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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   L11527; SV 1; linear; genomic DNA; STD; PRO; 1255 BP.
XX
AC   L11527;
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DT   31-AUG-1993 (Rel. 36, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 4)
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DE   Vibrio fischeri 3',5'-cyclic AMP phosphodiesterase (cpdP) gene, complete
DE   cds.
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KW   3',5'-cyclic AMP phosphodiesterase; cpdP gene.
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OS   Vibrio fischeri
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Aliivibrio.
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RN   [1]
RP   1-1255
RX   PUBMED; 8393003.
RA   Dunlap P.V., Callahan S.M.;
RT   "Characterization of a periplasmic 3':5'-cyclic nucleotide
RT   phosphodiesterase gene, cpdP, from the marine symbiotic bacterium Vibrio
RT   fischeri";
RL   J. Bacteriol. 175(15):4615-4624(1993).
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FH   Key             Location/Qualifiers
FH
FT   source          1..1255
FT                   /organism="Vibrio fischeri"
FT                   /strain="MJ-1"
FT                   /mol_type="genomic DNA"
FT                   /tissue_type="light organ"
FT                   /db_xref="taxon:668"
FT   CDS             143..1135
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="cpdP"
FT                   /label=ORF
FT                   /db_xref="GOA:Q56686"
FT                   /db_xref="InterPro:IPR000396"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q56686"
FT                   /protein_id="AAA27513.1"
FT                   /translation="MFKNKLAVLFTCLSVFSFSAQSGSFDTVTLGSKGGIQDGNLTAFL
FT                   IKSEADSNFVMLDAGSVVNGLIVSEQKGAFKDITVPDSSPYTKVGYLLKDRIKGYFISH
FT                   AHLDHVAGLIISSPDDSKKPIYGLAATNKDLMKNYFNWSAWPNFGNKGEGFKLNKYNYV
FT                   DLQPGVWSPVAETTMSVVSLPLSHSGGQSTVFILKDSEGDVFAYFGDTGPDEVEKSSAM
FT                   RTAWSVLAPFVKQGKLKGIIIEVSFTNETPDKSLFGHLTPNWLVKELSVLEDMNGKGSL
FT                   KDLNVAISHIKYSLKNSEDPKVIIKKQLVEVNDLGVNFIFPEQGDSLQF"
XX
SQ   Sequence 1255 BP; 391 A; 182 C; 260 G; 422 T; 0 other;
     agtagaacta tcaaattctg tggagcatac cgcttataat taccttctta tcaatagtct        60
     taaatattta atacatcatt catttatctc attgtattat ctgattgagc acaagggtgt       120
     gcagtattat ttaaggttgg atatgtttaa aaataaatta gcagtgttat ttacgtgttt       180
     gtctgtattt tctttttcgg ctcaatctgg gagttttgat accgttacgt tagggagtaa       240
     aggtgggatt caagatggta atttaacggc ttttttaatt aaaagtgagg cggattctaa       300
     ttttgttatg cttgatgcag gttctgttgt taatggatta attgtttcag agcagaaagg       360
     agcgtttaaa gatattaccg tcccagatag ttcgccttac accaaagtag gttacctatt       420
     aaaggatagg attaagggct actttattag tcatgctcat ttagaccatg ttgctggttt       480
     aattatctct tctcctgatg acagtaaaaa accgatatat ggattagcag cgacaaataa       540
     agatctcatg aagaattact ttaattggtc agcatggcct aattttggta acaaaggtga       600
     aggctttaaa ctgaacaaat acaattatgt ggatcttcaa ccgggcgttt ggagtccggt       660
     agctgaaaca acaatgagtg tggtgtcatt gcctttgtct cattctggtg ggcaatctac       720
     ggtatttatt ctaaaagaca gtgaagggga tgtatttgct tattttggtg atacaggacc       780
     tgatgaagta gagaaaagct cggcaatgag gactgcatgg tctgttttag ctccttttgt       840
     aaaacaaggg aagttaaagg ggattattat tgaagtttct tttaccaacg aaaccccaga       900
     taaatctttg tttggacact taacgccaaa ctggttagtt aaagaattaa gtgtacttga       960
     agacatgaat ggcaaaggct ctttaaaaga tctaaatgta gccataagcc acatcaaata      1020
     cagcttaaag aatagtgaag atcctaaagt aattattaaa aagcagttag tagaagtaaa      1080
     tgacttaggt gtaaatttca tttttcctga gcaaggtgat tcattgcagt tttaaaaaag      1140
     tcattgtaaa agtggatatg gtcaatacaa agaccatatc cacggatttg tttttatctc      1200
     ttaaatcgtc gtttctatct ttttaagcac ggcgatctca ttgggtacat caatg           1255
//
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