 |
|
EBI DbfetchID L10036; SV 1; linear; genomic DNA; STD; PRO; 4142 BP. XX AC L10036; XX DT 03-FEB-1993 (Rel. 34, Created) DT 17-APR-2005 (Rel. 83, Last updated, Version 11) XX DE Anabaena PCC7120 DNA-binding protein (ntcA) gene, complete cds; and unknown DE genes. XX KW . XX OS Nostoc sp. PCC 7120 OC Bacteria; Cyanobacteria; Nostocales; Nostocaceae; Nostoc. XX RN [1] RP 1-4142 RX PUBMED; 8391534. RA Wei T.F., Ramasubramanian T.S., Pu F., Golden J.W.; RT "Anabaena sp. strain PCC 7120 bifA gene encoding a sequence-specific RT DNA-binding protein cloned by in vivo transcriptional interference RT selection"; RL J. Bacteriol. 175(13):4025-4035(1993). XX RN [2] RP 1-4142 RX PUBMED; 7913926. RA Wei T.F., Ramasubramanian T.S., Golden J.W.; RT "Anabaena sp. strain PCC 7120 ntcA gene required for growth on nitrate and RT heterocyst development"; RL J. Bacteriol. 176(15):4473-4482(1994). XX RN [3] RP 1-4142 RA Duan L.; RT ; RL Submitted (12-JAN-1999) to the EMBL/GenBank/DDBJ databases. RL Biology, Texas A&M University, College Station, TX 77843, USA XX FH Key Location/Qualifiers FH FT source 1..4142 FT /organism="Nostoc sp. PCC 7120" FT /mol_type="genomic DNA" FT /db_xref="taxon:103690" FT CDS complement(<1..498) FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="ORF5" FT /db_xref="GOA:Q05070" FT /db_xref="UniProtKB/Swiss-Prot:Q05070" FT /protein_id="AAD04182.1" FT /translation="MTTGYILIAAILILGGVIATVGDRIGTRVGKARLSLFNLRPKNTA FT VLVTILTGGLVSATTLAILFIADEGLRKGVFELEDIQKDLRQKREQLKVAEEQKTQVEI FT ERNKVNQELETTRTDKKQVETQRDQAKKEKLKAQQDLAQTQAQYQRTQSRLGQVVTQYQ FT KAI" FT CDS complement(828..1499) FT /codon_start=1 FT /transl_table=11 FT /gene="ntcA" FT /product="DNA-binding protein" FT /db_xref="GOA:P0A4U6" FT /db_xref="InterPro:IPR018335" FT /db_xref="UniProtKB/Swiss-Prot:P0A4U6" FT /protein_id="AAD04183.1" FT /translation="MIVTQDKALANVFRQMATGAFPPVVETFERNKTIFFPGDPAERVY FT FLLKGAVKLSRVYEAGEEITVALLRENSVFGVLSLLTGNKSDRFYHAVAFTPVELLSAP FT IEQVEQALKENPELSMLMLRGLSSRILQTEMMIETLAHRDMGSRLVSFLLILCRDFGVP FT CADGITIDLKLSHQAIAEAIGSTRVTVTRLLGDLREKKMISIHKKKITVHKPVTLSRQF FT T" FT CDS 2110..2904 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="ORF3; similar to EnvM protein encoded by Salmonella FT typhimurium" FT /db_xref="GOA:Q05069" FT /db_xref="HSSP:1DFI" FT /db_xref="InterPro:IPR016040" FT /db_xref="UniProtKB/Swiss-Prot:Q05069" FT /protein_id="AAD04184.1" FT /translation="MTTKISMLNLTGKNALVTGIANNRSIAWGIAQQLHAAGANLGITY FT LPDERGKFEKKVSELVEPLNPSLFLPCNVQNDEQIQSTFDTIRDKWGRLDILIHCLAFA FT NRDDLTGDFSQTSRAGFATALDISTFSLVQLSGAAKPLMTEGGSIITLSYLGGVRAVPN FT YNVMGVAKAGLEASVRYLASELGSQNIRVNAISAGPIRTLASSAVGGILDMIHHVEQVA FT PLRRTVTQLEVGNTAAFLASDLASGITGQVLYVDAGYEIMGM" FT CDS 3047..3676 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="ORF2; similar to HisB protein encoded by FT Azospirillum brasilense" FT /db_xref="GOA:Q05068" FT /db_xref="InterPro:IPR000807" FT /db_xref="UniProtKB/Swiss-Prot:Q05068" FT /protein_id="AAD04185.1" FT /translation="MQISDYPQLNLSSVPRIASVHRITGETNVQVTVNLDGTGICKAAT FT GIPFLDHMLHQISSHGLIDLDVQAKGDWEIDDHHTNEDVGITLGQALAKALGDRKGIVR FT FGNFLAPLDEALVQVALDFSGRPHLSYGLQIPTERVGTYDTQLVREFFVALVNHSQMTL FT HIRQLDGINSHHIIEATFKAFARAARMAIEVDPRRAGTIPSSKGVL" FT CDS 3863..