EBI Dbfetch

ID   FM178380; SV 1; circular; genomic DNA; STD; PRO; 1206461 BP.
XX
AC   FM178380;
XX
PR   Project:30703;
XX
DT   01-OCT-2008 (Rel. 97, Created)
DT   13-MAY-2009 (Rel. 100, Last updated, Version 5)
XX
DE   Aliivibrio salmonicida LFI1238 chromosome 2 complete genome
XX
KW   complete genome.
XX
OS   Aliivibrio salmonicida LFI1238
OC   Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC   Aliivibrio.
XX
RN   [1]
RP   1-1206461
RA   Hjerde E.;
RT   ;
RL   Submitted (26-JUN-2008) to the EMBL/GenBank/DDBJ databases.
RL   Hjerde E., Department of Molecular Biotechnology, University of Tromso,
RL   Breivika, 9037 Tromso, NORWAY.
XX
RN   [2]
RX   DOI; 10.1186/1471-2164-9-616
RX   PUBMED; 19099551.
RA   Hjerde E., Lorentzen M.S., Holden M.T., Seeger K., Paulsen S., Bason N.,
RA   Churcher C., Harris D., Norbertczak H., Quail M.A., Sanders S.,
RA   Thurston S., Parkhill J., Willassen N.P., Thomson N.R.;
RT   "The genome sequence of the fish pathogen Aliivibrio salmonicida strain
RT   LFI1238 shows extensive evidence of gene decay";
RL   BMC Genomics 9:616-616(2008).
XX
DR   GR; FM178380_GR.
DR   SILVA-LSU; FM178380.
DR   SILVA-SSU; FM178380.
DR   Sample; ERS000076.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1206461
FT                   /organism="Aliivibrio salmonicida LFI1238"
FT                   /chromosome="2"
FT                   /strain="LFI1238"
FT                   /mol_type="genomic DNA"
FT                   /country="Norway:Hammerfest"
FT                   /isolation_source="Atlantic cod"
FT                   /db_xref="taxon:316275"
FT   CDS             1084..3069
FT                   /transl_table=11
FT                   /gene="rctB"
FT                   /locus_tag="VSAL_II0001"
FT                   /old_locus_tag="TVS3434"
FT                   /product="oriCII binding protein RctB"
FT                   /note="Similar to Vibrio harveyi RctB UniProt:Q6W6R5 (662
FT                   aa) fasta scores: E()=6e-178, 69.970% id in 656 aa"
FT                   /db_xref="UniProtKB/TrEMBL:B6EPZ4"
FT                   /inference="similar to sequence:UniProt:Q6W6R5"
FT                   /protein_id="CAQ80755.1"
FT                   /translation="MNHIKTSEKEKIYIPLPRDHKGGHLFEIPANLVDWITQYQHFKGV
FT                   TKSILELMNLISLKGFSSPDGLVSTTEIIQTTDGHLTRAAIQQRLRTAVSIGLFEQSPV
FT                   RFEVGLAGKTMLHRFINPSQLISILGITSLRSEQSQEQEKQKRSKALAQTQVNRQFLTE
FT                   HGLGVPPSMRDEADQFVVSPTNWAGIIDQALAPPRTRKNYQKAMVAISGTKAIIETRSS
FT                   KNIMTVDDLMTLFALFTLTVQYHDHHQDDYHIQTKTMGNKTPIYITDILTLRGKKDSGP
FT                   ARDSIRESIDRIEFTDFQLHELTGRWLSENMPKGFKSDRFRFLARTITASDEAPKEGKD
FT                   GEIKIKPNLYILVWEPSFYDELLTKDYFFLFPPEILKQHTLVFQLYSFFRSRLARRMTD
FT                   NLLLSEINQKLARNVDWRRFSLDLIRELKKLAKDKVTDELFIVNLWGYHLTITMLDPSD
FT                   KLPDYQVDIRCDPEEVIRFSRARTTNAGKRNMAPTMPNPLRNEIMPKQALDQLSTIIDG
FT                   EFEPIKRNTPNKSGRLGRRVKLRKHSAEINADELTITLTKYTSEEALERSITALSAMTG
FT                   HSAASISEECKELQEKLDYIKVSGEILPYETLSKTIEFYNKQDHGRHLSIENLIAGLAV
FT                   RRKICKLVFSQNYDQDVLRALDEMVG"
FT   CDS             3426..3773
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0002"
FT                   /old_locus_tag="TVS3435"
FT                   /product="putative endoribonuclease L-PSP"
FT                   /db_xref="InterPro:IPR019897"
FT                   /db_xref="UniProtKB/TrEMBL:B6EPZ5"
FT                   /protein_id="CAQ80756.1"
FT                   /translation="MIERQETKQRMSRIVKHNGTIYLCGQVCADATQGIAEQTQTMLDK
FT                   VDLLLTQAGSSREHMLSATIYIKNMADFAKMNAVWDAWVPEGYAPARACVEASMARDAL
FT                   LVEISVVAAEK"
FT   misc_feature    3444..3767
FT                   /locus_tag="VSAL_II0002"
FT                   /note="HMMPfam hit to PF01042, Endoribonuclease L-PSP,score
FT                   1.3e-23"
FT                   /inference="protein motif:HMMPfam:PF01042"
FT   misc_feature    3693..3749
FT                   /locus_tag="VSAL_II0002"
FT                   /note="PS01094 Uncharacterized protein family UPF0076
FT                   signature."
FT                   /inference="protein motif:ProSite:PS01094"
FT   CDS             join(3831..3974,3973..5139)
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="pip"
FT                   /locus_tag="VSAL_II0003"
FT                   /old_locus_tag="TVS3436"
FT                   /product="proline iminopeptidase (pseudogene)"
FT                   /EC_number="3.4.11.5"
FT                   /note="Similar to Aeromonas sobria Proline iminopeptidase
FT                   UniProt:P46547 (424 aa) fasta scores: E()=4.6e-97, 55.140%
FT                   id in 428 aa. CDS contains a frameshift after codon 48. The
FT                   sequence has been checked and is believed to be correct"
FT                   /db_xref="PSEUDO:CAQ80757.1"
FT                   /inference="similar to sequence:UniProt:P46547"
FT   misc_feature    4084..5130
FT                   /gene="pip"
FT                   /locus_tag="VSAL_II0003"
FT                   /note="HMMPfam hit to PF00561, alpha/beta hydrolase
FT                   fold,score 3.7e-10"
FT                   /inference="protein motif:HMMPfam:PF00561"
FT   CDS             join(5353..6156,6160..6816)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0004"
FT                   /old_locus_tag="TVS3438"
FT                   /product="hypothetical protein (pseudogene)"
FT                   /note="Similar to Vibrio fischeri Hypothetical protein
FT                   UniProt:Q5E1M3 (513 aa) fasta scores: E()=2.7e-140,70.378%
FT                   id in 503 aa. CDS contains a nonsense mutation (TGG to TGA)
FT                   after codon 268. CDS also appears to have a deletion of 16
FT                   amino acid residues after codon 22 in comparison to the
FT                   Vibrio fischeri orthologue. The sequence has been checked
FT                   and is believed to be correct"
FT                   /db_xref="PSEUDO:CAQ80758.1"
FT                   /inference="similar to sequence:UniProt:Q5E1M3"
FT   CDS             complement(6934..7287)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0005"
FT                   /old_locus_tag="TVS3440"
FT                   /product="cytochrome b561 CybB (fragment)"
FT                   /note="Similar to Escherichia coli Cytochrome b561 CybB
FT                   UniProt:P0ABE5 (176 aa) fasta scores: E()=8.9e-13, 41.026%
FT                   id in 117 aa. CDS is truncated by the insertion of the
FT                   upstream IS element and subsequent recombination events"
FT                   /db_xref="PSEUDO:CAQ80759.1"
FT                   /inference="similar to sequence:UniProt:P0ABE5"
FT   misc_feature    complement(6937..7287)
FT                   /locus_tag="VSAL_II0005"
FT                   /note="HMMPfam hit to PF01292, Cytochrome b561 family,score
FT                   3e-12"
FT                   /inference="protein motif:HMMPfam:PF01292"
FT   misc_feature    complement(order(6967..7035,7129..7188))
FT                   /locus_tag="VSAL_II0005"
FT   repeat_region   order(7297..7699,8705..10618)
FT                   /note="VSa2"
FT   repeat_region   7297..7320
FT                   /note="IR of VSa2"
FT   CDS             7378..7692
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0006"
FT                   /old_locus_tag="TVS3441"
FT                   /product="transposase"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN3"
FT                   /protein_id="CAQ80760.1"
FT                   /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA
FT                   RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS
FT                   "
FT   CDS             join(7689..7697,8705..9043)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0007"
FT                   /old_locus_tag="TVS3443"
FT                   /product="putative transposase (pseudogene)"
FT                   /note="Similar to Pseudoalteromonas haloplanktis Putative
FT                   orphan protein; putative transposase UniProt:Q3IIG1 (115
FT                   aa) fasta scores: E()=5.6e-32, 58.3% id in 115 aa. CDS is
FT                   disrupted by the insertion of an IS element"
FT                   /db_xref="PSEUDO:CAQ80761.1"
FT                   /inference="similar to sequence:UniProt:Q3IIG1"
FT   repeat_region   7700..8704
FT                   /note="VSa6"
FT   repeat_region   7700..7718
FT                   /note="IR of VSa6"
FT   CDS             7796..8677
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0008"
FT                   /old_locus_tag="TVS3442"
FT                   /product="transposase"
FT                   /db_xref="GOA:B6EH02"
FT                   /db_xref="InterPro:IPR002559"
FT                   /db_xref="UniProtKB/TrEMBL:B6EH02"
FT                   /protein_id="CAQ80762.1"
FT                   /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC
FT                   MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK
FT                   GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS
FT                   LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE
FT                   ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI
FT                   KLSECEFELILA"
FT   misc_feature    8123..8617
FT                   /locus_tag="VSAL_II0008"
FT                   /note="HMMPfam hit to PF01609, Transposase DDE domain,score
FT                   9.3e-30"
FT                   /inference="protein motif:HMMPfam:PF01609"
FT   repeat_region   8686..8704
FT                   /note="IR of VSa6"
FT   misc_feature    8711..9037
FT                   /locus_tag="VSAL_II0007"
FT                   /note="HMMPfam hit to PF05717, IS66 Orf2 like protein,score
FT                   5.1e-32"
FT                   /inference="protein motif:HMMPfam:PF05717"
FT   CDS             join(9115..10206,10210..10602)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0009"
FT                   /old_locus_tag="TVS3444"
FT                   /product="transposase (pseudogene)"
FT                   /note="Similar to Shewanella sp. (strain W3-18-1)
FT                   transposase is66. UniProt:A1RLT8 (EMBL:CP000503) (500 aa)
FT                   fasta scores: E()=3.6e-119, 56.998% id in 493 aa. CDS
FT                   contains a translational stop codon (TAG) after codon 364"
FT                   /db_xref="PSEUDO:CAQ80763.1"
FT                   /inference="similar to sequence:UniProt:A1RLT8"
FT   repeat_region   10595..10618
FT                   /note="IR of VSa2"
FT   CDS             complement(10763..12406)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0010"
FT                   /old_locus_tag="TVS3447"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="InterPro:IPR005646"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ03"
FT                   /protein_id="CAQ80764.1"
FT                   /translation="MIEHFLAFSENESVVHFTIPENTTLTQPIEAADIHHALHTMGANE
FT                   YYLFENKLEDILSAFNKGDFTAITNTLIAQRLDAQLSIHLQEDEMIASMTVTGAYGGHS
FT                   VRGPAIVAALTENYILKGIKKENLKTLLLKSKALTPGETYSDIIAVGREAIQGEDTVFI
FT                   ASVPNIRERILQPQKTTDGHVDMRNLGEVISVKKNTPLMTRIPATQGVDGKTVTGKRIA
FT                   AVPGNEHFFHLYPGSSISLVDPNLLISDIDGTPLIHGSGVAIDNLLTLKTVNATTGHVS
FT                   FEGSIFIQEDIESGMKVTATGGITVGGFIENAEVIAKHDITVMNGIIGRPMPEGEALTC
FT                   LVNTEGSITTKLAQNAHLIAHDDIHITLHANHCLVESLGSIFVIDKAERNGTISGGSAT
FT                   ANGSIKTANLGIEGGAYTKVHAFHNFTDQKETLHSLQKRFDDVSAQIIKMSQINIARQS
FT                   PELAEKILRSKEQSNQDLLILKSELAKEQITFNKGLKENHVFVTNKIFPRVDVQFNTEH
FT                   LVTKREYSPSKISYSGYDIDIEPVMIKKKY"
FT   misc_feature    complement(10784..12178)
FT                   /locus_tag="VSAL_II0010"
FT                   /note="HMMPfam hit to PF03961, Protein of unknown function
FT                   (DUF342), score 3e-53"
FT                   /inference="protein motif:HMMPfam:PF03961"
FT   CDS             complement(12519..14438)
FT                   /transl_table=11
FT                   /gene="recQ"
FT                   /locus_tag="VSAL_II0011"
FT                   /old_locus_tag="TVS3448"
FT                   /product="putative ATP-dependent DNA helicase"
FT                   /EC_number="3.6.1.-"
FT                   /note="Similar to Escherichia coli ATP-dependent DNA
FT                   helicase RecQ UniProt:P15043 (608 aa) fasta scores:
FT                   E()=2.7e-51, 45.201% id in 323 aa"
FT                   /db_xref="GOA:B6EQ04"
FT                   /db_xref="InterPro:IPR018329"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ04"
FT                   /inference="similar to sequence:UniProt:P15043"
FT                   /protein_id="CAQ80765.1"
FT                   /translation="MTYQQTLKDVFGFDSLRGGQQQVIEKVLNGHSSAAIFPTGSGKSL
FT                   CYQLPALLLPNLTLVISPLLALMKDQITFLKSKGIAAASIDSTQTREETQAILQGVRNG
FT                   DIKILMISVERLKNERFRQFIAQINISLLVVDEAHCISEWGHNFRPDYLKLPQDREALN
FT                   IPHVLLLTATATPAVIEDMSKKFKIEKDDIVITGFYRSNLDISIIPVEEEQKRSTLFAT
FT                   LQQKPNQPNIVYVTLQQTAENVAQWLQSNGIQAKAYHAGLKHDIREDIQHKFMNGELNC
FT                   IVATIAFGMGVDKSDVRQVIHFDLPKSIENYSQEIGRAGRDGAPSFCTVLANTSGLNVL
FT                   ENFVYGDTPDREAIQYVLDDIYKSSDTWEIQLLRLSKDSNVRQLPLKTLLVYLELKQII
FT                   QAKYSYYADYRFKTLIPVSEIVGKFQTERQHFVSIIFQCSPKAKTWHTVDFDALWMGYQ
FT                   GERKRVISALDYFHEQGWIELESKLMTEVYQVLNKVESTHVLSQEQHQLFKNKEESEIK
FT                   RIHTMLDFFETKTCLSHSLAHYFADYNAPEQCGHCSACRSEGAHLPRNSVSFLADDEQV
FT                   RSWCQELQNNSKAPLANAVFARFLCGISTPLTTKIKANKMQGYAKFESQPFFEVLELVG
FT                   KLNG"
FT   misc_feature    complement(13470..13700)
FT                   /gene="recQ"
FT                   /locus_tag="VSAL_II0011"
FT                   /note="HMMPfam hit to PF00271, Helicase conserved
FT                   C-terminal domain, score 1.9e-28"
FT                   /inference="protein motif:HMMPfam:PF00271"
FT   misc_feature    complement(13893..14390)
FT                   /gene="recQ"
FT                   /locus_tag="VSAL_II0011"
FT                   /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,score
FT                   1.3e-27"
FT                   /inference="protein motif:HMMPfam:PF00270"
FT   misc_feature    complement(14019..14048)
FT                   /gene="recQ"
FT                   /locus_tag="VSAL_II0011"
FT                   /note="PS00690 DEAH-box subfamily ATP-dependent helicases
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00690"
FT   CDS             complement(14438..14851)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0012"
FT                   /old_locus_tag="TVS3449"
FT                   /product="putative peptidyl-tRNA hydrolase"
FT                   /db_xref="GOA:B6EQ05"
FT                   /db_xref="InterPro:IPR000352"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ05"
FT                   /protein_id="CAQ80766.1"
FT                   /translation="MLTISNYVQLASWEIELTAIRAQGAGGQNVNKVSSAIHLRFDINS
FT                   STLPPFYKERLLKMKDSRITKEGVIVIKAQQFRTQEKNREDALERLKVLIQSAAETQKA
FT                   RRETKPTRNSQRRRVDNKTQHGQTKNMRKKVDY"
FT   misc_feature    complement(14456..14851)
FT                   /locus_tag="VSAL_II0012"
FT                   /note="HMMPfam hit to PF00472, Peptidyl-tRNA hydrolase
FT                   domain, score 1.1e-24"
FT                   /inference="protein motif:HMMPfam:PF00472"
FT   misc_feature    complement(14741..14791)
FT                   /locus_tag="VSAL_II0012"
FT                   /note="PS00745 Prokaryotic-type class I peptide chain
FT                   release factors signature."
