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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   L10425; SV 1; linear; genomic DNA; STD; PRO; 1522 BP.
XX
AC   L10425;
XX
DT   11-JUN-1993 (Rel. 36, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 5)
XX
DE   Bordetella avium beta-cystathionase-lyase (metC) gene, complete cds.
XX
KW   beta-cystathionase lyase; metC gene.
XX
OS   Bordetella avium
OC   Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
OC   Alcaligenaceae; Bordetella.
XX
RN   [1]
RP   1-1522
RX   PUBMED; 8463265.
RA   Gentry-Weeks C.R., Keith J.M., Thompson J.;
RT   "Toxicity of Bordetella avium beta-cystathionase toward MC3T3-E1 osteogenic
RT   cells";
RL   J. Biol. Chem. 268(10):7298-7314(1993).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1522
FT                   /organism="Bordetella avium"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:521"
FT   -35_signal      100..105
FT                   /gene="metC"
FT   -10_signal      121..126
FT                   /gene="metC"
FT   CDS             154..1344
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="metC"
FT                   /product="cystathionine beta-lyase"
FT                   /db_xref="GOA:Q07703"
FT                   /db_xref="HSSP:1GC0"
FT                   /db_xref="InterPro:IPR015422"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q07703"
FT                   /experiment="experimental evidence, no additional details
FT                   recorded"
FT                   /protein_id="AAA22978.1"
FT                   /translation="MSDTSAKHIDTLLQHLGSAPFNPDTGAAPVNLPSVRASTVRFQSL
FT                   AKLEDAQRRKAAGERASTYGRMGMDTHAALEQVFAELEGGTHCYLASSGLAGISMVFLS
FT                   LLSAGEHALVADCAYGPVHELHEAVLSRLGIDVTFFDAKADLASLVRPTTRLIFAEAPG
FT                   SLLFEMLDMPALARFAKQHDLILATDNTWGSGYIYRPLTLGAQVSVIAGTKYVGGHSDL
FT                   MLGAVVTNDEAIAKRLNRTQYALGYSVSADDAWLALRGVRTMPVRMAQHARHALEVCEF
FT                   LQNRPEVVRLYHPAWPADPGHALWQRDCSGSNGMLAVQLGLSPQAARDFVNALTLFGIG
FT                   FSWGGFESLVQLVTPGELARHQYWQGGSDALVRLHIGLESPADLIADLAQALDRAA"
FT   stem_loop       1361..1408
FT                   /gene="metC"
XX
SQ   Sequence 1522 BP; 235 A; 488 C; 481 G; 318 T; 0 other;
     caggggtagc atgggagcgg ggtcagagag tgatcaaaac cagcgctgcc atcatagggc        60
     aaagccatat tcctagcgcc aggtaatatc gattcaactt tgtgtaggcc tgctgcctgt       120
     tacgctttca ttctttcgtc tgccgcctct gccatgtctg acacctccgc taaacacatc       180
     gacaccctgt tgcagcatct gggtagcgcg cccttcaatc ccgacactgg cgccgcgccg       240
     gtcaatctgc catccgtgcg cgccagcact gtgcgttttc aaagtctggc caagctcgag       300
     gacgctcagc gccgcaaggc ggcgggcgaa cgcgcgtcta cctatgggcg catgggcatg       360
     gatacccacg ccgccctgga gcaggtgttt gcagagctgg agggtggcac gcattgctat       420
     ctggcttcgt ccgggctggc gggcatctcg atggtgtttc tgtcgctgtt gtcggccggc       480
     gaacatgccc tggtggcgga ttgcgcctat gggcccgtgc atgagctcca tgaggccgtg       540
     ctgtcgcgcc tgggcatcga cgtcaccttc ttcgacgcaa aggccgatct ggcaagcctc       600
     gtgcgtccca ctacgcggct gatctttgcc gaagcgcccg gctccctgct gttcgagatg       660
     ctggacatgc cggcgctggc ccgcttcgcc aaacaacatg acctgattct cgccaccgac       720
     aatacctggg gctcgggcta tatctaccgc ccgctcacgc tgggcgcgca ggtctctgtc       780
     atcgccggca ccaagtatgt gggcggacac tccgacctga tgttgggcgc ggtggtcacc       840
     aatgatgagg ccatcgccaa gcgcttgaac cgcacgcaat atgcgctggg ttattcggtc       900
     agcgccgatg atgcctggct cgccctgcgc ggggtgcgca ccatgcctgt gcgcatggcc       960
     caacatgcgc gccatgccct cgaagtctgc gagttcctgc aaaaccgtcc cgaggtcgta      1020
     cgcctctatc acccggcatg gccggccgat ccaggccatg ccctatggca gcgtgactgc      1080
     agcggctcga atggcatgtt ggcggtgcag ttaggcctgt cgccgcaggc cgcgcgggac      1140
     ttcgttaatg cgctgacgct gtttggcatc ggtttttcct gggggggctt cgagtccctg      1200
     gtgcaattgg tcacgccggg cgagttggcg cgccatcagt attggcaagg cggctcggac      1260
     gcgctggtgc gtctgcatat cggtctggaa tcgccggccg atcttattgc cgacctggcc      1320
     caggcgctgg accgcgccgc ctgagcgctc agctgcggcc ttgccgcttg cgccgccacg      1380
     tcgcgaactc ggcaggcgtg agcggcggcg agtatagata gccttggccc cattgcacgc      1440
     cgttgcgcgt caggtgctcg gcctgcgcgg cggtttctat gccttctgcc gtgagctcca      1500
     gcttaaggcg ttgacctagc gc                                               1522
//
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