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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   L08236; SV 1; linear; genomic DNA; STD; PRO; 1157 BP.
XX
AC   L08236;
XX
DT   10-OCT-1993 (Rel. 37, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 5)
XX
DE   Bacillus subtilis 23S ribosomal RNA (23S rRNA) gene, 3' end; 5S ribosomal
DE   RNA (5S rRNA) gene, complete; transfer RNA-Met (tRNA-Met) gene, complete;
DE   and transfer RNA-Asp (tRNA-Asp) gene, complete sequence.
XX
KW   23S ribosomal RNA; 5S ribosomal RNA; transfer RNA-Asp; transfer RNA-Met.
XX
OS   Bacillus subtilis
OC   Bacteria; Firmicutes; Bacillales; Bacillaceae; Bacillus.
XX
RN   [1]
RP   1-1157
RX   PUBMED; 8419296.
RA   Rudner R., Chevrestt A., Bucholz S.R., Studamire B., White A.M.,
RA   Jarvis E.D.;
RT   "Two tRNA gene clusters associated with rRNA operons rrnD and rrnE in
RT   Bacillus subtilis";
RL   J. Bacteriol. 175(2):503-509(1993).
XX
DR   RFAM; RF00005; tRNA.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1157
FT                   /organism="Bacillus subtilis"
FT                   /strain="168T"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:1423"
FT   rRNA            <1..78
FT                   /gene="23S rRNA"
FT                   /product="23S ribosomal RNA"
FT   gene            1..78
FT                   /gene="23S rRNA"
FT   rRNA            134..250
FT                   /gene="5S rRNA"
FT                   /product="5S ribosomal RNA"
FT   gene            134..250
FT                   /gene="5S rRNA"
FT   tRNA            265..341
FT                   /gene="tRNA-Met"
FT                   /product="tRNA-Met"
FT                   /note="codon recognized: ACC"
FT   gene            265..341
FT                   /gene="tRNA-Met"
FT   tRNA            402..478
FT                   /gene="tRNA-Asp"
FT                   /product="tRNA-Asp"
FT                   /note="codon recognized: AAC"
FT   gene            402..478
FT                   /gene="tRNA-Asp"
FT   terminator      486..510
FT   RBS             490..496
FT   CDS             499..1038
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /label=ORF
FT                   /db_xref="GOA:O05514"
FT                   /db_xref="InterPro:IPR006283"
FT                   /db_xref="UniProtKB/Swiss-Prot:O05514"
FT                   /protein_id="AAA72334.1"
FT                   /translation="MFSFFLCFLLLYLLLGVIAKLSLYREHLGYPAKFDKLGRAQIGIS
FT                   RVERRFWFMDEFDLIHSITPRTIHHSSVDVGIGDDAALYTAKHGVQEIVCVDTMVEDVH
FT                   FKLHYSSPEDIGYKALAVNISDIAAMGGIPKFYLVSLAVPSKWTESEIKAMYEGMNELA
FT                   KLYHMDLIGGVYSFYR"
XX
SQ   Sequence 1157 BP; 310 A; 230 C; 290 G; 327 T; 0 other;
     tgatcaggtt gataggtctg aggtgaagtg tggcgacaca tggagctgac agatactaat        60
     cgatcgagga cttaaccata tttttgaatg atgtcacatc tgttatctag ttttgagaga       120
     acactctcaa tttgtttggt ggcgatagcg aagaggtcac acccgttccc ataccgaaca       180
     cggaagttaa gctcttcagc gccgatggta gtcgggggtt tccccctgtg agagtaggac       240
     gccgccaagc aatactttta tcatcgcggg gtggagcagt tcggtagctc gtcgggctca       300
     taacccgaag gtcgcaggtt caaatcctgc ccccgcaacc aaatatatgg ttaaataagg       360
     agtgccctaa gggtgcaacc aaaataatcc tatacaaata tggtccggta gttcagttgg       420
     ttagaatgcc tgcctgtcac gcaggaggtc gcgggttcga gtcccgtccg gaccgccatt       480
     aatgtaaacg aaacgatcat gttttcgttt tttttgtgtt ttcttttact gtatcttctg       540
     cttggtgtca tagccaagct ttctttatat cgggaacatc ttggatatcc agcaaaattc       600
     gataaactag gaagagcaca aataggcata agcagggttg aaaggaggtt ttggttcatg       660
     gatgaatttg atttgataca tagcattact ccgcggacca ttcaccattc ttccgttgat       720
     gtaggaatag gtgatgatgc agcgctctac actgcgaaac acggcgttca ggaaattgtt       780
     tgtgttgata ctatggtaga agacgtgcac ttcaaattac actattcctc acctgaagat       840
     atcgggtaca aggcgttagc cgttaatata agtgatattg ccgcgatggg aggcattcct       900
     aagttttatc tggtatcact tgcggtacct tcaaaatgga ctgaatctga aatcaaggcg       960
     atgtatgaag gaatgaatga actggcgaaa ctatatcata tggatctgat tggcggcgta      1020
     tacagtttct accgctgaca aattagtcgt tacagtcact gtaatcggtg aaattgaaaa      1080
     gggacaggcc tgtttgcgca gcttggcaaa accgaatgat attgtgtttg taaccggtga      1140
     aatcggttct tctgcag                                                     1157
//
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