FT                   /inference="protein motif:ProSite:PS00745"
FT   CDS             14938..15294
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0013"
FT                   /old_locus_tag="TVS3450"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ06"
FT                   /protein_id="CAQ80767.1"
FT                   /translation="MSVKEELQKIHHRLDRCKHRLEAAQKRDDQPIVKQFLHEIQTLEK
FT                   KVAKLNGKKQFETGNKGTEVRNLDFKRAITKAEQADMGKLKKAVRGLVVVHPMTALGRE
FT                   LGLKEMTGFAPEAF"
FT   CDS             15463..16461
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0014"
FT                   /old_locus_tag="TVS3451"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="GOA:B6EQ07"
FT                   /db_xref="InterPro:IPR016909"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ07"
FT                   /protein_id="CAQ80768.1"
FT                   /translation="MSHSHFSKNQSASKSNNEAPIKKSMHPRNKHNASYDFPALIATFP
FT                   ELKAFVETNQYGNESINFSDPLAVKALNKALLAHFYDVPFWDIPEGYLCPPIPGRADYI
FT                   HNIADLLAITNDGEIPTGKSVKGLDIGVGANCVYPILGHSEYKWNFVGSDTDPQALKMA
FT                   SFIANNNPSLKKSIECRLQANDEHIFKGIIKPQDEFAFTMCNPPFHASEEEATAGSERK
FT                   QQNLATSKSKKGHAYNELKGVKKLNFGGQNAELWYEGGEIAFITKMAQESCEFALQVQW
FT                   FTTLISKKENVDTLYQELTRLGVKTIKTIDMAQGHKISRFVAWTFQANVNL"
FT   misc_feature    15517..16446
FT                   /locus_tag="VSAL_II0014"
FT                   /note="HMMPfam hit to PF05971, Protein of unknown function
FT                   (DUF890), score 6.5e-165"
FT                   /inference="protein motif:HMMPfam:PF05971"
FT   misc_feature    15811..15834
FT                   /locus_tag="VSAL_II0014"
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS             16639..17757
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0015"
FT                   /old_locus_tag="TVS3452"
FT                   /product="secretion protein, HlyD family"
FT                   /note="Similar to Enterobacter aerogenes AcrA protein
FT                   precursor UniProt:Q9AEG2 (399 aa) fasta scores:
FT                   E()=2.3e-33, 34.973% id in 366 aa"
FT                   /db_xref="GOA:B6EQ08"
FT                   /db_xref="InterPro:IPR006143"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ08"
FT                   /inference="similar to sequence:UniProt:Q9AEG2"
FT                   /protein_id="CAQ80769.1"
FT                   /translation="MKSKTLLASLVSAALLVGCSDDTVKNTPPQAPLVVAHTVESIQYQ
FT                   QGKTYIGRIEAMEDASIVAHVSGYIQSRSFKEGQMVTKGDVLFQIDPSSFEAQVANAKA
FT                   GITQANAELKKAQLDFQRGKNLLPKGNISQAEFDGLTAQLLSGEAQVESAQAQLKLAEV
FT                   NLSYTTILAPFSGRISDSKVSLGDLVSSASGELTTLVSLDPIQTRFTISERERLLMGID
FT                   QVKGDGSGASNQVEVVLNLENGEEYKHLGKIDYISNRIDQTTGTLTLRALVDNPDYTLL
FT                   PGQHINVNLREKIPTDVVVTPRRAVQSDLEGSFVMVLTEGNVAERRNVTLGKQLPEGVI
FT                   ISSGLEANEQVLVKGLQRVRNGVQVRLENVES"
FT   sig_peptide     16639..16698
FT                   /locus_tag="VSAL_II0015"
FT   misc_feature    16810..17697
FT                   /locus_tag="VSAL_II0015"
FT                   /note="HMMPfam hit to PF00529, HlyD family secretion
FT                   protein, score 2e-24"
FT                   /inference="protein motif:HMMPfam:PF00529"
FT   CDS             17759..18439
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0016"
FT                   /old_locus_tag="TVS3453"
FT                   /product="putative plasmid-encoded multidrug efflux pump
FT                   (fragment)"
FT                   /note="Similar to Escherichia coli OqxB UniProt:Q69HW2
FT                   (1050 aa) fasta scores: E()=5.7e-42, 53.571% id in 224 aa.
FT                   CDS is truncated by the insertion of the downstream IS
FT                   element and subsequent recombination events"
FT                   /inference="similar to sequence:UniProt:Q69HW2"
FT   sig_peptide     17759..17845
FT                   /locus_tag="VSAL_II0016"
FT   misc_feature    17792..17860
FT                   /locus_tag="VSAL_II0016"
FT   repeat_region   complement(18442..19877)
FT                   /note="VSa9"
FT   CDS             complement(18608..19798)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0017"
FT                   /old_locus_tag="TVS3455"
FT                   /product="transposase"
FT                   /db_xref="GOA:B6EQ09"
FT                   /db_xref="InterPro:IPR007069"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ09"
FT                   /protein_id="CAQ80771.1"
FT                   /translation="MHAYKPLKQLFNSQNNGLKFLHNNKANLRAVVIENVTKMLSCGTA
FT                   AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT
FT                   LPNTLWPIFRHNRLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHLS
FT                   VTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDWS
FT                   RFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLDH
FT                   RTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIEA
FT                   EPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA"
FT   CDS             complement(19931..20536)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0018"
FT                   /old_locus_tag="TVS3456"
FT                   /product="outer membrane protein OmpA family"
FT                   /note="Similar to Pseudomonas aeruginosa Outer membrane
FT                   porin F precursor OprF UniProt:P13794 (350 aa) fasta
FT                   scores: E()=3.2e-14, 37.179% id in 156 aa"
FT                   /db_xref="GOA:B6EQ10"
FT                   /db_xref="InterPro:IPR018247"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ10"
FT                   /inference="similar to sequence:UniProt:P13794"
FT                   /protein_id="CAQ80772.1"
FT                   /translation="MKKLIYPTLITSLFLTACVSGDKDYIETPAPSQIADLRDNDNDGV
FT                   INARDICPGTPRGAQIDNDGCAEYVEQSDKKDLKILFANNSSEISPIFKSEIRTMAEFL
FT                   AEYPETSIQLQGFASQQGNAEYNIRLSELRASAVRVALINYGVNPDKIETIGFGDTLLT
FT                   AKGDSAVSHALNRRVVATVVGFKGDVVDEWNIFTRKKK"
FT   misc_feature    complement(20009..20296)
FT                   /locus_tag="VSAL_II0018"
FT                   /note="HMMPfam hit to PF00691, OmpA family, score 1.9e-16"
FT                   /inference="protein motif:HMMPfam:PF00691"
FT   misc_feature    complement(20384..20422)
FT                   /locus_tag="VSAL_II0018"
FT                   /note="PS00018 EF-hand calcium-binding domain."
FT                   /inference="protein motif:ProSite:PS00018"
FT   sig_peptide     complement(20477..20536)
FT                   /locus_tag="VSAL_II0018"
FT   CDS             complement(20539..21861)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0019"
FT                   /old_locus_tag="TVS3457"
FT                   /product="outer membrane efflux protein"
FT                   /db_xref="GOA:B6EQ11"
FT                   /db_xref="InterPro:IPR010130"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ11"
FT                   /experiment="The expressed protein is found to be
FT                   associated with the outer membrane in Aliivibrio
FT                   salmonicida"
FT                   /protein_id="CAQ80773.1"
FT                   /translation="MKWIKLATCSSLLVLSVSTQAQTLEQAISQTLTTNPEVKKAYNAY
FT                   MSYVEDSNSVSGNYLPSIDLDAGIGLENINPAPNNGDDTSLTRKDATLSLTQLIWDGSS
FT                   TINDMDRTQAEAESARLQLISLGENKALDVSQVYLDAVKATEILALSESNLAIHKKIYK
FT                   DIKKRAESGIGSTADVSQVEARIARAHGNLLAAQNNLFDTHTVFTQIVGSPPQALIYPR
FT                   ADANTLPLSLQEGVERAYEHHPVILIAQSDIQAAKYQYAQSKGTNYPTLSFEAAQTWRD
FT                   DAGGIEGSSDEFSAMVRMRYNLYNGGSDNAQSEKSAYQLNMAKDLRDSAYRNVEEGFRL
FT                   SWSALDLTLQQKEFLADHVDAASDTVIAYEKQYRIGKRTLLDLLNTENELFEARKSYLD
FT                   AHYAEQFAKFRVLHATGTLIPSLLIDTPKEWNSQKSKEEEK"
FT   misc_feature    complement(20614..21168)
FT                   /locus_tag="VSAL_II0019"
FT                   /note="HMMPfam hit to PF02321, Outer membrane efflux
FT                   protein, score 4.1e-23"
FT                   /inference="protein motif:HMMPfam:PF02321"
FT   misc_feature    complement(21226..21792)
FT                   /locus_tag="VSAL_II0019"
FT                   /note="HMMPfam hit to PF02321, Outer membrane efflux
FT                   protein, score 1.2e-24"
FT                   /inference="protein motif:HMMPfam:PF02321"
FT   sig_peptide     complement(21799..21861)
FT                   /locus_tag="VSAL_II0019"
FT   CDS             22375..31047
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0020"
FT                   /old_locus_tag="TVS3458"
FT                   /product="hemolysin-type calcium-binding protein"
FT                   /note="Similar to Staphylococcus hyicus Biofilm-associated
FT                   protein Bap UniProt:Q4ZHU0 (3278 aa) fasta scores:
FT                   E()=2.4e-25, 24.872% id in 2738 aa. Expression may be
FT                   regulated by Fur"
FT                   /db_xref="GOA:B6EQ12"
FT                   /db_xref="InterPro:IPR019960"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ12"
FT                   /inference="similar to sequence:UniProt:Q4ZHU0"
FT                   /protein_id="CAQ80774.1"
FT                   /translation="MDLGNNVMAIKTSTNDKQIIVIDKNGNLKLMTSGETVLPGDVVLE
