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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   L07290; SV 1; linear; genomic DNA; STD; PRO; 1953 BP.
XX
AC   L07290;
XX
DT   03-DEC-1992 (Rel. 34, Created)
DT   17-APR-2005 (Rel. 83, Last updated, Version 6)
XX
DE   Porphyromonas (Bacteroides) gingivalis NAD-dependent glutamate
DE   dehydrogenase (gdh) gene, complete cds.
XX
KW   cell surface antigen; NAD-dependent glutamate dehydrogenaseNAD*glu*deh;
KW   recombinant antigen.
XX
OS   Porphyromonas gingivalis
OC   Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae;
OC   Porphyromonas.
XX
RN   [1]
RP   1-1953
RX   DOI; 10.1016/0003-9969(90)90132-T
RX   PUBMED; 2088236.
RA   McBride B.C., Joe A., Singh U.;
RT   "Cloning of Bacteroides gingivalis surface antigens involved in adherence";
RL   Arch. Oral Biol. 35:59S-68S(1990).
XX
RN   [2]
RP   1-1953
RX   PUBMED; 8392971.
RA   Joe A., Yamamoto A., McBride B.C.;
RT   "Characterization of recombinant and native forms of a cell surface antigen
RT   of Porphyromonas (Bacteroides) gingivalis";
RL   Infect. Immun. 61(8):3294-3303(1993).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1953
FT                   /organism="Porphyromonas gingivalis"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:837"
FT   -35_signal      160..165
FT                   /gene="gdh"
FT   -10_signal      179..184
FT                   /gene="gdh"
FT   RBS             215..219
FT                   /gene="gdh"
FT   CDS             226..1563
FT                   /codon_start=1
FT                   /transl_table=11
FT                   /gene="gdh"
FT                   /standard_name="PgAg1"
FT                   /product="NAD-dependent glutamate dehydrogenase"
FT                   /note="putative"
FT                   /db_xref="GOA:B2RKJ1"
FT                   /db_xref="InterPro:IPR006095"
FT                   /db_xref="InterPro:IPR006096"
FT                   /db_xref="InterPro:IPR006097"
FT                   /db_xref="InterPro:IPR014362"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/Swiss-Prot:B2RKJ1"
FT                   /protein_id="AAA50985.1"
FT                   /translation="MKTQEIMTMLEAKHPGESEFLQAVKEVLLSVEEVYNQHPEFEKNG
FT                   IIERIVEPDRVFTFRVPWVDDQGKVQVNIGYRVQFNNAIGPYKGGIRFHPSVNLSILKF
FT                   LGFEQMFKNALTTLPMGGGKGGADFSPKGKSEAEIMRFCQSFMTELWRNIGPDTDIPAG
FT                   DIGVGGREVGYMFGMYKKLAREHTGTLTGKGFEFGGSRLRPESTGFGAVYFVQNMCKQN
FT                   GVDYKGKTLAISGFGNVAWGVAQKATELGIKVVTIYGPDGYVYDPDGINTPEKFRCMLD
FT                   LRDSGNDVVSDYVKRFPNAQFFPGKKPWEQKVDFAMPCATQNEMNLEDAKTLHKNGVTL
FT                   VAETSNMGCTAEASEYYVANKMLFAPGKAVNAGGVSCSGLEMTQNAMHLVWTNEEVDKW
FT                   LHQIMQDIHEQCVTYGKDGNYIDYVKGANIAGFMKVAKAMVAQGVC"
XX
SQ   Sequence 1953 BP; 526 A; 456 C; 472 G; 499 T; 0 other;
     aagctcgatg catgctgcct ttgaatcaag tcaatatact taatcttttg gcgacgtatt        60
     cggatactga tttatgtact gaaaaagctg atattcggaa gggttagttt gtgatttgga       120
     ctacaaggat cttactaaac tttatttttg agaaaaggct tgaaagttcc aaacacatta       180
     gctacttttg ccggagtaat ctcttactat tatttagagt tctctatgaa gacccaagaa       240
     attatgacaa tgctggaggc taagcacccc ggcgaaagcg aattcctcca agcagtgaag       300
     gaagttcttc tctctgtaga agaagtgtac aaccaacatc ccgagttcga aaagaacggt       360
     atcatcgagc gtatcgtaga gccggatcgt gtattcacat tccgtgtacc ctgggtagat       420
     gaccaaggta aggtacaggt aaacatcggc taccgcgttc agttcaacaa tgccatcggt       480
     ccgtacaagg gcggtatccg tttccatcct tcagtgaacc tctctatcct gaagttcctc       540
     ggtttcgaac agatgttcaa gaatgcactc actactctcc ccatgggtgg tggtaaaggt       600
     ggtgccgact tctctcccaa gggtaagagc gaagccgaaa tcatgcgttt ctgccagagc       660
     ttcatgaccg aattgtggcg caacatcggc cctgacaccg acattcctgc cggtgacatc       720
     ggcgtaggcg gtcgcgaagt aggttatatg ttcggtatgt acaagaagct cgctcgcgag       780
     cacacaggta cgcttaccgg caagggattc gagttcggcg gttctcgtct gcgtcccgaa       840
     tctaccggtt tcggtgctgt ttacttcgta cagaacatgt gtaagcaaaa cggtgtagac       900
     tacaagggca aaactcttgc tatctccgga ttcggtaacg ttgcttgggg tgtggctcag       960
     aaagctaccg agttgggcat taaggttgtt acgatctacg gtcctgacgg ctatgtttac      1020
     gaccccgacg gtatcaacac accggagaaa ttccgatgca tgcttgacct ccgtgacagc      1080
     ggtaacgacg tagtatcaga ctatgtgaag agattcccca atgctcagtt cttccccggc      1140
     aagaagcctt gggagcaaaa ggtagacttc gctatgcctt gcgctacgca gaacgagatg      1200
     aacctcgaag atgccaagac gttgcacaag aatggtgtta ctcttgtagc tgaaacttct      1260
     aacatgggtt gtacggccga agccagcgaa tactatgtag caaacaagat gctcttcgct      1320
     ccgggtaagg ctgttaatgc aggtggtgtt tcttgctcag gtctcgaaat gacgcagaac      1380
     gctatgcacc tcgtttggac gaatgaagaa gtggacaagt ggctgcacca gatcatgcaa      1440
     gacatccacg agcagtgcgt tacatacggt aaagacggca actacatcga ctatgtgaag      1500
     ggtgccaata tcgccggctt catgaaggtt gccaaggcta tggtagctca gggcgtttgc      1560
     taatccctga tttcactccc ctgctcatac agagcagata caaaaacgaa aaagcagaga      1620
     cgtatctccc ctccggaggt acgtctcttt ttatttccac aaacgctact gcgtgactct      1680
     atagctgctt tttattcaaa atttatatcc tacctcctcg attgtcgtta catttggaga      1740
     gattcattct aaattcaata gtaataatat gaagaagaga aaacagctat cgctggcgtt      1800
     ggcatggtcg cttgctttgc ttccggtggg aggatacacg gcatttgccc aagtaaacac      1860
     gacagctcaa acggtgaaac ctcaaaatat aaacccgatg caaaaacgta tgtcctcctt      1920
     tcggcaggaa atgctcagtg aactgacaga tcc                                   1953
//
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