 |
|
EBI DbfetchID L00947; SV 1; linear; genomic DNA; STD; INV; 2687 BP. XX AC L00947; XX DT 07-SEP-1992 (Rel. 33, Created) DT 04-MAR-2000 (Rel. 63, Last updated, Version 3) XX DE Popillia japonica retrotransposable element R2 reverse transcriptase gene, DE 3' end. XX KW retrotransposable element R2; reverse transcriptase. XX OS Popillia japonica (Japanese beetle) OC Eukaryota; Metazoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; OC Endopterygota; Coleoptera; Polyphaga; Scarabaeiformia; Scarabaeidae; OC Rutelinae; Popillia. XX RN [1] RP 1-2687 RX PUBMED; 8383793. RA Burke W.D., Eickbush D.G., Xiong Y., Jakubczak J.L., Eickbush T.H.; RT "Sequence relationship of retrotransposable elements R1 and R2 within and RT between divergent insect species"; RL Mol. Biol. Evol. 10(1):163-185(1993). XX FH Key Location/Qualifiers FH FT source 1..2687 FT /organism="Popillia japonica" FT /mol_type="genomic DNA" FT /tissue_lib="Charon 35 (from W. Burke)" FT /db_xref="taxon:7064" FT CDS <1..2136 FT /codon_start=1 FT /product="reverse transcriptase" FT /db_xref="GOA:Q03274" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR015706" FT /db_xref="UniProtKB/Swiss-Prot:Q03274" FT /protein_id="AAA29785.1" FT /translation="HTYRPIAREEIQCAIKGWKPSAPGSDGLTVQAITRTRLPRNFVQL FT HLLRGHVPTPWTAMRTTLIPKDGDLENPSNWRPITIASALQRLLHRILAKRLEAAVELH FT PAQKGYARIDGTLVNSLLLDTYISSRREQRKTYNVVSLDVRKAFDTVSHSSICRALQRL FT GIDEGTSNYITGSLSDSTTTIRVGPGSQTRKICIRRGVKQGDPLSPFLFNAVLDELLCS FT LQSTPGIGGTIGEEKIPVLAFADDLLLLEDNDVLLPTTLATVANFFRLRGMSLNAKKSV FT SISVAASGGVCIPRTKPFLRVDNVLLPVTDRMQTFRYLGHFFGLSGAAKPTVYNLSRWL FT KCVEAAPLKPEQKLSLIREHVVPKLLYGLQNPSVTARTLRDADKLIRTTVKRCLHLHLH FT TPNQCFYARVRDGGLGLTDLRRSIPRIMLDRINARRSSDPMAVALFSCPSFDHLRGRLV FT ALAGDVPPSHFWREAIANHTTTKGLEAASDDPASRSWIFRKPYGWSGKDFVRAIHLRTG FT NLPTKAIPSNPAGERLCRGGCGKQATISHVLQRCPVVQPERIRRHNEIARKIAAHCRSK FT GWTVEEEPHIRHPLGHLYKPDIVIHREGLPSVVCDVQVSWDGYEPLDEAWRNKQRTYDH FT DLFRTAAGRRWPGKTFLHLPAILGARGIWPRCNSETASALAFTNQLKASWLHSCLKWDS FT TLHTSFMRAVWSRQAGA" FT 3'UTR 2137..2687 XX SQ Sequence 2687 BP; 553 A; 835 C; 662 G; 637 T; 0 other; cacacctacc gcccgatcgc gcgcgaagag atacagtgcg cgataaaggg ctggaaacct 60 tctgccccgg ggtctgacgg gctcaccgtc caggccataa ctaggactcg cctccctcga 120 aattttgttc aactgcatct tctacgtggc catgttccca caccctggac cgccatgcgg 180 acaaccctca tccctaagga tggggacctc gagaatccaa gcaattggag gcccataacc 240 atcgcttcgg ccctccagcg tctgcttcac aggatccttg ctaaacgact tgaggcggcc 300 gttgaacttc accccgccca gaaaggatac gctcggatag acggaaccct cgtcaatagc 360 ctacttctcg atacatacat atccagcagg agggagcagc ggaagacgta caatgtggtg 420 tcgctggatg ttcgaaaagc tttcgacacg gtgtctcatt cttccatctg tcgtgcgctc 