FT                   KDSGEVFVNRDDLPKDNNNEIKDILDAIVDGKDPSLVSDSPAAGEESGSSLTTSTEIER
FT                   VGKSTIAETDFDTSSLEALGLSKTQSLTLLDQYKFYKETGSFDNPINIGNIINQKVGFV
FT                   VDSNLSDNTISENAAIGDVVNITGLATDPDGDVVSYTLSQDDIDAGLFAIDATTGVVTV
FT                   IGNLDHDTAPSHSIDIIATSTDGSTSTGSFDITVTDADGTLAGGGDTDNPVGPVTDSNA
FT                   SDNTISENAAIGDVVNISGLATDPDGDAVSYTLSAADIAAGLFAIDATTGVVTVIGNLD
FT                   HELNDTHSIEIIATSTDGSTSTDSFTINVTDADGTLPGGGDTDNPVGPVTDSNASDNTI
FT                   SENAAIGDVVNITGLATDPDGDMVTYTLSQDDIDAGLFAIDATTGVVTVIGNLDHELNE
FT                   THSIEIIATSTDGSTSTDSFTINVTDADGTLPGGGDTDNPVGPVTDSNASDNTISENAA
FT                   IGDVVNITGLATDPDGDTVTYTLSQDDIDAGLFAIDATTGVVTVIGNLDHELNETHSIE
FT                   IIATSTDGSTSTDSFTINVTDADGTLPGGGDTDNPVGPVTDSNASDNTISENAAIGDVV
FT                   NITGLATDPDGDTVTYTLSQDDIDAGLFAIDATTGVVTVIGNLDHETAPSHSIEIIATS
FT                   TDGSTSTDSFTINVTDADGTLPGGGDTDNPVGPVTDSNDSDNTISENAAIGDVVNIIGL
FT                   ATDPDGDAVSYSLSAADIAAGLFAIDATTGVVTVIGNLDHELNDTHSIEIIATSTDGST
FT                   NTGSFDITVTDADGTLPGGGDTDNPVGPVTDSNASDNTISENAEIGDVVNITGLATDPD
FT                   GDAVSYSLSAADIAAGLFAIDATTGVVTVIGNLDHDTAPSHSIDIIATSTDGSTSTGSF
FT                   TINVTDADGTQPGGGDTDNPVGPVTDSNASDNTISENAAIGDVVNITGLATDPDGDTVT
FT                   YTLSQDDIDAGLFAIDATTGVVTVIGNLDHDTAPSHSIDIIATSTDGSTSTGSFTINVT
FT                   DADGTQPGGGDTDNPVGPVTDSNASDNTISENAAIGDVVNITGLATDPDGDVVTYTLSQ
FT                   DDIDAGLFAIDATTGVVTVIGNLDHDTTPSHSIDIIATSTDGSTSTDSFTINVTDAEGT
FT                   LPGGGDTDNPVGPVTDSNASDNTISENAAIGDVVNITGLATDPDGDAVSYTLSPADIAA
FT                   DLFAIDATTGVVTVIGNLDHELNETHSIEIIATSTDGSTSTDSFTINVTDADGTLPGGG
FT                   DTDNPVGPVTDSNASDNTISENAAIGDVVNIIGLATDPDGDAVSYSLSPADIAAGLFAI
FT                   DATTGVVTVIGNLDFETEEQHQIEIIAISTDGSMSTETFTINVSDFDEIAPDAPIITNI
FT                   TDDSIASDYSKVTMNGTGEPGASIMLFDDSGVQLNTTQILVSNDGSWSFDISNVSGIDH
FT                   NENEIFTVKQMDAAGNISDPSEVVHYYHGDLVTPITESSDDYVLLGSGDDYLTVGSDDN
FT                   NDYLVSDGGAGTDTAILNFALATANIMLNDDGSITITEMNGDVNTFIEFEEFEFTDGNK
FT                   SADELFSPEVTIARDEDDIINSDREQITYEIKLPAGAVIGAILSIIVEGNLIETITLDQ
FT                   SHLDSGVINRDLNIVDVTDGSLDVSAEIVYPNQPQGSEFKDTDALDINIDPIATDFELN
FT                   LINDSSIQFSFEPHVSDTEDDVNQNDGKATTIEIMDLPELGSLYLVDGNTRTEITESTV
FT                   LTEDSQIEYVLNSTINDDLSFNATDDFAPNYNNGTVTSFTLASGVIVSGGTYSGTRPDT
FT                   TSTLTADELYYDSATNETGLGVGNSEIDVNSKDYIEVDFTDVGNANTTDVDIREVNIDF
FT                   GSVFGNYSENSNANAEIHILLFKDGVLVGESPYIFDDETHNVYDGSGEFTANLQLDSGF
FT                   DQIRVYTVHGEGSTASNSNVTLQGVEVVDAMVSESIPYEVTDSDKGIDSGVITVSTEST
FT                   DRAMNNAPVVDDIFFRSEGTEDTVIQLNLNDLLISDSDGDDVTLLNITVDPASGSLELL
FT                   FDGDEVVGATFTPAENKHFDSNAPVEFQVTVTDGYEESTGTAKLIVNAVADEPILSVVF
FT                   GESTISGPGFDTSNIESIKDFFANGGTLPDIGNVIYNGQIVVGDDGNNLIIGSGGVNNL
FT                   VGDSVQGTGNDVFVGGVYNDSIYGGTGPLDFGIDAVIYSGNIDEYLITNQGGAHGGGVD
FT                   HWVITDTLGRDTGYDHTAPEDNGDQLYQIERLVFADAIVELNPDGSYIIIQETETSLDL
FT                   SASVTDIDGSEYLDEIKISGLPDGAQIIDKNSNEPLGEFKTINGEQVWVIDITGQSTQT
FT                   INYDNLVVRYPSTETLDIDVSAVAKESSNNSEATTTVNASPSQDIYADQGGETPTTLIS
FT                   LVLDSSGSMDHKPFKSDNSNPDQDKTRMELVLEASIAMLDNVKVQEGSEEVKVQLVDFD
FT                   DQKHSSQDKDVESLGWFTVQSAIDALNAALVDIAEKDKDEHFYPKGGTDYEEGIYAVMS
FT                   GYQDTQITNITGETNDVVYFLSDGDNNGGWHGGNSGPKDEWEEFIIGKDVTAIGIVRDP
FT                   NTTLNGLSNISSKVIYLTDGQLITELPRLRPTIGQVGTLLTAIIGLDAAAVVIDVDKID
FT                   ILQQIDQNGNVSNSHLIASEDNNQLVIDTEYGDLRIAQDGSYYFQPSASAPEIETGKSI
FT                   GFEILYTVEDDAGAESEQLVTLNVSPNGEVNAVVTSSFNGSTGDDVIVGTENDDIILGH
FT                   EGDDVLIGGLGDDILTGGAGEDIFKWIDQGVSSGTDTIKDFSKGEDLIDLTELLSDDVH
FT                   QNDLTDLLAHITISEDGDDLALAIKDDIGNDHTIIVEGGVNSFGLEDANFSNQSEILTK
FT                   LLHDQLFKLDDVP"
FT   misc_feature    22879..23145
FT                   /locus_tag="VSAL_II0020"
FT                   /note="HMMPfam hit to PF00028, Cadherin domain, score
FT                   7.9e-05"
FT                   /inference="protein motif:HMMPfam:PF00028"
FT   misc_feature    23218..23484
FT                   /locus_tag="VSAL_II0020"
FT                   /note="HMMPfam hit to PF00028, Cadherin domain, score
FT                   2.4e-05"
FT                   /inference="protein motif:HMMPfam:PF00028"
FT   misc_feature    23557..23823
FT                   /locus_tag="VSAL_II0020"
FT                   /note="HMMPfam hit to PF00028, Cadherin domain, score
FT                   2.9e-07"
FT                   /inference="protein motif:HMMPfam:PF00028"
FT   misc_feature    23896..24162
FT                   /locus_tag="VSAL_II0020"
FT                   /note="HMMPfam hit to PF00028, Cadherin domain, score
FT                   2e-06"
FT                   /inference="protein motif:HMMPfam:PF00028"
FT   misc_feature    24235..24501
FT                   /locus_tag="VSAL_II0020"
FT                   /note="HMMPfam hit to PF00028, Cadherin domain, score
FT                   8.1e-06"
FT                   /inference="protein motif:HMMPfam:PF00028"
FT   misc_feature    24574..24840
FT                   /locus_tag="VSAL_II0020"
FT                   /note="HMMPfam hit to PF00028, Cadherin domain, score
FT                   1.7e-07"
FT                   /inference="protein motif:HMMPfam:PF00028"
FT   misc_feature    24913..25179
FT                   /locus_tag="VSAL_II0020"
FT                   /note="HMMPfam hit to PF00028, Cadherin domain, score
FT                   0.00011"
FT                   /inference="protein motif:HMMPfam:PF00028"
FT   misc_feature    25252..25518
FT                   /locus_tag="VSAL_II0020"
FT                   /note="HMMPfam hit to PF00028, Cadherin domain, score
FT                   1.9e-05"
FT                   /inference="protein motif:HMMPfam:PF00028"
FT   misc_feature    25591..25857
FT                   /locus_tag="VSAL_II0020"
FT                   /note="HMMPfam hit to PF00028, Cadherin domain, score
FT                   0.00026"
FT                   /inference="protein motif:HMMPfam:PF00028"
FT   misc_feature    25930..26196
FT                   /locus_tag="VSAL_II0020"
FT                   /note="HMMPfam hit to PF00028, Cadherin domain, score
FT                   3.3e-05"
FT                   /inference="protein motif:HMMPfam:PF00028"
FT   misc_feature    26269..26535
FT                   /locus_tag="VSAL_II0020"
FT                   /note="HMMPfam hit to PF00028, Cadherin domain, score
FT                   6.2e-07"
FT                   /inference="protein motif:HMMPfam:PF00028"
FT   misc_feature    28828..28881
FT                   /locus_tag="VSAL_II0020"
FT                   /note="HMMPfam hit to PF00353, Hemolysin-type
FT                   calcium-binding repeat, score 5.7"
FT                   /inference="protein motif:HMMPfam:PF00353"
FT   misc_feature    28894..28947
FT                   /locus_tag="VSAL_II0020"
FT                   /note="HMMPfam hit to PF00353, Hemolysin-type
FT                   calcium-binding repeat, score 6.3"
FT                   /inference="protein motif:HMMPfam:PF00353"
FT   misc_feature    30616..30669
FT                   /locus_tag="VSAL_II0020"
FT                   /note="HMMPfam hit to PF00353, Hemolysin-type
FT                   calcium-binding repeat, score 0.013"
FT                   /inference="protein motif:HMMPfam:PF00353"
FT   misc_feature    30634..30690
FT                   /locus_tag="VSAL_II0020"
FT                   /note="PS00330 Hemolysin-type calcium-binding region
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00330"
FT   misc_feature    30670..30723
FT                   /locus_tag="VSAL_II0020"
FT                   /note="HMMPfam hit to PF00353, Hemolysin-type
FT                   calcium-binding repeat, score 0.0024"
FT                   /inference="protein motif:HMMPfam:PF00353"
FT   CDS             31164..31799
FT                   /transl_table=11
FT                   /gene="pdxH"
FT                   /locus_tag="VSAL_II0021"
FT                   /old_locus_tag="TVS3459"
FT                   /product="pyridoxamine 5'-phosphate oxidase"
FT                   /EC_number="1.4.3.5"
FT                   /db_xref="GOA:B6EQ13"
FT                   /db_xref="InterPro:IPR012349"
FT                   /db_xref="UniProtKB/Swiss-Prot:B6EQ13"
FT                   /protein_id="CAQ80775.1"
FT                   /translation="MELEDIRRDYSLGGLRRADLPQAPIELFELWLKQAVEAKLTDPTA
FT                   MTVATVDKKGQPFQRIVLLKHFDSTGFVFYTNLASRKAQHLEDNSKISLHFPWHPLERQ
FT                   VHITGTAEKLTALENMKYFTSRPKESQIAAWASKQSSRLTARAALEGKYLELKQQFSKG
FT                   EIPVPKFWGGFRVKIDSIEFWQGGDSRLHDRFLYSKDQDKWVIDRLAP"
FT   misc_feature    31257..31517
FT                   /gene="pdxH"
FT                   /locus_tag="VSAL_II0021"
FT                   /note="HMMPfam hit to PF01243, Pyridoxamine 5'-phosphate
FT                   oxidase, score 6.3e-30"
FT                   /inference="protein motif:HMMPfam:PF01243"
FT   misc_feature    31704..31745
FT                   /gene="pdxH"
FT                   /locus_tag="VSAL_II0021"
FT                   /note="PS01064 Pyridoxamine 5'-phosphate oxidase
FT                   signature."
