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EBIDatabasesDatabase BrowsingDbfetch

EBI Dbfetch

ID   L00948; SV 1; linear; genomic DNA; STD; INV; 1996 BP.
XX
AC   L00948;
XX
DT   07-FEB-1993 (Rel. 34, Created)
DT   04-MAR-2000 (Rel. 63, Last updated, Version 3)
XX
DE   Popillia japonica retrotransposable element R2 reverse transcriptase gene,
DE   3' end.
XX
KW   retrotransposable element R2; reverse transcriptase.
XX
OS   Popillia japonica (Japanese beetle)
OC   Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera;
OC   Endopterygota; Coleoptera; Polyphaga; Scarabaeiformia; Scarabaeidae;
OC   Rutelinae; Popillia.
XX
RN   [1]
RP   1-1996
RX   PUBMED; 8383793.
RA   Burke W.D., Eickbush D.G., Xiong Y., Jakubczak J.L., Eickbush T.H.;
RT   "Sequence relationship of retrotransposable elements R1 and R2 within and
RT   between divergent insect species";
RL   Mol. Biol. Evol. 10(1):163-185(1993).
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1996
FT                   /organism="Popillia japonica"
FT                   /mol_type="genomic DNA"
FT                   /tissue_lib="Charon 35 (from W. Burke)"
FT                   /db_xref="taxon:7064"
FT   CDS             <3..1823
FT                   /codon_start=1
FT                   /product="reverse transcriptase"
FT                   /db_xref="GOA:Q05118"
FT                   /db_xref="InterPro:IPR000477"
FT                   /db_xref="InterPro:IPR015706"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q05118"
FT                   /protein_id="AAA29786.1"
FT                   /translation="GTLANIIMLEHYIKLRRLKGKTYNVVSLDIRKAFDTVSHPAILRA
FT                   MRAFGIDDGMQDFIMSTITDAYTNIVVGGRTTNKIYIRNGVKQGDPLSPVLFNIVLDEL
FT                   VTRLNDEQPGASMTPACKIASLAFADDLLLLEDRDIDVPNSLATTCAYFRTRGMTLNPE
FT                   KCASISAATVSGRSVPRSKPSFTIDGRYIKPLGGINTFKYLGLTFSSTGVAKPTVYNLT
FT                   RWLRNLEKAPLKPNQKFYILKTHLLPRLFYGLQSPGVTAGILQECDRLARRTTRKIFHL
FT                   NVHTGSQFLHARIRDGGLGLVQMRYRIPCILSKRLGSLKQGNDTTNWSDIFNIEGPARS
FT                   FYFRIRFLSSKGDPDPYWREEIRTRPLSSGLQDAADDASSRSWLNTIPRGWTGRDFVRA
FT                   VQLRTGNLATQGLPYMAPEHRGCRNGCPRTESLSHVLQGCPLTHHERIKRHNELVAKVA
FT                   KHARKKGWTTEVEPYVYHQDGQLYKPDLAIHQPDNTLVICDVQVCWEGPRPLATSWDNK
FT                   RLVYDNPRFREAAVRRWGDKSLVFSPLLLGARGIWPRANVPTCNILSIPTTLRASCVHT
FT                   CLKWGSTIHRHFMAGVWRRRPPDPPRPVPP"
FT   3'UTR           1824..1996
XX
SQ   Sequence 1996 BP; 534 A; 563 C; 488 G; 411 T; 0 other;
     acggtaccct cgccaatatc atcatgctgg aacattatat caagctacga aggctgaaag        60
     ggaagaccta caacgtagtt tcccttgaca tccgaaaagc cttcgatacg gtatcgcacc       120
     ccgccatcct ccgcgcgatg cgcgcgtttg ggatagacga tggaatgcag gatttcatca       180
     tgagtaccat cacagacgcc tacactaaca tcgtggtggg cggaagaaca acgaacaaga       240
     tatatattag gaatggtgta aagcaagggg accccctaag cccagtccta ttcaacatcg       300
     ttttggacga actggtaacg agactcaacg acgagcaacc cggagccagt atgactcccg       360
     cctgcaaaat agcatcctta gccttcgcag atgacctgct gcttttggaa gacagggaca       420
     ttgacgttcc caactctctg gccactacct gcgcctactt caggaccaga gggatgaccc       480
     tgaacccaga aaagtgcgca tccatcagcg cagccaccgt ctctgggagg agcgtcccac       540
     gatcaaaacc gtccttcacc atcgatggac ggtacatcaa gccccttgga gggataaata       600
     ctttcaagta tctgggactt acctttagca gcaccggcgt agcaaaacca acggtctaca       660
     atctaacccg atggctgagg aatctggaaa aagcaccatt aaaaccaaac cagaaattct       720
     atatcttgaa aactcacctg cttccacgcc ttttctacgg cctgcagtct ccgggggtga       780
     cggctggaat cctccaggag tgcgatagac tcgcccggcg aacgacccgt aagattttcc       840
     atctaaatgt acatacgggg tcgcaatttc tccacgccag gatccgtgat ggtggcctgg       900
     gcctagtcca aatgaggtat cggataccat gcatcctctc caaacgtctg ggaagcctga       960
     agcaaggaaa cgacactacc aactggtcgg atatttttaa catcgagggt ccggcacgat      1020
     ctttctactt ccggatcagg tttctatcgt ccaaagggga tcccgaccca tattggagag      1080
     aagagatacg aacgcgcccc ctcagttccg ggttgcagga cgctgcagac gacgcctcca      1140
     gtaggagctg gctgaacacg atcccgagag gctggaccgg acgggatttc gtacgagcgg      1200
     tccaactacg aacgggcaac cttgccacac aaggactccc ctacatggcc ccagaacatc      1260
     gaggatgccg aaatgggtgc ccccggacgg aatcactgtc gcacgtcctt caggggtgcc      1320
     cattaaccca ccatgagcgg attaagcgac ataacgagct agtcgccaaa gtggccaagc      1380
     atgcgaggaa gaagggatgg acgacagagg tcgaacctta tgtataccat caagacgggc      1440
     aactgtacaa acctgacctg gcaatccacc agccagacaa caccctggta atatgcgatg      1500
     tccaggtgtg ttgggaagga ccacgccccc ttgcaaccag ttgggataac aagaggctgg      1560
     tctatgacaa cccgaggttc agggaagcag ctgtccgtcg atggggagac aagtccctgg      1620
     ttttctcccc actgctcctg ggagcaagag gtatatggcc aagagcaaat gtcccgacat      1680
     gtaacatctt gtccatcccg acgaccctgc gtgcaagctg tgtccacaca tgccttaaat      1740
     ggggatccac gatccaccgc cactttatgg cgggagtttg gcgccgccgt ccaccggatc      1800
     cacctcgtcc cgttccaccg tgacgtcgcc tggggcgctt tctccaacag catttcggcg      1860
     gcactaacat ccagagtccg aagaatctgc attaaacaat ctttattttt gttgtaaacc      1920
     tacgggtggg taccacctac aacccgaaat gtgttatata tatatatact atgtattata      1980
     tcaataaaca tttaaa                                                      1996
//
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