_type="unassigned DNA"
FT                   /db_xref="taxon:287"
FT   RBS             452..457
FT                   /gene="algL"
FT                   /note="putative"
FT   sig_peptide     463..603
FT                   /gene="algL"
FT   CDS             463..1569
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="algL"
FT                   /product="alginate lyase"
FT                   /note="precursor protein"
FT                   /db_xref="GOA:Q06749"
FT                   /db_xref="InterPro:IPR008397"
FT                   /db_xref="InterPro:IPR008929"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q06749"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="AAA71990.1"
FT                   /translation="MKTSHLIRIALPGALAAALLASQVSQAADLVPPPGYYAAVGERKG
FT                   SAGSCPAVPPPYTGSLVFTSKYEGSDSARATLNVKAEKTFRSQIKDITDMERGATKLVT
FT                   QYMRSGRDGDLACALNWMSAWARAGALQSDDFNHTGKSMRKWALGSLSGAYMRLKFSSS
FT                   RPLAAHAEQSREIEDWFARLGTQVVRDWSGLPLKKINNHSYWAAWSVMSTAVVTNRRDL
FT                   FDWAVSEFKVAANQVDEQGFLPNELKRRQRALAYHNYALPPLAMIAPFAQVNGVDLRQE
FT                   NHGALQRLAERVMKGVDDEETFEEKTGEDQDMTDLKVDNKYAWLEPYCALYRCEPNACS
FT                   RPKKDREPFNSFRLGGEVTRVFSREGGS"
FT   mat_peptide     604..1566
FT                   /gene="algL"
FT                   /standard_name="AlgL"
FT                   /product="alginate lyase"
XX
SQ   Sequence 1786 BP; 353 A; 627 C; 578 G; 228 T; 0 other;
     gaattcgcca cccactacga catggcgcag aagagcttct accgccaggc catgccgctg        60
     gtggacaacg gctgctccgg ccggaagacc gtactcagcc gcaaggtcaa gctgcgccag       120
     ggccgcaacg aggtgctgct gaacagcgcc gcgctaccga tccgtagcgg cagctacgtc       180
     gccgacgtga cctacagcga cccttcggta cacgagttga agaacaccat ctggtacatg       240
     aacggccgcc gcgagcagtt gaagatcgag cagtcgaaag ccgtcgatac cggcggccgc       300
     tacgtcttcc aactgcgcaa cgacagcgac tgggccgacc agcagttcct ttccctggaa       360
     atcgaagcgc cggaggacat gccccagggc ctggaggtcc aggccagcat ctgccaggcg       420
     gcgcccgcca aggccagcca gtcggtggcc gggaggtaaa cgatgaaaac gtcccacctg       480
     atccgtatcg ccctgcccgg tgccctcgcc gcggcattgc tcgccagcca agtcagccag       540
     gccgccgacc tggtaccccc gcccggctac tacgcggcgg tcggcgagcg caagggcagc       600
     gccggcagct gccccgcggt gccgccgccg tataccggca gcctggtctt caccagcaag       660
     tacgaaggct ccgattcggc gcgggcgacc ctcaacgtca aggcggagaa gaccttccgc       720
     tcgcagatca aggacatcac cgacatggag cgcggcgcta ccaagctggt cacccagtac       780
     atgcgcagcg gccgcgacgg cgacctggcc tgcgcactga actggatgag cgcctgggcc       840
     cgcgccggcg ccctgcagag cgacgacttc aaccacaccg gcaagtccat gcgcaaatgg       900
     gcgctgggca gcctctccgg cgcctacatg cgcctgaagt tctccagctc gcggccgctc       960
     gcggcccacg ccgagcagag ccgggaaatc gaggactggt tcgcccggct cggcacccag      1020
     gtagtccgcg actggagcgg cctgccgctg aagaagatca acaaccattc ctactgggcg      1080
     gcctggtcgg tgatgtccac cgcggtggtg accaaccgcc gcgacctctt cgactgggcg      1140
     gtgagcgagt tcaaggtcgc cgccaaccag gtcgacgagc agggcttcct gcccaacgaa      1200
     ctcaagcgcc gccagcgcgc cctcgcctac cacaactatg cgctgccacc gctggcgatg      1260
     atcgcgccgt tcgcccaggt caacggcgtc gacctgcgcc aggagaacca cggcgccctg      1320
     cagcgcctgg ccgagcgggt gatgaaggga gtcgacgacg aggaaacctt cgaggagaag      1380
     accggcgagg accaggacat gaccgacctc aaggtcgaca acaagtacgc ctggctggag      1440
     ccctactgcg ccctctaccg ctgcgagccg aacgcatgct cgaggcccaa gaaggaccgc      1500
     gagccgttca acagtttccg cctcggcggc gaagtgacgc gggtgttcag ccgcgaaggg      1560
     ggaagttgag ggcgtggcgg gaagcgggcg cagaggccgg gggccacgcg cccctctacc      1620
     ccgctcgccg accaggcgcc agaccccgac ccatgcgcga cagacgcggg cgggcgcaac      1680
     accttaggca acaccacggg gaggaaaacg gcgggtcgtc ccgcctttcc tcgagcgctc      1740
     cagggcgcgg aaaggcaggg ccgacctgaa tggttgacgc tctaga                     1786
//
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