FT                   /inference="protein motif:ProSite:PS01064"
FT   repeat_region   31898..32106
FT                   /note="VSa2"
FT   repeat_region   31898..31921
FT                   /note="IR of VSa2"
FT   CDS             31977..32105
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0022"
FT                   /old_locus_tag="TVS3459a"
FT                   /product="putative transposase (fragment)"
FT                   /note="CDS is truncated by the insertion of a downstream IS
FT                   element. Also, the N-terminal part of the CDS seems to be
FT                   truncated"
FT   repeat_region   32107..41138
FT                   /note="repetead in VSAL_II1090 - VSAL_II1097"
FT   repeat_region   complement(32107..34323)
FT                   /note="VSa2"
FT   repeat_region   complement(32107..32130)
FT                   /note="IR of VSa2"
FT   CDS             complement(32123..33610)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0023"
FT                   /old_locus_tag="TVS3460"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR004291"
FT                   /db_xref="UniProtKB/TrEMBL:B6EHG8"
FT                   /protein_id="CAQ80777.1"
FT                   /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS
FT                   ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC
FT                   CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK
FT                   GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL
FT                   HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY
FT                   HPVNFLKGYNGYLHTDGYQGYEQTEAMLVGCWAHARRRFIEAQRVQVKGKTGSADWVLS
FT                   KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT
FT                   LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA
FT                   KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV"
FT   CDS             complement(33682..34029)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0024"
FT                   /old_locus_tag="TVSa0062"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR008878"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN4"
FT                   /protein_id="CAQ80778.1"
FT                   /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI
FT                   FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL
FT                   GHQPVHYQTTL"
FT   CDS             complement(join(34026..34079,34078..34242))
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0025"
FT                   /old_locus_tag="TVSa0062b"
FT                   /product="transposase (pseudogene)"
FT                   /note="Similar to Pseudoalteromonas haloplanktis Putative
FT                   orphan protein; putative transposase UniProt:Q3IIG2 (99 aa)
FT                   fasta scores: E()=0.053, 35.3% id in 51 aa. CDS contains a
FT                   frameshift and a 32 aa residue deletion after codon 55"
FT                   /db_xref="PSEUDO:CAQ80779.1"
FT                   /inference="similar to sequence:UniProt:Q3IIG2"
FT   repeat_region   34300..34323
FT                   /note="IR of VSa2"
FT   tRNA            complement(34413..34500)
FT                   /locus_tag="VSAL_II1106t"
FT                   /product="transfer RNA-Ser"
FT   CDS             complement(34583..35080)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0026"
FT                   /old_locus_tag="TVSa0063"
FT                   /product="putative exported protein"
FT                   /db_xref="InterPro:IPR008503"
FT                   /db_xref="UniProtKB/TrEMBL:B6EPY2"
FT                   /protein_id="CAQ80780.1"
FT                   /translation="MKKLLLSFSLLLLSFSSFAHEECSNKEIVGQIETIHIKELDSNYK
FT                   ARIDTGAATTSIHATDIKILNKEGESKNMRDHLGDTIEFTTYNEKNEASKHTGRIIRVS
FT                   KIRNAQGVERRYAVRMHLEFNGKEKKVAINLRDRSKLDYKLLIGRNWLEGDYLVDVERN
FT                   VE"
FT   CDS             complement(35194..36138)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0027"
FT                   /old_locus_tag="TVSa0064"
FT                   /product="protein alx"
FT                   /db_xref="GOA:B6EPY3"
FT                   /db_xref="InterPro:IPR005496"
FT                   /db_xref="UniProtKB/TrEMBL:B6EPY3"
FT                   /protein_id="CAQ80781.1"
FT                   /translation="MSPLTWELFGFVVLALFALDLFQTRKNTPSLKQALVWSFFWFVLA
FT                   FIFCAIIYLYWPLMAPESTYSPSDASMAFITGYLLEKMLSVDNLFVFALIFSQFIVPEQ
FT                   SRPRILLWGIIGALVLRGIMIFVGAELLTQYHWILYIFAVFLIITGIKLWFTDTEAESD
FT                   FSSSKFVVFLKKHIPFDDKYYGHQLIAKVNGKMIATPLLLVVIVIMFTDIMFALDSIPA
FT                   IFAITQEPFLVFSANVFALLGLRSLYFVLQGMLSKFCYLQPALAFILGFIGIKMFLVDT
FT                   AYEVPTAFSLLTIVGIITLAIVGSIYKNKSQDA"
FT   CDS             36529..37692
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0028"
FT                   /old_locus_tag="TVSa0065"
FT                   /product="putative membrane protein"
FT                   /db_xref="GOA:B6EPY4"
FT                   /db_xref="InterPro:IPR011990"
FT                   /db_xref="UniProtKB/TrEMBL:B6EPY4"
FT                   /protein_id="CAQ80782.1"
FT                   /translation="MDWIQVAVTGLVVLLVMVCINFFFANSKQRKVDERKEREAISYRR
FT                   ALSEARAAERQERVYKAQTGHISTQLFLAKEAEMNNFEEALHWYEMAANHDNAIAIRSV
FT                   IRLCDSRREDSELKSKSKFWGQVLAAEEGGAEKKLALGIAFIQGNGVDANIEKGIALID
FT                   EAAEMEHIPAQLFIADWYVAEANPQPNAKLAAEWNLRAAMLDNTEAQIRIGKQYAEGKG
FT                   VAVDPKKATYWLELAAESGDPKAQYFAGEMGADTTEKGNSVAYIWFWLAAANGIEAAAS
FT                   RRDHVGHLVGVDAVIGLQGMAKPLHDKMKRGKLRKHAVIKSLDKLYQRQSYFPDENEFM
FT                   VDDEPKLDANEKGIVSKPSTTTAEIEKDKKPDAVNFSQTKMDGSAKF"
FT   CDS             complement(join(37795..40074,43837..44604))
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0029"
FT                   /old_locus_tag="TVS3468"
FT                   /product="transporter, acriflavin resistance protein
FT                   (pseudogene)"
FT                   /note="Similar to Vibrio cholerae Transporter, AcrB/D/F
FT                   family UniProt:Q9KR85 (1016 aa) fasta scores: E()=0,79.606%
FT                   id in 1015 aa. CDS is disrupted by the insertion of an IS
FT                   element after codon 254"
FT                   /db_xref="PSEUDO:CAQ80783.1"
FT                   /inference="similar to sequence:UniProt:Q9KR85"
FT   misc_feature    complement(order(37813..40074,43837..44598))
FT                   /locus_tag="VSAL_II0029"
FT                   /note="HMMPfam hit to PF00873, AcrB/AcrD/AcrF family,score
FT                   1.2e-81"
FT                   /inference="protein motif:HMMPfam:PF00873"
FT   misc_feature    complement(order(37822..37890,37918..37986,38047..38115,
FT                   38125..38193,38212..38271,39217..39285,39367..39435,
FT                   39478..39531,39592..39660,39688..39756,39775..39843,
FT                   44515..44568))
FT                   /locus_tag="VSAL_II0029"
FT   repeat_region   order(40074..41138,43454..43835)
FT                   /note="VSa9"
FT   CDS             join(40153..41130,43454..43669)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0030"
FT                   /old_locus_tag="TVS3469"
FT                   /product="transposase (pseudogene)"
FT                   /note="Similar to Pseudomonas syringae pv. phaseolicola
FT                   Transposase for insertion sequence element IS801
FT                   UniProt:P24607 (410 aa) fasta scores: E()=3.8e-79,45.8% id
FT                   in 393 aa. CDS is disrupted by the insertion of an IS
FT                   element after codon 329"
FT                   /db_xref="PSEUDO:CAQ80784.1"
FT                   /inference="similar to sequence:UniProt:P24607"
FT   repeat_region   complement(41139..43453)
FT                   /note="VSa2"
FT   repeat_region   complement(41139..41162)
FT                   /note="IR of VSa2"
FT   CDS             complement(41155..42642)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0031"
FT                   /old_locus_tag="TVSb0070"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR004291"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGR2"
FT                   /protein_id="CAQ80785.1"
FT                   /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS
FT                   ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC
FT                   CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK
FT                   GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL
FT                   HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY
FT                   HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKGKTGSADWVLS
FT                   KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT
FT                   LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA
FT                   KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV"
FT   CDS             complement(42714..43061)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0032"
FT                   /old_locus_tag="TVSb0071"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR008878"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN4"
FT                   /protein_id="CAQ80786.1"
FT                   /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI
FT                   FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL
FT                   GHQPVHYQTTL"
FT   CDS             complement(43058..43372)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0033"
FT                   /old_locus_tag="TVS3472"
FT                   /product="transposase"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN3"
FT                   /protein_id="CAQ80787.1"
FT                   /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA
FT                   RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS
FT                   "
FT   repeat_region   complement(43430..43453)
FT                   /note="IR of VSa2"
FT   CDS             complement(44608..45717)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0034"
FT                   /old_locus_tag="TVS3475"
FT                   /product="secretion protein, HlyD family"
FT                   /db_xref="GOA:B6EQ25"
FT                   /db_xref="InterPro:IPR006143"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ25"
FT                   /protein_id="CAQ80788.1"
FT                   /translation="MNTSTLMLLKRTTLTVNLIIGTIFLSGCDTNETIQNSSPPVVIRP
FT                   ALIEIITHSVDAKSRFNGVVRSAQRADLAFRMNGRVIDIFVEEGQQVKKDQLLAQLDPR
FT                   DAKNALASARLEYTNSKAEYTRGKAIYEKSQAIAKSDLDTLSTRYNLAKNRLEDAKRQL
FT                   EYTQLISPFDGVIGQKMIDNHVQIQANTPVLTVHNVNKLEVLINIPDRVMLGELKGSQA
FT                   LAQISALRNENFPLLLSTYGTQADPITQTYPVVLTFEDLRGFNVLPGMTVKVVPVYPKT
FT                   QSSASTLVTIPLTAVVPNNQGDQFVWIVDQQNKIQSRPIKAGALFSNRIVVNEGLYAGE
FT                   RIVIAGVSSLTSGMEVKPYTDILVIRSGE"
FT   misc_feature    complement(44686..45513)
FT                   /locus_tag="VSAL_II0034"
FT                   /note="HMMPfam hit to PF00529, HlyD family secretion
FT                   protein, score 4e-11"
FT                   /inference="protein motif:HMMPfam:PF00529"
FT   misc_feature    complement(45634..45666)
FT                   /locus_tag="VSAL_II0034"
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   CDS             45894..46502
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0035"
FT                   /old_locus_tag="TVS3476"
FT                   /product="putative transcriptional regulator, TetR family"
FT                   /db_xref="GOA:B6EQ26"
FT                   /db_xref="InterPro:IPR012287"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ26"
FT                   /protein_id="CAQ80789.1"
FT                   /translation="MQKKLTLSQQKHLDIIHAAKNEFIEYGFLAANMDRITSSAEVSKR
FT                   TIYRHFESKEMLFESVLTVINDSVSKSVSYQFDKNKSTEAQLTEIAYKEIDVLYNTYGI
FT                   PLARTIVMEFLRQPDMANHVIKNIYSIRAITHWFSEAITAGRLKNADPRLMTDIYVSLF
FT                   QGLFLWPQVMNLASELTDEDMKSKVDTVTSVFIQSYGLT"
FT   misc_feature    45936..46076
FT                   /locus_tag="VSAL_II0035"
FT                   /note="HMMPfam hit to PF00440, Bacterial regulatory
FT                   proteins, tetR family, score 4.2e-15"
FT                   /inference="protein motif:HMMPfam:PF00440"
FT   CDS             complement(46584..47504)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0036"
FT                   /old_locus_tag="TVS3477"
FT                   /product="membrane protein"
FT                   /db_xref="InterPro:IPR007163"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ27"
FT                   /protein_id="CAQ80790.1"
FT                   /translation="MNYLTTFFKGMAMGAADVVPGVSGGTIAFITGIYDTLLESIRRIN
FT                   PSIFGLWKRDGFKAAFNHINGFFLISLFGGILTSILSLAKLITWMLHTHPIPLWSFFFG
FT                   LIIISIVHISKQIEEWSISRIIMLVAGAVFAYTITVLNPVALTPSTFTFILAGSIAICA
FT                   MILPGISGSFILLLLGMYSPILDAVKSLDLVTMALFSTGCLIGLLSFSHVLSFLLKRFR
FT                   DLTLIFLTGLMAGTLGKIWPWKEVIEWRINSKGEQVPLIEHNLSPFNYEHVTQQPALIG
FT                   FAVVGVLLGIGLVLGLEAYAKKTGK"
FT   misc_feature    complement(order(46605..46673,46776..46835,46854..46922,
FT                   46980..47048,47067..47135,47163..47219,47238..47306,
FT                   47403..47471))
FT                   /locus_tag="VSAL_II0036"
FT   misc_feature    complement(46647..47498)
FT                   /locus_tag="VSAL_II0036"
FT                   /note="HMMPfam hit to PF04018, Domain of unknown function
FT                   (DUF368), score 9.7e-116"
FT                   /inference="protein motif:HMMPfam:PF04018"
FT   CDS             complement(47611..50316)
FT                   /transl_table=11
FT                   /gene="malT"
FT                   /locus_tag="VSAL_II0037"
FT                   /old_locus_tag="TVS3478"
FT                   /product="HTH-type transcriptional regulator MalT (maltose
FT                   regulon positive regulator)"
FT                   /db_xref="GOA:B6EQ28"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ28"
FT                   /protein_id="CAQ80791.1"
FT                   /translation="MLIPSKLHFPRRLHNAILRSRVLDSLVDAAHYKLVLFRSPAGYGK
FT                   TTMAAQWLSEKDDTGWYSLDDGDNDEFKFAKYFVQAIANATSLELSHSKALTEKRQFAS
FT                   LSSLFSQVFSELLPFQKDAYIVLDDYHLITNEAIHLGLKFFLKHLPDNLTLVITSRSQP
FT                   PLNTANLRVRDLLIEIDNQSLAFDQSETSLFFSQRLNDDIDQDAITHVREHVEGWPSAL
FT                   QLIALHSIQNKQSLMNSAEAMTNLNQAHLWDYLAEEVFDHLDSETQHFLMRSAVFEHFD
FT                   AALVSDLTQRSDSQLIIENLNRFGLFINSDGEHGEWYKYHNLFAEFLSHQRQNHLAHEE
FT                   SELQFKAAHAWLAHKNIYQALRHAKKAKNDTLIAKILTEHGWHLFNNGELVLLESTIDQ
FT                   LDKDTLFASPRLAIIRAWLAQSQHNYLHVDDLLSEAQQEMSARNIILDRHVQGELDALR
FT                   AQVAINKNEPENALLLAEKALEQLEMNKYRSRIVATSVIGEYHHVSGNLAQALALMQQT
FT                   EKMAMTYGIYHQALWAILQQSEILMAQGFMQAAFDLQDNGFKLIEEQDLYQLPLHEFLL
FT                   RSRAQIYWFWFRFDEAEQCTWKGLDVLSPFDETKHLRGYSMLARLAVARGEFDKAERYL
FT                   EKCQQLLGQADYHIDWKANASSAQLFYWQAKGNTESINYWLAHADRPETRCNHFTQLQW
FT                   RNIARAYFHLGDIDTAINTLKDSQIIAQKHKLITDINRNAIMEAVLLFEDKQIDAAIEA
FT                   MHLAIKQSNQTGIIGSFLMAGQAVLKPLAKLQQKGNLTELEKHRIDQLQKALSNNKRSR
FT                   SAHFDEAFIEKVLNTPEVPELIRASPLTHREWQVLGLIYSGFSNEQIAAEFDVAPTTIK
FT                   THIRNLYQKLNLPNRKAAIAMADELVSMMK"
FT   misc_feature    complement(47638..47811)
FT                   /gene="malT"
FT                   /locus_tag="VSAL_II0037"
FT                   /note="HMMPfam hit to PF00196, Bacterial regulatory
FT                   proteins, luxR family, score 9.8e-23"
FT                   /inference="protein motif:HMMPfam:PF00196"
FT   misc_feature    complement(47677..47760)
FT                   /gene="malT"
FT                   /locus_tag="VSAL_II0037"
FT                   /note="PS00622 Bacterial regulatory proteins, luxR family
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00622"
FT   misc_feature    complement(47692..47757)
FT                   /gene="malT"
FT                   /locus_tag="VSAL_II0037"
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1294.000, SD 3.59 at aa 854-875, sequence
FT                   FSNEQIAAEFDVAPTTIKTHIR"
FT   misc_feature    complement(48406..48483)
FT                   /gene="malT"
FT                   /locus_tag="VSAL_II0037"
FT                   /note="HMMPfam hit to PF07721, Tetratricopeptide
FT                   repeat,score 0.0042"
FT                   /inference="protein motif:HMMPfam:PF07721"
FT   CDS             50713..53166
FT                   /transl_table=11
FT                   /gene="malP"
FT                   /locus_tag="VSAL_II0038"
FT                   /old_locus_tag="TVS3479"
FT                   /product="maltodextrin phosphorylase"
FT                   /EC_number="2.4.1.1"
FT                   /db_xref="GOA:B6EQ29"
FT                   /db_xref="InterPro:IPR011833"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ29"
FT                   /protein_id="CAQ80792.1"
FT                   /translation="MKTNSIKKFDKAAFQASVKQHLVSTFAADEKTATSKVWYLAMGKA
FT                   LAELTTFDLVNTENDERIKNARSVNYLSLEFLIGRLTGNNLISMGLYEDITDAMGELGH
FT                   NLTDLLEEERDPALGNGGLGRLAACFMDSLAAQEFPAIGYGLHYEYGLFRQSFDDCRQQ
FT                   EAPDAWRGVEGYPWEVARPDYAQQVGFYGKVEVYEENGVEKRCWIPGMFVEGMPWDLPI
FT                   VGYQSDTVYPLRLWECRAKAPFSLASFNNGDYFEAQHALIDAGNVTKVLYPNDNHEKGK
FT                   TLRLMQQYFHCACSIADILRRHDAAGHKIEDLPKYETIQLNDTHPTIGIPELMRILMDD
FT                   RGLSWDSAWAICSKTFAYTNHTLLPEALETWSESLISRLLPRHMEIIFKINYLFLEGVK
FT                   QKWPGDVSKLRKLSIIQEGTHRMVRMANLCVVTAYAVNGVAALHSALVKRDLFPEFNEY
FT                   FPGKLTNVTNGVTPRRWLKFCNPDLSALISEKIGNEWPAKLDQLSNIAKFADDAAFQKE
FT                   FMAVKKKNKQRLADWVQENMDIELNTDAIFDVQIKRLHEYKRQHLDLLNILSLYHRILN
FT                   EPGFDMHPRVFFFAAKAAPGYHLAKEIIFAINKVADKVNNDPRVSDFIKVVFIPDYRVS
FT                   MAEIIIPAADVSEQISTAGKEASGTGNMKMALNGAITVGTMDGANVEIREEVGDENIFI
FT                   FGLEVDEVEALVASGYNPYKYYEANPLLQAALDLLAGDEFTPGQIGQLSAIRDNLLYDG
FT                   DQYLVLADFADYVRAQNDIDAAYRDQKQWAKMAILNTALVGKFSSDRSIRDYVNNIWKL
FT                   EAINR"
FT   misc_feature    51004..53154
FT                   /gene="malP"
FT                   /locus_tag="VSAL_II0038"
FT                   /note="HMMPfam hit to PF00343, Carbohydrate
FT                   phosphorylase,score 0"
FT                   /inference="protein motif:HMMPfam:PF00343"
FT   misc_feature    52678..52716
FT                   /gene="malP"
FT                   /locus_tag="VSAL_II0038"
FT                   /note="PS00102 Phosphorylase pyridoxal-phosphate attachment
FT                   site."