>4142 FT /codon_start=1 FT /transl_table=11 FT /product="unknown" FT /note="ORF1" FT /db_xref="GOA:Q05067" FT /db_xref="HSSP:1L7V" FT /db_xref="InterPro:IPR003593" FT /db_xref="UniProtKB/Swiss-Prot:Q05067" FT /protein_id="AAD04186.2" FT /translation="MQSFTDTPDFQLTTKNTPSVVMTSDLRKVYRTGFWMNQKVVSLKG FT CSLTVYQGETFGLLGPNGAGKTTLLKLLLGIIRPSGGKGLLLGQPLGD" XX SQ Sequence 4142 BP; 1133 A; 909 C; 858 G; 1242 T; 0 other; gatcgctttt tgatattgtg taactacttg tcccagtcgg ctttgggtgc gctggtattg 60 tgcttgggtt tgcgctaaat cttgctgtgc ttttaatttt tcttttttgg cttggtcgcg 120 ctgagtttct acctgttttt tatctgttct ggtggtttct agctcttgat taactttatt 180 acgttcaatt tccacctgag ttttttgctc ttctgcgact ttgagctgtt ctcgtttttg 240 cctgaggtct ttttgaatat cttctaactc gaaaacccct ttacgtagtc cttcgtcagc 300 aatgaataag attgccaagg tagttgctga aactagtcct cctgtcaaaa ttgtcaccag 360 tacagccgtg tttttggggc gtagattaaa cagagagagg cgtgctttgc caactcttgt 420 gccgatgcga tcgccaacag tggcaattac acctcccaaa attaaaattg ctgctatgag 480 gatgtaccca gtggtcatct tcagctaccc aattgagtcc agatacagcc tactactttc 540 aatcattctt tgtggaggat gggagggtgg gaatagctga agttactcaa gattttcgat 600 ttacttctaa ctatgggtgt cattgagaaa aatataacac gtaccacctc tgatggttcc 660 aattgtttaa agagtgcaga aggcaagagc cagaatttca gtatgggttc accgtcactt 720 tgagttaaat aaacggattg aagaaaccaa ctaaatctat aatgagtagg atttagcctg 780 tgctaatagt tagccacatt ctgaattctg actcctgcta ttcttcttta agtgaactgt 840 ctgctgagag tcacaggttt atgcacagta atcttctttt tgtggatgga aatcatcttt 900 ttctcccgca aatcccctag tagcctagta acagtaacgc gagtagagcc aattgcttcg 960 gcgatcgcct gatgagataa ctttaaatca attgtgattc catctgcaca aggaacacca 1020 aaatcacgac agagaattaa cagaaaactc accaatctcg aacccatatc tcggtgcgct 1080 aaggtttcaa tcatcatctc tgtttgtaga atccgcgaag acagaccccg cagcatcaac 1140 atcgataatt caggattttc cttcagtgct tgctccactt gttcaattgg tgcagaaagc 1200 aattctactg gagtaaatgc caccgcatgg taaaacctat ccgacttgtt tcctgtcaac 1260 aaagacagga caccaaaaac gctattttcc cgtagtagtg ctactgtaat ctcttctcct 1320 gcctcgtaca ccctggaaag tttcacagcc cctttcaaaa gaaagtagac tcgttcggca 1380 ggatcgccag gaaaaaagat cgttttattg cgttcaaacg tttcgacaac aggaggaaaa 1440 gctccggttg ccatctgacg aaaaacattt gctagggcct tatcttgtgt cacgatcatc 1500 tcccttcccc tacccaatgc cggaataaca aaaaactaaa aactaattac ctaagaatac 1560 acctgaaaaa tcaataaagc accgttaacc tttctgtact ttcctatact caaacgtaca 1620 actttatggt tatttgttca taatgatacc caacttttgc tatttttagc tagcagttct 1680 tgatagatac ttctactttc tctaaccatc aggttttttg cagaaaaaat taagtaatct 1740 tgaaaatatc ttaagaaata