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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   L12967; SV 1; linear; genomic DNA; STD; PRO; 1768 BP.
XX
AC   L12967;
XX
DT   19-MAR-1993 (Rel. 35, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 5)
XX
DE   Bacillus sp. xylose isomerase (xylA) gene, complete cds.
XX
KW   xylose isomerase.
XX
OS   Bacillus sp.
OC   Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
XX
RN   [1]
RP   1-1768
RX   PUBMED; 7663444.
RA   Liao W.X., Earnest L., Kok S.L., Jeyaseelan K.;
RT   "Molecular cloning and characterization of the xylose isomerase gene from a
RT   thermophilic Bacillus species";
RL   Biochem. Mol. Biol. Int. 36(2):401-410(1995).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1768
FT                   /organism="Bacillus sp."
FT                   /strain="LW2"
FT                   /mol_type="genomic DNA"
FT                   /tissue_lib="EMBL-3"
FT                   /db_xref="taxon:1409"
FT   repeat_region   188..204
FT                   /gene="xylA"
FT   repeat_region   215..230
FT                   /gene="xylA"
FT   RBS             233..238
FT                   /gene="xylA"
FT   CDS             247..1572
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="xylA"
FT                   /standard_name="glucose isomerase"
FT                   /product="xylose isomerase"
FT                   /EC_number="5.3.1.5"
FT                   /db_xref="GOA:P54272"
FT                   /db_xref="HSSP:1A0D"
FT                   /db_xref="InterPro:IPR018115"
FT                   /db_xref="UniProtKB/Swiss-Prot:P54272"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="AAA99461.1"
FT                   /translation="MPYFDNISTIAYEGPASKNPLAFKFYNPEEKVGDKTMEEHLRFSV
FT                   AYWHTFTGDGSDPFGAGNMIRPWNKYSGMDLAKARVEAAFEFFEKLNIPFFCFHDVDIA
FT                   PEGETLKETYKNLDIIVDMIEEYMKTSKTKLLWNTANLFTHPRFVHGAATSCNADVFAY
FT                   AAAKVKKGLEIAKRLGAENYVFWGGREGYETLLNTDMKLELDNLARFLHMAVDYAKEIG
FT                   FDGQFLIEPKPKEPTKHQYDFDVATALAFLQTYGLKDYFKFNIEANHATLAGHTFEHEL
FT                   RVARIHGMLGSVDANQGDMLLGWDTDEFPTDLYSTTLAMYEILKNGGLGRGGLNFDAKV
FT                   RRGSFEPEDLFYAHIAGMDSFAVGLKVAHRLIEDRVFDEFIEERYKSYTEGIGREIVEG
FT                   TVDFHKLEAHALQLGEIQNQSGRQERLKTLLNQYLLEVCAAR"
XX
SQ   Sequence 1768 BP; 529 A; 317 C; 428 G; 494 T; 0 other;
     ttattatggc tagcatcgat aatgggatga gcatgatgaa catcgaaacc ttttggcaat        60
     ttattgtaaa aggattgatt cttattatcg ctgtctggat tgatatatcg agtaaaagcc       120
     gaactaacta attcatcggt gttttgaaga ttttagttaa aaatgctatt tacattttgc       180
     gtaaatccca atcattatga ttggtttatt ctactaataa acatttatta ataggaggaa       240
     tttgccatgc cttattttga caacatcagc accatcgcct atgaaggacc ggcgtctaaa       300
     aacccgcttg cgtttaagtt ttacaatccg gaagaaaaag tcggcgataa aacaatggaa       360
     gagcatttgc gtttttcggt tgcgtattgg catacgttta caggagatgg atcagatccg       420
     tttggggctg gcaatatgat ccgtccatgg aacaaataca gcggaatgga tttggccaaa       480
     gcgcgtgttg aagctgcttt tgagtttttt gaaaaattaa atattccatt tttctgtttc       540
     catgatgtgg atattgcccc agaaggagaa acattaaaag aaacatataa aaatttagat       600
     attatcgtag acatgattga agaatatatg aaaacaagca aaacgaagct gctttggaat       660
     acggcgaact tatttaccca tcctcgcttt gtccatggcg ccgccacttc ttgcaacgcc       720
     gatgtttttg cctatgcagc ggccaaagta aaaaaagggt tggaaattgc gaagcggtta       780
     ggagcggaaa actacgtatt ttggggcgga cgagaagggt atgaaacact attaaatacc       840
     gatatgaaac ttgagctgga caacttggcc cgcttcttgc atatggcggt ggattatgcg       900
     aaagaaatcg ggtttgacgg gcaattttta attgagccga agccgaaaga gccgacgaaa       960
     caccaatatg actttgatgt tgcgacagca ttggcatttt tgcaaacata cggactgaaa      1020
     gattacttta agttcaatat tgaagcgaac catgcaacgc tggcgggaca tacgtttgaa      1080
     catgaattgc gggtagcgcg cattcatggc atgttaggct ctgttgacgc aaaccaagga      1140
     gatatgttgt taggatggga tacggacgaa ttcccgacag acttatattc tacgactttg      1200
     gcaatgtatg aaattttgaa aaacggcggc cttggccgtg gcggtttgaa ttttgatgcg      1260
     aaagtaagaa gaggatcgtt tgagccggaa gatttgttct atgcccatat cgccggaatg      1320
     gacagttttg cggttggatt aaaagtagcc catcgattaa tagaagaccg cgtttttgat      1380
     gagtttattg aagaacggta caaaagttat acagaaggaa ttggccggga aatcgtcgaa      1440
     ggaacggtgg atttccataa attagaagca catgctttac aactagggga aatccaaaat      1500
     caatcgggca gacaagaacg gctgaaaaca ttgcttaacc aatatttgct tgaagtttgc      1560
     gcagcccgtt aatgaaaaga gggatcggtc ttggagcatg tcattggtgt ggatttaggg      1620
     acaagtgcgg taaaggtgct gcttgtggat ctttcacttt aacactctcc accgcccgtt      1680
     tcgctttcgt cattgacgcg cacaatgtca gcaccgagcg ccgccaattt ttcatgaaag      1740
     cggacatatc cgcggtccga gatgtctg                                         1768
//
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