FT                   /inference="protein motif:ProSite:PS00102"
FT   CDS             53224..55404
FT                   /transl_table=11
FT                   /gene="malQ"
FT                   /locus_tag="VSAL_II0039"
FT                   /old_locus_tag="TVS3480"
FT                   /product="4-alpha-glucanotransferase"
FT                   /EC_number="2.4.1.25"
FT                   /db_xref="GOA:B6EQ30"
FT                   /db_xref="InterPro:IPR013781"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ30"
FT                   /protein_id="CAQ80793.1"
FT                   /translation="MTNNNNALYQVAEMAGLANSYISAWGDEEKVSDDTLTRLLAALGY
FT                   DTKNDKTLLSSAEKKHKKEVLEAVKVVRDNEPLHVELHLGKSARISEFSWKLTTEEGEV
FT                   LEGYLQSQVISDDRVDGGALLFSLPTLKWGYHSLEIIRKRRKAPYVMTLIVTPQACYKQ
FT                   DAINDGKKLWGPSVQLYTLRTAHNWGIGDFGDLKQLVGEIANKGGDFVGLNPIHSLFPA
FT                   NPEGASPYSPSSRRWLNILYIDVCSVPEFALSNQAQEVVGSAEFQQRLNEVRQSHWVNY
FT                   TEVSSLKMGVLPFLFAEFKTRHLDKNSARAKAFLTFVEEGGDSLLQQAAFDALHNTLYS
FT                   EDQNVWGWPVFPQELQQFDNKQVQQFIADNSDQVDLYMYLQWLAFTQINDVQQFAEDKG
FT                   MDIGLYRDLAVGVADSGSETWADHGSLCLDASIGAPPDVLGPLGQNWGLPPLNPQVLKA
FT                   TAYDAYIELLRANMGACGALRIDHVLGLLRLWWIPKGEDATKGAYMYYPVEDMLSILAL
FT                   ESHRNSCSVIGEDLGTVPDEIIDLLADAGIHSYKVFFFETAEDGGYYSPTHYQEQSMSA
FT                   LCTHDMPTLRGFWHCDDLKMGEEIGLYPDAEQLKELFLSRAKSKQDILNSVDFHGFLPE
FT                   GVGRDATFVPMDRYLSDALQLHLAAGSSALLSLQLEDWLEMDKPVNIPGTVDEYPNWRR
FT                   KLSVTLDDIFNRPEVNELTKQLTDIRAQASKK"
FT   misc_feature    53752..55374
FT                   /gene="malQ"
FT                   /locus_tag="VSAL_II0039"
FT                   /note="HMMPfam hit to PF02446,
FT                   4-alpha-glucanotransferase,score 4.7e-157"
FT                   /inference="protein motif:HMMPfam:PF02446"
FT   misc_feature    55102..55149
FT                   /gene="malQ"
FT                   /locus_tag="VSAL_II0039"
FT                   /note="PS00453 FKBP-type peptidyl-prolyl cis-trans
FT                   isomerase signature 1."
FT                   /inference="protein motif:ProSite:PS00453"
FT   CDS             55428..57608
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="glgB"
FT                   /locus_tag="VSAL_II0040"
FT                   /old_locus_tag="TVS3481"
FT                   /product="1,4-alpha-glucan branching enzyme (fragment)"
FT                   /EC_number="2.4.1.18"
FT                   /note="Similar to Escherichia coli 1,4-alpha-glucan
FT                   branching enzyme glgB UniProt:P07762 (EMBL:M13751 (728 aa)
FT                   fasta scores: E()=1.5e-138, 47.411% id in 734 aa. The
FT                   insertion of the downstream IS element truncates the
FT                   original translational stop codon of the CDS. There is an
FT                   inframe translational stop codon 10 amino acid residues
FT                   further downstream within the IS element. The extended CDS
FT                   may therefore be expressed and functional"
FT                   /inference="similar to sequence:UniProt:P07762"
FT   misc_feature    55497..55730
FT                   /gene="glgB"
FT                   /locus_tag="VSAL_II0040"
FT                   /note="HMMPfam hit to PF02922, Isoamylase N-terminal
FT                   domain, score 0.02"
FT                   /inference="protein motif:HMMPfam:PF02922"
FT   misc_feature    55788..56051
FT                   /gene="glgB"
FT                   /locus_tag="VSAL_II0040"
FT                   /note="HMMPfam hit to PF02922, Isoamylase N-terminal
FT                   domain, score 4.5e-19"
FT                   /inference="protein motif:HMMPfam:PF02922"
FT   misc_feature    56172..57212
FT                   /gene="glgB"
FT                   /locus_tag="VSAL_II0040"
FT                   /note="HMMPfam hit to PF00128, Alpha amylase, catalytic
FT                   domain, score 3e-06"
FT                   /inference="protein motif:HMMPfam:PF00128"
FT   repeat_region   order(57609..57688,58696..59831)
FT                   /note="VSa2"
FT   repeat_region   57609..57632
FT                   /note="IR of VSa2"
FT   repeat_region   complement(57689..58693)
FT                   /note="VSa6"
FT   repeat_region   complement(57689..57707)
FT                   /note="IR of VSa6"
FT   CDS             complement(57716..58597)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0041"
FT                   /old_locus_tag="TVS3482"
FT                   /product="transposase"
FT                   /db_xref="GOA:B6EH02"
FT                   /db_xref="InterPro:IPR002559"
FT                   /db_xref="UniProtKB/TrEMBL:B6EH02"
FT                   /protein_id="CAQ80795.1"
FT                   /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC
FT                   MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK
FT                   GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS
FT                   LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE
FT                   ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI
FT                   KLSECEFELILA"
FT   misc_feature    complement(57776..58270)
FT                   /locus_tag="VSAL_II0041"
FT                   /note="HMMPfam hit to PF01609, Transposase DDE domain,score
FT                   9.3e-30"
FT                   /inference="protein motif:HMMPfam:PF01609"
FT   repeat_region   complement(58675..58693)
FT                   /note="IR of VSa6"
FT   CDS             58697..59011
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0042"
FT                   /old_locus_tag="TVSa0068"
FT                   /product="transposase"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ32"
FT                   /protein_id="CAQ80796.1"
FT                   /translation="MQKDKKRTPEQWHALFESQQSSKFSAAEFCRNHNILPKTFSARKA
FT                   RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS
FT                   "
FT   CDS             59008..59355
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0043"
FT                   /old_locus_tag="TVSb0072"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR008878"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN4"
FT                   /protein_id="CAQ80797.1"
FT                   /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI
FT                   FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL
FT                   GHQPVHYQTTL"
FT   CDS             59427..59831
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0044"
FT                   /old_locus_tag="TVS3485"
FT                   /product="transposase (fragment)"
FT                   /note="Similar to Shewanella putrefaciens 200 Transposase
FT                   IS66 UniProt:A2UVT1 (500 aa) fasta scores:
FT                   E()=1.4e-22,48.9% id in 135 aa. CDS is truncated by the
FT                   insertion of the downstream IS element and subsequent
FT                   recombination events"
FT                   /inference="similar to sequence:UniProt:A2UVT1"
FT   repeat_region   59832..60896
FT                   /note="VSa9"
FT   CDS             59911..60894
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0045"
FT                   /old_locus_tag="TVS3486"
FT                   /product="transposase (fragment)"
FT                   /note="Similar to Pseudomonas syringae pv. phaseolicola
FT                   Transposase for insertion sequence element IS801
FT                   UniProt:P24607 (410 aa) fasta scores: E()=5.7e-69, 47.7% id
FT                   in 325 aa. CDS is truncated by the insertion of the
FT                   downstream IS element and subsequent recombination events"
FT                   /inference="similar to sequence:UniProt:P24607"
FT   repeat_region   complement(60897..63211)
FT                   /note="VSa2"
FT   repeat_region   complement(60897..60920)
FT                   /note="IR of VSa2"
FT   CDS             complement(60913..62400)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0046"
FT                   /old_locus_tag="TVSa0070"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR004291"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGR2"
FT                   /protein_id="CAQ80800.1"
FT                   /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS
FT                   ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC
FT                   CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK
FT                   GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL
FT                   HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY
FT                   HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKGKTGSADWVLS
FT                   KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT
FT                   LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA
FT                   KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV"
FT   CDS             complement(62472..62819)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0047"
FT                   /old_locus_tag="TVSa0071"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR008878"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN4"
FT                   /protein_id="CAQ80801.1"
FT                   /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI
FT                   FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL
FT                   GHQPVHYQTTL"
FT   CDS             complement(62816..63130)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0048"
FT                   /old_locus_tag="TVS3490"
FT                   /product="transposase"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN3"
FT                   /protein_id="CAQ80802.1"
FT                   /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA
FT                   RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS
FT                   "
FT   repeat_region   complement(63188..63211)
FT                   /note="IR of VSa2"
FT   CDS             63212..63469
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0049"
FT                   /old_locus_tag="TVS3491"
FT                   /product="putative membrane protein (fragment)"
FT                   /note="Similar to C-terminal part of Vibrio fischeri
FT                   High-affinity iron permease UniProt:Q5DYT1 (276 aa) fasta
FT                   scores: E()=1.4e-26, 87.179% id in 78 aa. CDS is truncated
FT                   by the insertion of the upstream IS element and subsequent
FT                   recombination events"
FT                   /inference="similar to sequence:UniProt:Q5DYT1"
FT   misc_feature    63371..63424
FT                   /locus_tag="VSAL_II0049"
FT   CDS             complement(63564..66209)
FT                   /transl_table=11
FT                   /gene="chb"
FT                   /locus_tag="VSAL_II0050"
FT                   /old_locus_tag="TVS3492"
FT                   /product="N,N'-diacetylchitobiase precursor (chitobiase)"
FT                   /EC_number="3.2.1.52"
FT                   /db_xref="GOA:B6EQ37"
FT                   /db_xref="InterPro:IPR015883"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ37"
FT                   /protein_id="CAQ80804.1"
FT                   /translation="MFKKTLLSTLILAGLAACSSTTPEQSTVNLLAENLDVNYTVITNQ
FT                   GADDGLACKDLQAEFASCNKVNMTLTNTGAAVDSSDWTIYFHSIRLILDVENDQFKITR
FT                   VTGDLHKLEPTDKFDGFAAGEEVVIPLVAEYWQLFETDFMPGAFVTAPGAEARNIISLD
FT                   TEDTGEYVDEIIGVQLKRTLADNNVTATANTRFEKNSDVAEVDASSHIIPTPLKTTLTN
FT                   KTVDLAKGISITANGIDADQLAALNQRAELLGLETAGEYPVSVAVDKSQFKDGVSGAYT
FT                   LDVTEGKTTVVAFDEAGAFYGVQSLLALVSLDSSEIPTLNVEDAPRFEYRGVMVDVARN
FT                   FHSKEAILATVDQMAAYKLNKLHLHLTDDEGWRLEIPGLPELTDIGSNRCFDESETSCL
FT                   LPQLGSGADSDNFGSGFFTTEDYLEILTYAKNRNIEVIPEIDMPAHSRAAVMSMEARYT
FT                   RLAAEGKMEEANEYRLMDPKDESNVTTVQFYNKQSFINPCLDSSATFVDKVITEVAAMH
FT                   KAAGVPLSTWHFGGDEAKNIKLHAGFQDINDEEKIGWKGDLDLSKQDFPFAKSPQCQSL