acaaacattt tattctaaaa aacgccctta ataatcatca 1800 tttttgctaa ccatgtataa aacaaagata aagggtttgg ataagggtgt aggggtatag 1860 gggtataggg gtataggggt atagattgcc taagtcctat cttggttcag gcaggctgtt 1920 cttgagtaag ggggaaaaga aaaattctga acctctttcc tccctggcct accttgcctc 1980 tcttgctctc ctcctgtccc ctagacattc tttcgagtta aacagcaaga aaattcccaa 2040 catagcttga ttacctcttc tactgggtag tgatttctgt caagctgtac aaatgaatcg 2100 atcacattaa tgacaacaaa aatctctatg ctgaatctga ctggaaaaaa tgccttggtt 2160 acaggtatcg ccaataatcg ttccattgcc tggggaattg cccaacaact gcacgcagcc 2220 ggagctaacc ttggtattac ttatctacca gatgaacgtg gcaaatttga gaagaaagtt 2280 tcagaactcg tagaacccct taaccccagc ttattcttgc cttgtaatgt tcaaaatgat 2340 gaacaaattc agtctacttt tgataccatc cgcgataaat ggggcaggtt agatattctg 2400 attcattgtc tagcctttgc taacagagat gatttgactg gagattttag ccaaacatct 2460 cgtgctggtt ttgccacggc tttagatatc agcacttttt cactggtgca gttaagtggt 2520 gcggctaaac ccctaatgac tgaaggcggt agtattatta ctttgtcata tttgggtggt 2580 gttagagctg ttcctaacta caacgttatg ggagtagcca aagccggatt agaagctagt 2640 gtacgttatc tagcatctga actcggctct caaaatattc gcgttaacgc catctctgct 2700 ggccccatcc gcaccttggc ttctagtgcc gttggtggca ttttagatat gattcatcat 2760 gtggagcaag tagccccctt acgtcggact gtgactcagc tagaagtggg caatacagcc 2820 gctttcttgg ctagtgattt agctagcggt attactggtc aagtcctgta cgtagatgca 2880 ggatacgaaa tcatggggat gtaataaaat ctgggtactg ggtattaggg attggggatt 2940 aggtatgagg aacaaacaag gtggaaaaag aatgattttt tcaccacttt ttccttatat 3000 gcccagtccc caatccccga tccccaatcc ctaatcccta gcctctatgc aaatcagcga 3060 ttatccccaa cttaatttgt cctcagttcc tcggattgct tcagtgcatc gcatcactgg 3120 ggaaacaaat gtacaagtta ctgtcaattt ggatggtacg ggaatttgta aggcagctac 3180 tggcattccc tttttagatc atatgctgca tcaaatttcc tcccacggct tgattgattt 3240 ggatgtccaa gccaaaggag attgggaaat tgatgaccac cacacaaatg aagatgtggg 3300 tattacttta ggtcaagctt tggctaaggc attaggcgac agaaaaggta tagtccgctt 3360 tggtaatttc ctagcacctt tagacgaagc tttagtacag gtagcattgg atttttctgg 3420 tcgtcctcac ctcagctatg gcttacaaat tcctacggaa cgtgtgggaa cttatgacac 3480 ccaattagtt agagaatttt ttgtggcatt agtcaaccat agccaaatga ctctgcacat 3540 tcgccaatta gatggcatta attcccatca cattattgag gcgaccttca aagcctttgc 3600 cagagcagcc agaatggcta tagaagtcga tcctcgccgc gctgggacga ttcctagctc 3660 taagggggtt ttgtaaacag cagggggcag ggagcagggg cagggagcag aaatccccaa 3720 tccccagtca ccagtcccca atccccagtc cccaatcccc aaaattcgca acaattaaca 3780 aaccagtagc gatcgcgctg atcttcttgg gtactttata accaatgctg cgtaatcact 3840 agtatttgtt aattaacacc caatgcagtc ttttacagac accccggatt ttcaattaac 3900 taccaaaaat accccgtcgg tagtgatgac ttctgatttg cgaaaagttt atcgcaccgg 3960 cttttggatg aatcaaaaag ttgtttccct caagggctgt tctttaacgg tttaccaggg 4020 ggaaactttt ggtttactgg ggccgaatgg tgcaggtaaa actactttgt taaagctatt 4080 gttgggaatt atccgtccaa gcggtggaaa agggttattg ttgggtcagc cattaggcga 4140 tc 4142 // |
|