 |
|
EBI DbfetchID L11391; SV 1; linear; genomic DNA; STD; PRO; 3685 BP. XX AC L11391; XX DT 21-NOV-1995 (Rel. 45, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 3) XX DE Photobacterium phosphoreum riboflavin synthetase alpha subunit, 3, DE 4-dihydroxy-2-butanone-4-phosphate synthetase, riboflavin synthetase beta DE subunit, and GTP cyclohydrolase II genes, complete cds. XX KW 3,4-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KW riboflavin synthetase alpha subunit; riboflavin synthetase beta subunit. XX OS Photobacterium phosphoreum OC Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; OC Photobacterium. XX RN [1] RP 1-3685 RX PUBMED; 8144477. RA Lee C.Y., O'Kane D.J., Meighen E.A.; RT "Riboflavin synthesis genes are linked with the lux operon of RT Photobacterium phosphoreum"; RL J. Bacteriol. 176(7):2100-2104(1994). XX FH Key Location/Qualifiers FH FT source 1..3685 FT /organism="Photobacterium phosphoreum" FT /strain="NCMB 844" FT /mol_type="genomic DNA" FT /db_xref="taxon:659" FT CDS 369..1025 FT /codon_start=1 FT /transl_table=11 FT /product="riboflavin synthetase alpha subunit" FT /note="ORF I" FT /db_xref="GOA:P51961" FT /db_xref="InterPro:IPR001783" FT /db_xref="InterPro:IPR017938" FT /db_xref="UniProtKB/Swiss-Prot:P51961" FT /protein_id="AAA25628.1" FT /translation="MFTGIIEAVGNISAITSKGSDFEVSVNCDTLDLADVKIGDSIATN FT GICLTVVKLTANSYVADLSIETLSRTAFNYYKVGQAVNLEKAMLPTTRFGGHIVSGHVD FT AVAEVIECRTSGRAIDIWIRVPSQIEKYLSEKGSVTVDGVSLTVNAVTGNEFKLTIVPH FT TVVETTIADFKVGNKVNIEVDVLARYIERLLLVDKPEDKQSKISMDLLERNGFLL" FT CDS 1062..2153 FT /codon_start=1 FT /transl_table=11 FT /product="3,4-dihydroxy-2-butanone-4-phosphate synthase" FT /note="ORF II" FT /db_xref="GOA:P51962" FT /db_xref="InterPro:IPR000422" FT /db_xref="InterPro:IPR000926" FT /db_xref="InterPro:IPR016299" FT /db_xref="InterPro:IPR017945" FT /db_xref="UniProtKB/Swiss-Prot:P51962" FT /protein_id="AAA25629.1" FT /translation="MTLSTAQEIIEDIHQGKMVILMDDEDRENEGDLIIASDKVTPEAI FT NFMATYGRGLICLTLNKERCLQLELPMMVKSNTDKFATPFTISIEAASGVTTGISVNDR FT ARTVQAAIAATATAKDIVMPGHIFPLMAQDGGVLARAGHTEAGCDVARLAGLEPSSVIV FT EILNDDGTMARRPQLEVFAKKHGLKLGTVADLIEYRNKYETMIERISECKLNTEFGEFD FT MITYRDKINHQIHYALQKGNIEPNSQTLVRVHLQDTFKDILQTGSTRWTLPAAMERISS FT ENGVLVIVTKQEDPEMVISKIQNLALENKETPVVNSQSRQVGLGSQILSDLGIRKMRLL FT SSSSHLYHSLSGFGLEIVEYVCS" FT CDS 2274..2741 FT /codon_start=1 FT /transl_table=11 FT /product="riboflavin synthetase beta subunit" FT /note="ORF III" FT /db_xref="GOA:P51963" FT /db_xref="InterPro:IPR002180" FT /db_xref="UniProtKB/Swiss-Prot:P51963" FT /protein_id="AAA25630.1" FT /translation="MKVIEGAIVAPNAKVAIVIARFNSFINESLLSGALDTLKRQGQVS FT YDNITIIRCPGAYELPLVAQLTAKSDRYDAIIALGSVIRGGTHFEYVASECNKGLAQVA FT LDYNIPVAFGVLTVDYLEQAIERAGTKAGNKGAEAALMLLEMVNILAQVES" FT CDS 2974..3576 FT /codon_start=1 FT /transl_table=11 FT /product="GTP cyclohydrolase II" FT /note="ORF IV" FT /db_xref="GOA:P51618" FT /db_xref="InterPro:IPR000926" FT /db_xref="UniProtKB/Swiss-Prot:P51618" FT /protein_id="AAA25631.1" FT /translation="MVNVRERVSLKVGINSNAPAELLSFNGLESGKEHIALIFKDAYKA FT FVPLVRMHSECLTGDGFHSTRCDCGEQLDETIEIMAELGGIILYLRQEGRWGLGLYNKI FT DAYKLQSQGMDTYEANNHLGFDDDLREFSEAAQMLTALGIKDIRLVTNNPKKIKDLQQN FT GINIVEVVGTKAHLKEGNEGYLKAKASHGRHCFNFDK" XX SQ Sequence 3685 BP; 1205 A; 523 C; 748 G; 1209 T; 0 other; tacgtacctg ttttggaaaa ctttgacaat aattggtacg gaaaaaaagg caatgttatt 60 gatgcaataa tagaggactt tggtgattta tcagaatttg atatctatgt ttgcggccct 120 caaggtatga cacgtagtgt tcgtgaaaag ttaacatcac ttaaaaaagc tgatactgat 180 aaaatgtttg ccgatgcttt tgcatatatg tgatactaat ttaaattaat taaaatctaa 240 ctgatacctt aaagtttatc tgaaggtata ttgaattaaa ttattaactc tattttttgg 300 tttgtaatct caccaataaa tagagttatc accagacttt taattaactt taaactaaga 360 ggttgaatat gtttaccgga attattgagg ctgttggtaa tatatcggcc atcacttcaa 420 aaggatctga ttttgaagtc tcagttaatt gtgacacgtt agatctagct gatgtgaaaa 480 taggtgatag tattgctaca aacggtatat gtttaacggt agttaaactg acagccaata 540 gttatgtagc tgatctatct atagaaacat taagtcgaac tgcttttaat tattataaag 600 tgggccaagc cgttaattta gaaaaagcga tgttacctac aactcgtttt ggtggtcata 660 ttgtctctgg ccatgttgac gctgtcgctg aggtaattga atgtcgaact tctgggcgtg 720 cgatagatat ttggattaga gtaccatccc agatcgaaaa gtatctttcg gagaaaggtt 780 cagttacggt tgatggcgtt agtttaactg taaatgcagt tacaggtaac gagtttaaat 840 taacaattgt tccgcacact gtagttgaaa cgacaatcgc tgactttaaa gttggaaata 900 aagttaatat cgaagttgat gttcttgctc gttatattga gaggttattg ttagttgata 960 aaccagaaga taagcaatct aaaatatcaa tggatttatt agaaagaaat ggttttctct 1020 tataagtttc ccttcaatag aagataataa aaggaataat tatgacttta agtacagctc 1080 aagaaattat tgaggatatt caccaaggga aaatggtaat attaatggat gatgaagatc 1140 gcgaaaatga aggcgatctt atcattgcat cagataaagt aacgcctgaa gccataaatt 1200 ttatggcaac ttatggtcga ggtttaattt gcctgacatt aaataaagaa cgttgcctgc 1260 aattagaatt gccaatgatg gtgaagagta ataccgataa atttgccacc ccgtttacta 1320 tttctattga agctgcttct ggggttacaa ccggtatttc agtaaacgat agagcccgta 1380 ccgttcaagc ggctatagcg gcaacagcaa cggcgaaaga tatcgttatg ccaggacaca 1440 tttttccatt aatggctcaa gatggtggtg tattagctcg tgctggtcat actgaagctg 1500 gttgtgatgt tgcacgttta gcagggttag agccgtcaag tgttattgtt