FT                   IASGEVADFEHLPSHFAEQVSKIAAKQGIPHFQAWQDGLKHSEGADAFATESVRANFWD
FT                   TLYWGGGASAYEWADKGYDVVVSSPDYVYMDFPYEVDAKERGYYWATRATDTRKMFGFA
FT                   PENLPQNAETSVDRDGNGFESAGTVTPKKPFYGLSAQLWSETVRTDEQYEYMVFPRVIA
FT                   AAERAWHEASWENEYKAGVKYSLDTNLVNKKAQLADWTNFANTMGQRELAKLERAGIDY
FT                   RLPIPGAEIANGELSMNISFPGVTLQYSVDGGKTWAAYDNANKPKVTGDVQIRSASFTG
FT                   ERVSRVTSVK"
FT   misc_feature    complement(63570..63770)
FT                   /gene="chb"
FT                   /locus_tag="VSAL_II0050"
FT                   /note="HMMPfam hit to
FT                   PF03174,Chitobiase/beta-hexosaminidase C-term, score
FT                   1.7e-34"
FT                   /inference="protein motif:HMMPfam:PF03174"
FT   misc_feature    complement(63924..65228)
FT                   /gene="chb"
FT                   /locus_tag="VSAL_II0050"
FT                   /note="HMMPfam hit to PF00728, Glycosyl hydrolase family
FT                   20, catalyt, score 5.7e-167"
FT                   /inference="protein motif:HMMPfam:PF00728"
FT   misc_feature    complement(65232..65618)
FT                   /gene="chb"
FT                   /locus_tag="VSAL_II0050"
FT                   /note="HMMPfam hit to PF02838, Glycosyl hydrolase family
FT                   20, domain, score 3.1e-20"
FT                   /inference="protein motif:HMMPfam:PF02838"
FT   misc_feature    complement(65628..66113)
FT                   /gene="chb"
FT                   /locus_tag="VSAL_II0050"
FT                   /note="HMMPfam hit to PF03173, Putative carbohydrate
FT                   binding domain, score 1.7e-77"
FT                   /inference="protein motif:HMMPfam:PF03173"
FT   sig_peptide     complement(66153..66209)
FT                   /gene="chb"
FT                   /locus_tag="VSAL_II0050"
FT   CDS             66735..67235
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0051"
FT                   /old_locus_tag="TVS3493"
FT                   /product="inner membrane protein"
FT                   /note="Similar to Escherichia coli Inner membrane protein
FT                   YcdZ UniProt:P75916 (163 aa) fasta scores:
FT                   E()=9.8e-34,68.243% id in 148 aa"
FT                   /db_xref="InterPro:IPR009476"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ38"
FT                   /inference="similar to sequence:UniProt:P75916"
FT                   /protein_id="CAQ80805.1"
FT                   /translation="MSALIAIAITTGILSGVWGWVAVSLGLLSWAGFLGCTTYFASPIN
FT                   GIKGIGLSIATNLSGVFWAMVIIKLSSMMSLEIIGYVITAIVAFFMCAQAKKSWLNFIP
FT                   GTFIGSCATFASNGNWQVVIPSLILGVFFAYAMKTSGLWLKEKLDTEKNEALVNTKESY
FT                   QSK"
FT   misc_feature    66735..67187
FT                   /locus_tag="VSAL_II0051"
FT                   /note="HMMPfam hit to PF06496, Protein of unknown function
FT                   (DUF1097), score 3.4e-88"
FT                   /inference="protein motif:HMMPfam:PF06496"
FT   misc_feature    order(66768..66836,66879..66947,66966..67019,67098..67166)
FT                   /locus_tag="VSAL_II0051"
FT   tRNA            complement(67436..67508)
FT                   /locus_tag="VSAL_II1107t"
FT                   /product="transfer RNA-Asn"
FT   tRNA            complement(67543..67615)
FT                   /locus_tag="VSAL_II1108t"
FT                   /product="transfer RNA-Thr"
FT   tRNA            complement(67667..67754)
FT                   /locus_tag="VSAL_II1109t"
FT                   /product="transfer RNA-Ser"
FT   CDS             complement(67915..68814)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0052"
FT                   /old_locus_tag="TVS3494"
FT                   /product="response regulator protein"
FT                   /db_xref="GOA:B6EQ39"
FT                   /db_xref="InterPro:IPR001789"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ39"
FT                   /protein_id="CAQ80806.1"
FT                   /translation="MLSEQKIVIVEDDPVSRQVLHHLLKPLPSILTQNGAEALDVILNE
FT                   SIDLVLLDIHMPVMGGFEVIERLKNDDKTKDIPIIVITVNHSKEDEIRALDLGAVDFIT
FT                   KPFNAVILQKRVRNQLALKLKSDLLEKHASLDGLTNLLNRRMFDFDLESKWAEGRRLKT
FT                   NVGLIMFDIDHFKLYNDNYGHSAGDDVLVRVSRALMGALQRKTDRVYRYGGEEFTLIQF
FT                   DTDVEQLNQTAELLRECVYNLNITHEHSSYGKVSISVGVALIENDNDQSEYSLLLAADE
FT                   QLYKAKDRGRNCIASITV"
FT   misc_feature    complement(67936..68430)
FT                   /locus_tag="VSAL_II0052"
FT                   /note="HMMPfam hit to PF00990, GGDEF domain, score 1.2e-50"
FT                   /inference="protein motif:HMMPfam:PF00990"
FT   misc_feature    complement(68464..68802)
FT                   /locus_tag="VSAL_II0052"
FT                   /note="HMMPfam hit to PF00072, Response regulator receiver
FT                   domain, score 1.4e-28"
FT                   /inference="protein motif:HMMPfam:PF00072"
FT   CDS             complement(68853..71309)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0053"
FT                   /old_locus_tag="TVS3495"
FT                   /product="membrane associated response regulator,histidine
FT                   kinase"
FT                   /db_xref="GOA:B6EQ40"
FT                   /db_xref="InterPro:IPR005467"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ40"
FT                   /protein_id="CAQ80807.1"
FT                   /translation="MKRLASFSIQLLLQTAGAVITALLLLYFYMNVQFHEHEERLTELQ
FT                   LEIKLAKNDMLMLRRNEKDFMSRNEIKYHDRLEVGIKSFKGKLINIHRVLVVEGIDINS
FT                   DSLGLIQSIDEYGHSFHELSELLEALNGKNGDKGLFENLKDESIQLERDLLVLHNVELN
FT                   QMMLVLQEKIYDFYSGISGKEEAAVLFDLEQIFLLLNVMEEEVARFDNETVNDTYLIFK
FT                   NSFINIQKLHSIAGYNYRLGLYGEIRATIHDVEERLNVLFDTVSVKATNKIERFFFYSQ
FT                   VLSVVIFLLIVSVLIAVVVMTSRLEKRILRSQNQEIKANKAKSSFLANMSHEIRTPLNG
FT                   IIGMTEILSVSTLTAIQKDYLATINASSQTLLMLINDVLDLSKIESGNIEVNTHSCKIK
FT                   EVIFDTAALIAPKAQQKGVNIKIIMSENFPTYVKADEQKIRQVLMNLASNAIKFTEAGS
FT                   ISFELSLIEETDTSYRYFFSVKDTGLGIEESKHEQVFEEFKQEDDDTSKNYGGTGLGLA
FT                   ISSKMIKMMGNEIKLKSSKGVGSEFYFSLELDKDHTPEKASKSRKNKTIIYCSKSPKEL
FT                   FINEVSGYGYHVEKVYSIEEIKVQETSDSLVVLEKEDFQDKIDVVKEKYPRLPIILVRN
FT                   NTDNNAEVDSVSGYVTYPLLGSRLDNLLHSVFEHSHENETTEVEAKEGEIERGNGMVLI
FT                   VEDNKINQQVVSINLKMLGIEYKIANNGAEAVELYKRHHEEILVVLMDCMMPVMDGFEA
FT                   TKAIRQLEKNEDITLTTIIALTASILDDDIQKCFDSGMDDYLPKPFRREILQEKIAKLQ
FT                   LIYKKR"
FT   misc_feature    complement(68883..69242)
FT                   /locus_tag="VSAL_II0053"
FT                   /note="HMMPfam hit to PF00072, Response regulator receiver
FT                   domain, score 3.1e-22"
FT                   /inference="protein motif:HMMPfam:PF00072"
FT   misc_feature    complement(69663..70010)
FT                   /locus_tag="VSAL_II0053"
FT                   /note="HMMPfam hit to PF02518, Histidine kinase-, DNA
FT                   gyrase B-, and HS, score 1.2e-30"
FT                   /inference="protein motif:HMMPfam:PF02518"
FT   misc_feature    complement(70149..70346)
FT                   /locus_tag="VSAL_II0053"
FT                   /note="HMMPfam hit to PF00512, His Kinase A
FT                   (phosphoacceptor) domain, score 7.8e-25"
FT                   /inference="protein motif:HMMPfam:PF00512"
FT   misc_feature    complement(order(70410..70478,71214..71282))
FT                   /locus_tag="VSAL_II0053"
FT   sig_peptide     complement(71256..71309)
FT                   /locus_tag="VSAL_II0053"
FT   CDS             complement(71442..78503)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0054"
FT                   /old_locus_tag="TVS3496"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ41"
FT                   /protein_id="CAQ80808.1"
FT                   /translation="MAIGNNNDNEDLNGAVEQVVTEDSSSSSNSPTGNQNNQQSTMANT
FT                   VATGTDAVAPLIADDESQQNDEDDSSGSPIVENSEESNTEAVNDDESNEANDDTGSNVV
FT                   DGELDEDESTDSNAPKAPSSGDTQNVGGESSGLEPASPNAQNSDSPAPNGRSSSVSSGA
FT                   EGTGSEGEVFRDGSIDTHTFGVNVEPERSVYSNELENSDVTTDTMTFAVNVSPVNDAPT
FT                   AVDKLFTMQEDGVITFTAEELLAGSADIDSETLHIDTVTYTGINGVLSENMDGSFSFAP
FT                   NENFNGHVDLSFTVSDSEATVEANIGLTIEGVNDIPVAGATSYQVDEDHVLTFNNQQLL
FT                   ANSSDVEGDVAVQSVVYSGFEGELVDHEDGTYSFTPNENYYGELNFDVVIIDDEGTIAS
FT                   TTANIQIVSINDPVIAVDDSELGASESLIRLDSAPEHGTLEYLNDEFEWVEMVVGEEYP
FT                   ADTEVQFVANVEDVQSATCDIEVGSFDNNTETTIFDGTARTSDWGEVSGNTAVFTKEGV
FT                   TITTETTNGDLFAWNGAGTAMGAGIGDTSDNGLSNDDKLIVTIEGEDVNQITFQLDGLG
FT                   SWFDESDSHATEVMITAYDAEGNVIDSQGDYRESGDFQDEYSFTTNQPVHHFELGTSGG
FT                   GGTYVVQNMTVSRTLSEELQLVTIQPDGSETNSEFTLDLNYNTAGQPIDVTEELINVDG
FT                   DITSTPIQVLEDGRLILNVSDLLANDTDADGDPLTIVDVHTTDNSHGEVTLTEDGQILY
FT                   TPDPNYSGEADFHYVVTDGNGSFDSATVTVDVIPQQDAPITTGNLELTIDEDGTITLTQ
FT                   EELLANAVDVDGDDLTASNLSVGENADIVENEDGSFTITPDEDFNGQLDIRFDVSDGID
FT                   VVAAGIDLTVDAVNDLTVVSGDVSASTDEDHSITITQAQLLANAADIDGDALSVFDLVA
FT                   ENAEIVSHDDGSFIITPHQDFNGMINVNYGIHDGTDTVASNLQLTVDPVNDAPTFTEAN
FT                   FVANEDGSILITASELLQNASDIDGDTLSISGISVPEDQGMVVQDENRDWLYTPNPDAS
FT                   GEVALTVSVSDGTVAVDFASTISITPDADAPTLTLSLGNASITDFPAEDDGNVNDILAQ
FT                   WSTDNTSGLIETNQESVYTGVDDGRGRVIELEAHPGDESNIYQDLDLQAGETISLTFDY
FT                   SAREGYVGEGSQIDVYFDGQLIDSITQPTVGWSTYNYELTATTDNPRLEFDAPGSDSLG
FT                   GVLDKIQIVEVPVEDQNIGIDISAALTDIDGSESMQSVLVENIPEGAMLSDGVNTFTAT
FT                   ADENSVDVNEWAQNDVQFLPAENFSGEVNLQVSATSVENSNGDTETTTSPLTFTVEAVA
FT                   DAPELVITDGDGQVIEEGDEIRDDANIIELNLGAELVDQDLSETLSVTVGGAPEGSVIH
FT                   YDGSTIINDQTNGLTSYADTNITVTFEGEDAGFQNSAGYYIVEEDGSISGVELIYDNAS
FT                   QQGSGGNLIPGSSSFSFGIEEGQSFNLFVVPNGFNHNNFNSMQNGQFVFRDEDGSQSTM
FT                   SSVDPQLIFINEDGIETLVRSQNGDTVYHGGNSTNLNQDGVEHTRTTMNEQGELVYGIE
FT                   DLYGGGDRDYDDFTFTIDLGEVNQSIYSGEIPVIGDDPIVIPTVILDQVLTLELPEGFN
FT                   DEFDLIIEATSTEESNQDSATTTQTIHIDAIEYAPEVTPISAVIDEDSSITLTQDELLA
FT                   NATDINGDDLIATNLVVTNGGATVVLNEDGSYTITPDENVNGALEVSFDVNDGLHTVAT
FT                   ELQLAVTPINDAPIAPTIVVSESEDDVLLIDPNFILSQASDIDNVDLILESISIRSPAQ
FT                   ASLTQNQEGLYQVVVPEHFNGPIDIAYVVSDGELSTEGTVNVNIIPVDDAPFQSGNAHV
FT                   ATDEDGAITFNSADLIDLFGDVDSALTVSRVITAEGEEAEGTVIDNEDGTWTFTPTDDF
FT                   AGTTGLQVVVTDGSTEVSMDMNVYIRPVADGVAITTSFDGPLVFPEDSTGHFGLNIEQL
FT                   DTSEIMTSVVMTGYPVGFVVSDGEHTVTITEEGQGVDIGDWNLDSMTMVPPADFNGNFF
FT                   VTVSVVSLDEVEDPADNPITQELGSNHSDESPFELDDDGYALLLSADLLNSLDNNNAEN
FT                   VISDVIYSGDNGTLIDNDNGTWSFWTNPDYDGEVNVNFSTSDGVSHHVILTQDSVESDS
FT                   APITQTNIAEPQGAQTEPETEADYTVAPGDTLNIDIPTEISENADVDHIHIIGLPDGVE
FT                   PTQGLSDGEGNYVISDTSQPITLSIDESVSGDVRVEMMGMTAMDDPIDGAVGFSLIDVD
FT                   SSYEMQGSSADNADASVQGGDDSSGQDWTTADNTDVGVDVMDDSSSFDSATQETTADDD
FT                   LSMLNDN"
FT   CDS             78698..79012
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0055"
FT                   /old_locus_tag="TVS3497"
FT                   /product="hypothetical protein"
FT                   /db_xref="GOA:B6EQ42"
FT                   /db_xref="InterPro:IPR008207"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ42"
FT                   /protein_id="CAQ80809.1"
FT                   /translation="MLEEMFGGDKEITQQLFELYLSENSTMGNTILEQYEANDLPTLFH
FT                   TTHTLSGALGNLCEMDILPAIKEIEAATKTSNQPNKETINTVIEGLNEIKEQMESYLSR
FT                   "
FT   CDS             79067..80395
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0056"
FT                   /old_locus_tag="TVS3498"
FT                   /product="putative type I secretion protein, HlyD family"
FT                   /db_xref="GOA:B6EQ43"
FT                   /db_xref="InterPro:IPR006143"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ43"
FT                   /protein_id="CAQ80810.1"