480 caacgtttgg ggatcgacga aggcacgagc aactacatca ccggttccct ctccgactcc 540 accaccacca tcagggtcgg accgggtagc caaacccgga agatctgcat taggcgcggg 600 gttaagcagg gcgatccatt gagccccttt ttgttcaacg ccgttctcga cgagctactt 660 tgctctctgc agtccactcc agggatcggt ggaaccatag gggaggagaa gataccggtc 720 ttagcatttg cggatgacct cctcctctta gaagacaacg acgtcctcct acctaccacc 780 ttggccacgg tggcaaattt cttccggctc cgcggaatgt cccttaacgc gaagaaatcg 840 gtctctattt cggtcgctgc ttctggcggg gtgtgtattc cccgcacgaa gccttttctc 900 cgagtggaca atgttctgct tccggtgacc gaccggatgc agaccttccg ctacctggga 960 cacttcttcg ggctatctgg cgccgcgaag cccaccgtct acaacctttc gcggtggctg 1020 aagtgcgtgg aggcggctcc tctgaaaccg gagcagaaac tctccctgat ccgagaacac 1080 gtcgtgccta aactgctgta cgggctccaa aatccgtccg ttaccgcgcg cacattacgg 1140 gatgccgata aactcattcg caccaccgtt aaacggtgcc tccatctgca cctgcacacg 1200 cccaaccagt gcttctatgc gcgtgttcgc gacggcggtc tcggtctcac ggacttgcgt 1260 cggtccatac cgcgaatcat gttggatcgt atcaacgctc gacgctccag cgaccccatg 1320 gctgtagccc tattctcctg cccctctttt gaccatctcc gaggacggct ggttgccctc 1380 gcaggagatg tcccacctag ccatttttgg agggaggcta tagccaatca caccaccacc 1440 aaaggcctgg aggcagcatc cgacgatccc gcgagccggt cttggatctt ccggaagccc 1500 tatgggtggt cggggaagga cttcgttcgc gccatccatc tgcgcaccgg aaacctcccc 1560 accaaggcca ttccatcgaa tcccgccggg gagcgtttgt gtaggggcgg ctgcggtaag 1620 caggcaacca tatcgcacgt cctgcagcga tgccccgtgg tgcagcccga gagaatacgc 1680 cgccacaacg agatagcgcg caagattgcg gctcactgcc gttccaaggg ctggactgtc 1740 gaggaagaac cccatattag acatcccttg ggtcacctct acaaacctga tatagttatc 1800 caccgcgaag ggcttccctc cgtggtttgc gacgttcagg tctcttggga cggctacgaa 1860 cccctggatg aggcttggag aaacaagcag aggacttacg accacgacct tttcaggacc 1920 gcagcaggca ggagatggcc cgggaaaacc tttctacacc ttccggccat acttggcgcc 1980 agggggattt ggcctcgctg taactcagag accgcctccg ccctggcctt tactaaccaa 2040 ctgaaagcca gctggctaca ctcctgcttg aagtgggact ccacgcttca taccagcttt 2100 atgagggccg tgtggtcgcg ccaagccggc gcctaacctg gctgggccgt ctatgggatt 2160 tgcaccttcc ttttcctcgg atgcctcctc ccctttttcg ccgcaccgtc gccatctctc 2220 atagctgttc tctttttatt tttatcctgt tcttatgacg tatttctcgt agtttgtcct 2280 gatatttcat gtgctccgtc atttacccat atgtccgttt tatctataca acacgatcct 2340 actttgcctc tcgctcattg tgttgtgatg ctgttgcttc tgttttatgc acacagatgt 2400 gagcaaccgg accaaccctc cacacgagga tttcaaccta ggcgccgttc cgctgtaccg 2460 aaacgacgac gccgcgcctg acgcagctct tttgcacact gttggaggtc ccgccgtgcc 2520 gccacctgta cgctcaacgc cctacccagc acctacgact tcaggtggcg aagactacat 2580 tttattttat tcgcttttta tagactctta ttgtgttttt tatatatgca cgaacgccaa 2640 tgtgtacaat cgtttgtttc tgattatttg ataaataaag ttttaaa 2687 // |
|