gaaatattga 1560 atgatgacgg tacgatggcg agacgtccgc agttagaagt ctttgctaaa aagcatggtt 1620 taaagttagg cactgttgcc gaccttattg aatatcgaaa taaatatgaa accatgattg 1680 aacgtatttc tgagtgtaaa ttgaatactg agtttggtga atttgatatg attacttatc 1740 gagataaaat taatcatcaa attcattatg cgttacagaa aggtaatatt gagcctaact 1800 ctcaaacttt agtacgagtg catttacaag atacattcaa agatattctg caaacaggat 1860 caactcgatg gacattaccg gcagcgatgg agcgtattag ttctgaaaat ggcgttctgg 1920 ttatagttac taaacaagaa gatcccgaaa tggtaatcag taaaattcag aatctagctt 1980 tggaaaataa agaaacacct gtcgtcaata gtcaatcacg tcaggtcgga ttaggttcac 2040 aaatattatc ggatcttggc attagaaaaa tgcgcttatt atcatctagt agtcaccttt 2100 atcattcatt atccggtttt ggtcttgaaa tagttgagta tgtgtgcagt taagatttta 2160 tttgatatag aaaaaactca ttaaatatag acggtcactc cctatgtctt atgcaggaat 2220 aaggctagcc gttatttata ctaaaattaa ttataaatat tataggaata accatgaagg 2280 taattgaagg cgccatcgta gcaccaaatg caaaagttgc cattgtaatt gcacgtttta 2340 atagttttat taatgaaagt ttattatctg gtgcgctcga cacattgaaa cgtcaaggtc 2400 aggttagtta tgataatatt acaatcattc gttgtcctgg agcttatgag ttgcctcttg 2460 ttgctcagtt aacggccaaa agtgaccgtt acgatgcaat tatagcctta ggttctgtca 2520 ttcgtggcgg aacgcatttt gaatacgtag ccagtgagtg taataaaggt ctagcacaag 2580 tcgcgttaga ttataatatt ccagttgctt ttggggtatt aaccgttgat taccttgaac 2640 aagccattga acgtgcaggt actaaagctg gtaataaagg agcagaagct gccttaatgt 2700 tacttgaaat ggttaatatt ttggctcaag ttgaatcttg atagaaaaga agcagcaata 2760 taatgagaat atgattttac catcgtaatt attataaaac tgtttactaa aattaaacta 2820 cgagtgttta attacactcg tttataaata tatttactta acgataatta aataatatat 2880 aagtaatatt agctgattaa gtttgttgtt attgagaaaa ataaatgctt ctttatttta 2940 cttagaagta tttaagaaat atttaggaat gttatggtca atgttaggga aagagtatcc 3000 ttaaaagtgg gtattaatag taatgctcct gctgagttgc tttcgtttaa tggccttgaa 3060 tcgggtaaag aacatatagc gctcattttt aaagatgcat ataaagcttt tgttccttta 3120 gttcgtatgc actctgagtg tttaactggt gatggttttc attctacacg ctgtgattgt 3180 ggagagcagt tagatgaaac cattgaaata atggctgagc taggtggaat tattttgtat 3240 ctacgccagg aaggccggtg gggattggga ctttataata agatcgatgc ttataagcta 3300 cagagtcaag gtatggatac ttatgaagcg aataatcatt taggttttga tgatgattta 3360 cgagagtttt ctgaagctgc tcaaatgctt acagctcttg gtattaagga tatacgctta 3420 gtaacaaaca atcctaagaa aatcaaagat ttacagcaaa atggtataaa tattgttgaa 3480 gttgtaggca ctaaagctca tttaaaagaa ggtaatgaag gatatttaaa agcgaaagct 3540 tctcatggcc gccattgctt taattttgat aaatgaatat tgaccctttt tatgaataaa 3600 attagcccgc ttttatcggg cttattttat ttaaaacata taaattagat taagtttatg 3660 cgcttaaaat ggtatattaa gatct 3685 // |
|