FT                   /translation="MSNLDKIIERSINNTHIERFNNTEDGEKKVSTHKIFIVIVVFTLF
FT                   LLVWSSQATIDITVSTRGEALLDSDVEKVQHLEGGILNEVYVSPGDLVFKGQKIALLTS
FT                   KDRVSELSSTQYEITGLQIEQQKYNALISNSTPNFTAYINFPELVETHSLSWEEESNRN
FT                   RSSDELILHDIKHKQSLIASMQRRVKSSNSQLGLIKQQLKIKQQLFDEEMASYVDVLNM
FT                   KVQHMNMVREIENLREGILNEEFQLVRLEKLLDDTQKTRSTEYYAKLTEVNKQLKIKLT
FT                   QLPTISDKVDRLLVFSPVDGTVDKVNYNYLSAIISPGDSIADITPLKNTLHAEVKIPRK
FT                   DVGFIEKGQEVKLKFDAYNFAKYGVITGSISSISRSSYEEKEEEYYLAKIDITQNYLER
FT                   NGIKYHISPYMEFTADIKTGNRKIIDYALKPVMAALDESFDER"
FT   misc_feature    79169..79237
FT                   /locus_tag="VSAL_II0056"
FT   misc_feature    79274..80185
FT                   /locus_tag="VSAL_II0056"
FT                   /note="HMMPfam hit to PF00529, HlyD family secretion
FT                   protein, score 0.00027"
FT                   /inference="protein motif:HMMPfam:PF00529"
FT   CDS             80402..82627
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0057"
FT                   /old_locus_tag="TVS3499"
FT                   /product="putative membrane associated response regulator"
FT                   /db_xref="GOA:B6EQ44"
FT                   /db_xref="InterPro:IPR001789"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ44"
FT                   /protein_id="CAQ80811.1"
FT                   /translation="MKRLLQPNTPLIHVLFFITLGIILAQGAYSLREVLSVSDNNESKV
FT                   QVLLVNKSREILNGISRLNATLEVCTRSDSSCSTAQVQLFTSELSSEIDNFHALIANEK
FT                   SLASSSGILGFDLIQLYIKKYNRTFDLNELKQSLGVAFTNSTSIIDSLLLNHARLSKEK
FT                   QDNHLYTLLMLNGSLILVFALYYLLNTKLIRAAHTEKNRISSTFKSISNDLKTIDHDKV
FT                   KERISNISTSSIEKNIYAKLLSSYDQLEDQKSKTDLYQRLYNLLGYEVRGITNTIQGGV
FT                   KLLIKDADESGALLAKEIMSATNTLENLADNFNRLSNIDAMSHNKTIHFYHLISELIVL
FT                   TSTKAKQQSKNIECFVDNAIPLKMYGNQTGLFWLLLLQVSNMISASNQPKILFNATCSS
FT                   SDRVDKLTIHLTLYLYLDDYDTMKTIDALAWQQAPEKNVTNDELSTHLLNGINNYTAMT
FT                   QDLGYAQKLHVSFDINTSEYQTHNNRLADKTILLCGASGIQVDVIANTLSNQGANVIIA
FT                   HTANDIFKSMKRLIANDGIFLTDRIKGITLDSFCKTLKARLTKRNIKLFLSVSNSSDID
FT                   DVYNHVDYVFYHPFTPVDFIDNILTTLDSDSGKAEEITSRFLIVEDDKVQQFILNKILT
FT                   GFEFQSEGVDDGEKALALVKENNFDIIFMDCIMPGMGGMEATSLIRQYEKEHHLPPTTI
FT                   IGATALTSNKEHKQCIDAGMDYVISKPYKNEEIYAVIKKYMAIRKVG"
FT   sig_peptide     80402..80497
FT                   /locus_tag="VSAL_II0057"
FT   misc_feature    order(80429..80497,80903..80971)
FT                   /locus_tag="VSAL_II0057"
FT   misc_feature    82244..82597
FT                   /locus_tag="VSAL_II0057"
FT                   /note="HMMPfam hit to PF00072, Response regulator receiver
FT                   domain, score 3.9e-25"
FT                   /inference="protein motif:HMMPfam:PF00072"
FT   CDS             82627..83997
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0058"
FT                   /old_locus_tag="TVS3500"
FT                   /product="putative type I toxin secretion system, outer
FT                   membrane efflux protein"
FT                   /note="Similar to Pseudomonas aeruginosa Alkaline protease
FT                   secretion protein AprF UniProt:Q03027 (481 aa) fasta
FT                   scores: E()=1.8e-12, 20.588% id in 408 aa"
FT                   /db_xref="GOA:B6EQ45"
FT                   /db_xref="InterPro:IPR003423"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ45"
FT                   /inference="similar to sequence:UniProt:Q03027"
FT                   /protein_id="CAQ80812.1"
FT                   /translation="MTKTNRSRAFFLVGLFAAWQPMSHASELSALINEALKNNYQILNS
FT                   KYEVESSEFDQSISGAFFFPTINANANTTWNDSEVDSSTPSNNEYNSYGYRVSVSQTIL
FT                   DMSKIRSYQESGIDLQINKLKHDKIVNDIIIQVVENYFSYLKYHSQKKATDAQFRSSEA
FT                   RLKQISRNNELGNLPKTDVYETQAQKESTYKQLADIRKRINLALVQLQSTTQAPIRPSY
FT                   DVKLNNQYAEIDYYEKSTLEKNLIGSNYDIAIAKSNLDKSKRSLTQSRSDFYPTLSASA
FT                   NYEYTDSNFDSSRTDDATYALTVDIPIVNGGSDYYDYQKSKTKINQFSSQYDQAVNDNR
FT                   VNFEELIYNINTNVESLAILKSIIKSNYLVYKGNQSAFKLGTKTLTDLLNSESDLYDNI
FT                   REYHTNQYDYIINMTKLYALFGAVDLVSIEEISNRMEPISDTFDISILERFTSEGVK"
FT   sig_peptide     82627..82701
FT                   /locus_tag="VSAL_II0058"
FT   misc_feature    82708..83271
FT                   /locus_tag="VSAL_II0058"
FT                   /note="HMMPfam hit to PF02321, Outer membrane efflux
FT                   protein, score 1.4e-23"
FT                   /inference="protein motif:HMMPfam:PF02321"
FT   misc_feature    83338..83889
FT                   /locus_tag="VSAL_II0058"
FT                   /note="HMMPfam hit to PF02321, Outer membrane efflux
FT                   protein, score 3.6e-28"
FT                   /inference="protein motif:HMMPfam:PF02321"
FT   CDS             83994..85577
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0059"
FT                   /old_locus_tag="TVS3501"
FT                   /product="putative type I toxin secretion system, membrane
FT                   transport protein"
FT                   /note="Similar to Pseudomonas fluorescens Zinc-protease
FT                   transporter AprD UniProt:O67993 (579 aa) fasta scores:
FT                   E()=5.1e-09, 22.770% id in 527 aa"
FT                   /db_xref="GOA:B6EQ46"
FT                   /db_xref="InterPro:IPR017940"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ46"
FT                   /inference="similar to sequence:UniProt:O67993"
FT                   /protein_id="CAQ80813.1"
FT                   /translation="MMNKLHYLPRLGFFDAFFLFASSLTTTLLGLVLPFSILIIFDRIL
FT                   PNNSSSSLYFIFAIILIAIFLDYKVKNLEEAMVSRIGNRFEKKITNQLFHAICHSNLSL
FT                   FTRLETGEYLERLTTIPGLKSFFSGDLIRSAINAFTCLITLLVISLINPGAGVILTLSS
FT                   LFLLLISLHLSKTKIALMEKKSDIEGITNSKVIEIISYPLDIKSRSMEYRLENLMETMV
FT                   NEREHHTTEFEKQESRFNLTLNLIQQLAVTFTVVSSAMAVINLDISQGVMAAIILLTNR
FT                   YFAPYQQTMRTISQWRVNKSYIQRLNDILSMEESQQRTTAPQPTPRVLSYHGSKDYHFT
FT                   AEKISIVSGPSGSGKSSIVKAFTNKPLAQEYRLSINGLNADNYYQSETISNVVLVDKHS
FT                   TFVDGTIIDNITCFRPQLHKAAYSLCEALSIKSDIDDLKLGFYTDITTTGIKPFSRKVH
FT                   FALLIVRALLSNKKVILIDDFDLVFDDDFSLNLLSCLRPRIQSYLFVIVSNKIKDTDIK
FT                   IQHTPINEVA"
FT   misc_feature    order(84048..84116,84144..84197,84408..84476)
FT                   /locus_tag="VSAL_II0059"
FT   misc_feature    84627..84701
FT                   /locus_tag="VSAL_II0059"
FT                   /note="PS00179 Aminoacyl-transfer RNA synthetases class-II
FT                   signature 1."
FT                   /inference="protein motif:ProSite:PS00179"
FT   misc_feature    85038..85061
FT                   /locus_tag="VSAL_II0059"
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS             85578..87731
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0060"
FT                   /old_locus_tag="TVS3502"
FT                   /product="putative type I toxin secretion
FT                   system,ATP-binding protein"
FT                   /note="Similar to Serratia marcescens Secretion protein
FT                   LipB UniProt:Q54456 (588 aa) fasta scores:
FT                   E()=5.4e-21,24.291% id in 564 aa"
FT                   /db_xref="GOA:B6EQ47"
FT                   /db_xref="InterPro:IPR017940"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ47"
FT                   /inference="similar to sequence:UniProt:Q54456"
FT                   /protein_id="CAQ80814.1"
FT                   /translation="MDTLIAFDEIQERLHHFKNGHLQTRYSENPLLLGLAYTLVTLEWE
FT                   GTPDILSDAFLSDSEHALSFNKTLTRLDYQCIESDITHADQFLELDCPSFISLQDQNYI
FT                   LLNFDDDILYLYDYENDITIESEAKGKISAKVCSISKYSRLFREPPPESQDKRNWIKHV
FT                   FYHYNNEFKSLALLSLLISLLGTLQPFFIMGVYTFALTAGSTSTLYWLASGAVVIAGME
FT                   YLFKKQRMTILNTSGQELARYISYQVISKLLWLPYALTSNAATSSQLARLKDIDQFRQL
FT                   VTAESSLSYFDLPFIFIFLIAIFIMSGSAAITVIIGIVIMILFCIYARYIYMQATSKSS
FT                   RANAMVSYQWNEVLSNVSSIQKLPLLSVIKSRFNSALTQRLQDSHHVSVTNAKIQQLGS
FT                   SFIQVIGTTTIVIAVTAVMAGDTNPGAMLAIIILVWKTLTPIMGIYNSLAKIDTIKAST
FT                   AQINALMSLDDDKSRIEKSPPIHQFSGELSINGLSHRYQGINKGLTNLSFAIKSGNKVS
FT                   VCAPSGSGKTTLMNILSGIEPRFQGRLLFDGYNVNQFNNFRFRNSICYVPFDMHLYHGT
FT                   VHANYTMYNGYVPPAFIDEMLNFLDLLPYLPQGKKTLLSADFLSTLPDGIQRKLTLAIG
FT                   IGYCRKRVVIMDEPFVGSEHENSKYLTSLFSEYLANSTVIFSTTSKSMVATSDQCLLLE
FT                   KDGSQKFYGAPDKVLQAAPVMLT"
FT   misc_feature    order(86097..86165,86193..86252,86436..86495,86505..86573,
FT                   86766..86834,86847..86915)
FT                   /locus_tag="VSAL_II0060"
FT   misc_feature    87114..87668
FT                   /locus_tag="VSAL_II0060"
FT                   /note="HMMPfam hit to PF00005, ABC transporter, score
FT                   5.8e-10"
FT                   /inference="protein motif:HMMPfam:PF00005"
FT   misc_feature    87135..87158
FT                   /locus_tag="VSAL_II0060"
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS             complement(87782..88576)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0061"
FT                   /old_locus_tag="TVS3503"
FT                   /product="exported glycosyl hydrolase, family 16"
FT                   /note="Similar to Bacillus sp Lichenase precursor Bga1
FT                   UniProt:Q45648 (276 aa) fasta scores: E()=9.2e-22, 36.538%
FT                   id in 260 aa"
FT                   /db_xref="GOA:B6EQ48"
FT                   /db_xref="InterPro:IPR013320"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ48"
FT                   /inference="similar to sequence:UniProt:Q45648"
FT                   /protein_id="CAQ80815.1"
FT                   /translation="MNKYDALLIVGLSSFTVEACDVDECEVSYFSESLKELNSDLFERA
FT                   HHWSNGFPFLNRWEAGAIGFSEKGMNIELSDEPQSNEQYKYRSGELRSRHFYGYGCFSI
FT                   EMKPISSPGIVTSFFLFSGKHDKYEGSNAKHNEIDIEFLGKNTHEIQFNFWTNNDEYLS
FT                   KNSVLIPLEFDASKDFHQYAMLWQRDSIQWFVDGEMRYEVQQSKDNPIPDMADSRLKIM
FT                   ANVWPVDDELSSWAGKVNVLNQPLNSTYRNLSFQPINACGTK"
FT   misc_feature    complement(87848..88429)
FT                   /locus_tag="VSAL_II0061"
FT                   /note="HMMPfam hit to PF00722, Glycosyl hydrolases
FT                   family,score 1.5e-35"
FT                   /inference="protein motif:HMMPfam:PF00722"
FT   misc_feature    complement(88136..88168)
FT                   /locus_tag="VSAL_II0061"
FT                   /note="PS01034 Glycosyl hydrolases family 16 active sites."
FT                   /inference="protein motif:ProSite:PS01034"
FT   sig_peptide     complement(88520..88576)
FT                   /locus_tag="VSAL_II0061"
FT   CDS             complement(88569..90053)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0062"
FT                   /old_locus_tag="TVS3504"
FT                   /product="membrane protein"
FT                   /db_xref="InterPro:IPR010916"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ49"
FT                   /protein_id="CAQ80816.1"
FT                   /translation="MMGLSRVWITLIGIVLSSFTISVTAETDSPSFYGKRSVAPNETLS
FT                   EQAAPTFQRRSIVMTPQIVEPEHLDERAVTDESTDLTPAFIQEDEGPHNFPIPLVLVEL
FT                   TRNEKLLAKKAQYYFDRNWNENTGFTDSVQGYHHVTMWDVASDISAQFSLEGLGLQSKE
FT                   FTHRKLKRLLTTLLEAPLYQGKLPNREYSTKTGKPSGRYSNTKSNGNGWSALDIGRLLI
FT                   WLHIIKQEKKELALLVDNIVSKWSLASSVHNKTLYGTKLRKQSEHYRQEGRLGYLQYAA
FT                   SGFALFGFDVSESYQKTDIDKVIIGGIPFYIDSRNMPFSTPDPYVLTRLELGEPTAWWD
FT                   QLDTIYTLHKAKEKQTERLWVFGEDAMNQTPWFAYNNIFFYGKSWLSTSAGGKPIEVFQ
FT                   VFSNKVAFGLSVIYDDEYAERLVENVIANSLYSRSVPTGIYSDGLTNTAHNINTNSMIL
FT                   SALLYKRKNNSAMLHTNTKLNNKAVTVLADIKESDE"
FT   misc_feature    complement(89976..90053)
FT                   /locus_tag="VSAL_II0062"
FT                   /note="PS00430 TonB-dependent receptor proteins signature
FT                   1."
FT                   /inference="protein motif:ProSite:PS00430"
FT   sig_peptide     complement(89979..90053)
FT                   /locus_tag="VSAL_II0062"
FT   misc_feature    complement(89979..90035)
FT                   /locus_tag="VSAL_II0062"
FT   CDS             90232..91932
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0063"
FT                   /old_locus_tag="TVS3505"
FT                   /product="putative type I secretion system, ATP-binding
FT                   protein"
FT                   /note="Similar to Yersinia ruckeri Putative ATP-binding
FT                   metalloprotease secretion protein UniProt:Q8VLR8 (580 aa)
FT                   fasta scores: E()=1.2e-60, 38.283% id in 559 aa"
FT                   /db_xref="GOA:B6EQ50"
FT                   /db_xref="InterPro:IPR017940"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ50"
FT                   /inference="similar to sequence:UniProt:Q8VLR8"
FT                   /protein_id="CAQ80817.1"
FT                   /translation="MFKDKLKKSLSETKRDVSFALLFSCAINFLVLTLPIYSLQLFDRV
FT                   LGSSSLDTLYALLFIAVFLLTAQAVIEYFRIALLQRSGLKLDVSISSIMLSESIRQSAI
FT                   SKNINKQGLQDLSEIRRFLLSPSSSAIFDMPWIPLFLGILFMLHPAIGLITLSGCVIFI
FT                   ILAIVMMHSAKESTIESNKVAAKTTLELNDYLRNASTLKAMGMAESIGKYWNKQNHKML
FT                   GLQWVVNSRIGQLLAISRYFRTILQVLILTIGVILALQQEIGTGAIIASSIIMGRVLSP
FT                   FEQAVNGWKSWFSAFKAYQRLKNFSFIEEYAAKTTLPNPKGDILFQNVGLKLPHKKEPV
FT                   LQNINFKLGHGNALAILGNSGSGKSTLASLLMGIHAPSVGSIKIDGAAIHLWPEKQFGQ
FT                   HIGYLPQQVGLLSGTIAENICRFTEATDEDIIAAARLTCIHKLIISLPQGYDTYLEEGG
FT                   SSQLSGGQKQRIALARAIFSNPSILVLDEPNSNLDPEGEIALAIVLQYCKENKITVIMI
FT                   SHRPGFLRQMDWVISLKEGQVQKAGPSKLFLEEMSAIDNPNSVTVPKTA"
FT   sig_peptide     90232..90330
FT                   /locus_tag="VSAL_II0063"
FT   misc_feature    order(90280..90348,90391..90459,90598..90666,90679..90747,
FT                   90973..91041)
FT                   /locus_tag="VSAL_II0063"
FT   misc_feature    91282..91839
FT                   /locus_tag="VSAL_II0063"
FT                   /note="HMMPfam hit to PF00005, ABC transporter, score
FT                   1.9e-56"
FT                   /inference="protein motif:HMMPfam:PF00005"
FT   misc_feature    91303..91326
FT                   /locus_tag="VSAL_II0063"
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    91615..91659
FT                   /locus_tag="VSAL_II0063"
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:ProSite:PS00211"
FT   CDS             91947..93236
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0064"
FT                   /old_locus_tag="TVS3506"
FT                   /product="putative type I secretion protein, HlyD family"
FT                   /note="Similar to Rhizobium meliloti Membrane fusion
FT                   protein Expd2 UniProt:O05198 (473 aa) fasta scores:
FT                   E()=1.1e-33, 28.538% id in 424 aa"
FT                   /db_xref="GOA:B6EQ51"
FT                   /db_xref="InterPro:IPR010129"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ51"
FT                   /inference="similar to sequence:UniProt:O05198"
FT                   /protein_id="CAQ80818.1"
FT                   /translation="MTQFSTTRIITLCSAFILLTIGGFVWWATTAQLSSASIANGSLIV
FT                   ESQRKKIQHLQGGWVKAIHVTEGQHVEKGDLLIELANTKADSDYYRLMLRSISLKATIE
FT                   RLQAELSDNNIVSWTEEYHDEANSADVMNILNNQTLQFQQFLLRNELRTNQYTQNKEQL
FT                   TEQIRGSKSQLKSIKRQLQLVSKEINMMKGLVKKGYVSQTKMFEIQRHQASIESQREEL
FT                   QTKINVSTRQLTSLKQDFEAKDIELKQSLSSQSNQLEKEWLDTNQALITALDVRSRIKV
FT                   RSEHTGTIVGLNIHSIGGVVNPGDIIMEIVPNNEQLIVQAIIKPEDIDVVRTGQTAKVR
FT                   LNAYNVRKTPPITGTVIYVAADRLNKKGEKESGYLVKVQLLQEEITKLTNVELYPGMPT
FT                   DVLILLENRTLWDYFTAPLFNSYYKAFREQ"
FT   sig_peptide     91947..92063
FT                   /locus_tag="VSAL_II0064"
FT   misc_feature    91971..92039
FT                   /locus_tag="VSAL_II0064"
FT   misc_feature    92088..93023
FT                   /locus_tag="VSAL_II0064"
FT                   /note="HMMPfam hit to PF00529, HlyD family secretion
FT                   protein, score 4e-27"
FT                   /inference="protein motif:HMMPfam:PF00529"
FT   CDS             93246..93488
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0065"
FT                   /old_locus_tag="TVS3507"
FT                   /product="membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ52"
FT                   /protein_id="CAQ80819.1"
FT                   /translation="MIFWLSFYFFFFALTAFIGYRKGNLIAGILLGYVLGPVGLCLILL
FT                   SKNRLKLACPHCQALIHKHSYFCPNCDNKVLHALT"
FT   misc_feature    order(93249..93302,93315..93383)
FT                   /locus_tag="VSAL_II0065"
FT   CDS             93524..94282
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0066"
FT                   /old_locus_tag="TVS3508"
FT                   /product="membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ53"
FT                   /protein_id="CAQ80820.1"
FT                   /translation="MIKHTKKLQIFLMFLIACLFISGMTLLSLSSSINNKNETIQRLTD
FT                   DLIAEQLLSSSLTDYDNVIIELQSKNDTLRRDLSITSETLVEKNLTINQLKEQLATERR
FT                   KLARYKSSYNKNLKSRLANEKKKLNTQLDKERVALQSQENELEQQRVELEKLKNTPPPE
FT                   KTVTAADQKAIDEERVEELMKKFDAYQVDLSVENQCDKDYLYRYNEAKSTLSHIRTYLQ
FT                   KNQMDSNYYHFVIANDTSITAQNRKLCLGD"
FT   sig_peptide     93524..93628
FT                   /locus_tag="VSAL_II0066"
FT   misc_feature    93545..93577
FT                   /locus_tag="VSAL_II0066"
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   misc_feature    93551..93619
FT                   /locus_tag="VSAL_II0066"
FT   CDS             complement(94418..94579)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0067"
FT                   /old_locus_tag="TVS3509"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ54"
FT                   /protein_id="CAQ80821.1"
FT                   /translation="MMDSGLKDTYEASNIDTSNLNGYTFANSTGDEVTIWSDCDEDQIT
FT                   IADPNEIA"
FT   CDS             complement(94576..94767)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0068"
FT                   /old_locus_tag="TVS3510"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ55"
FT                   /protein_id="CAQ80822.1"
FT                   /translation="MTQTAYQEIEGVVVNTSNTELKIALDKILVNDSAGEANGQFVCSG
FT                   VETLNIDGSHWQLTGIPR"
FT   repeat_region   complement(94804..97020)
FT                   /note="VSa2"
FT   repeat_region   complement(94804..94827)
FT                   /note="IR of VSa2"
FT   CDS             complement(94820..96307)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0069"
FT                   /old_locus_tag="TVSb0073"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR004291"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ56"
FT                   /protein_id="CAQ80823.1"
FT                   /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS
FT                   ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC
FT                   CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK
FT                   GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL
FT                   HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGN
FT                   HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKGKTGSADWVLS
FT                   KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT
FT                   LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA
FT                   KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV"
FT   CDS             complement(96379..96726)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0070"
FT                   /old_locus_tag="TVS3513"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR008878"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ57"
FT                   /protein_id="CAQ80824.1"
FT                   /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI
FT                   FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL
FT                   GHQLVHYQTTL"
FT   misc_feature    complement(96385..96711)
FT                   /locus_tag="VSAL_II0070"
FT                   /note="HMMPfam hit to PF05717, IS66 Orf2 like protein,score
FT                   1.4e-31"
FT                   /inference="protein motif:HMMPfam:PF05717"
FT   CDS             complement(join(96723..96773,96775..96939))
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0071"
FT                   /old_locus_tag="TVS3514"
FT                   /product="transposase (pseudogene)"
FT                   /note="Similar to Pseudoalteromonas haloplanktis (strain
FT                   TAC 125) putative orphan protein putative transposase.
FT                   UniProt:Q3IIG2 (EMBL:CR954246) (99 aa) fasta scores:
FT                   E()=0.037, 36.000% id in 50 aa. CDS contains a frameshift
FT                   and a 40 aa residue deletion after codon 55"
FT                   /db_xref="PSEUDO:CAQ80825.1"
FT                   /inference="similar to sequence:UniProt:Q3IIG2"
FT   repeat_region   complement(96997..97020)
FT                   /note="IR of VSa2"
FT   CDS             97024..97581
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0072"
FT                   /old_locus_tag="TVS3515"
FT                   /product="hypothetical protein (fragment)"
FT                   /note="Similar to central part of Photobacterium profundum
FT                   Hypothetical nitrate reductase large subunit UniProt:Q6LP69
FT                   (898 aa) fasta scores: E()=5.8e-11, 35.252% id in 139 aa.
FT                   CDS is truncated by the insertion of the upstream IS
FT                   element and subsequent recombination events. The CDS also
FT                   appears to be truncated at the C-terminus. The sequence has
FT                   been checked and is believed to be correct"
FT                   /inference="similar to sequence:UniProt:Q6LP69"
FT   CDS             complement(97685..99019)
FT                   /transl_table=11
FT                   /gene="astB"
FT                   /locus_tag="VSAL_II0073"
FT                   /old_locus_tag="TVS3516"
FT                   /product="succinylarginine dihydrolase"
FT                   /EC_number="3.-.-.-"
FT                   /db_xref="GOA:B6EQ59"
FT                   /db_xref="InterPro:IPR007079"
FT                   /db_xref="UniProtKB/Swiss-Prot:B6EQ59"
FT                   /experiment="The expressed protein is found to be exported
FT                   (extracellular) by Aliivibrio salmonicida"
FT                   /protein_id="CAQ80827.1"
FT                   /translation="MKAVEANFDGLVGPTHNYSGLSVGNIASKNNKAGASNPKQAVKQG
FT                   LEKMKALHDMGFVQGVLAPQERPDIATLRRLGFSGSDANVLQQSHQYSPQLLAACSSAS
FT                   SMWTANAATVSPSSDTADGKVHFTPANLINKFHRSIEDEVTGNILKATFADEKHFSHHE
FT                   ALPHSDYFGDEGAANHTRFCNEYGEQGVEFFVFGKSAFNDRYPAPKKYPARQTLEASEA
FT                   IARTHGLRDKFTVFAQQNPDVIDQGVFHNDVIAVGNKNTLFCHQQAFLNQEQVKSDLSA
FT                   SYGSGFNVIEVPTDKVSLQDAVETYLFNSQLVTKSDGKTLIILPQHCRENPRVWAYLNE
FT                   LVEQKRGIDELHTFDLKQSMQNGGGPACLRLRVVLNEAEQQAVNQQTLMNDMLFSTLNA
FT                   WADKHYRDRIEDKDLADPQLLLESRAALDELTQIMKLGSVYPFQR"
FT   misc_feature    complement(97688..99019)
FT                   /gene="astB"
FT                   /locus_tag="VSAL_II0073"
FT                   /note="HMMPfam hit to PF04996, Succinylarginine
FT                   dihydrolase, score 7.5e-277"
FT                   /inference="protein motif:HMMPfam:PF04996"
FT   CDS             99366..100550
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0074"
FT                   /old_locus_tag="TVS3517"
FT                   /product="membrane protein"
FT                   /note="Expression may be regulated by Fur"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ60"
FT                   /protein_id="CAQ80828.1"
FT                   /translation="MMTTNSFSQSFSFSQFSLQHKRLLLPITLLALVAAETTRTITVTT
FT                   LSDAFWAVSTYVAFTLVIYHYLSNIMGKTNRITALYNKSRTNQVVFSSLLGALPGCGGA
FT                   IVVTTQYISGKVGFGSVVAVLTATMGDAAFLLIAAQPKVGFGVMALGVVVGAVSGMIVN
FT                   ALHKDDFLRPEAKEIVEPKRDIPCLQIKAINLQGAFWKWVLVPATVVAVLGSFQVDINQ
FT                   LLHVPEHTIEWIGAALAIGSMLLWSLTKEISDYQSTVSEDNKCVTSHPIQKAAQDTNFV
FT                   SAWVIVAFLIFELTTYFSGVDLHTVFLGYGMWMPLIGLAIGLLPGCGPQILVTSLYLSG
FT                   AMPMSAQLSNAISNDGDALFPAIALAPKAAMVATFYSAVPAFVVGYGYYFLFEM"
FT   sig_peptide     99366..99467
FT                   /locus_tag="VSAL_II0074"
FT   misc_feature    order(99432..99500,99510..99569,99630..99698,99711..99779,
FT                   99792..99860,100050..100109,100200..100268,100311..100379,
FT                   100473..100541)
FT                   /locus_tag="VSAL_II0074"
FT   CDS             complement(100746..101366)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0075"
FT                   /old_locus_tag="TVS3518"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ61"
FT                   /protein_id="CAQ80829.1"
FT                   /translation="MSTNKAILYYVYDPMCSWCWGYKPIWEKIKQTISKDVDIVYVLGG
FT                   LAPDSDEPMPQEMQTQIASYWQKIENYLGTTFNHEFWAQNTPRRSTYPSCRAILAARSQ
FT                   GAEQAMLESIQHAYYLNAKNPSDNEVLIECARNIGLNVAQFESALFSPEVHQMLLDEIA
FT                   FSRSIGRRGFPSLFLKQGEELTDLPIDYEKSEGTVALLKSCLS"
FT   CDS             101509..102360
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0076"
FT                   /old_locus_tag="TVS3519"
FT                   /product="integral membrane protein"
FT                   /db_xref="GOA:B6EQ62"
FT                   /db_xref="InterPro:IPR000620"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ62"
FT                   /protein_id="CAQ80830.1"
FT                   /translation="MYTFFGSLAFVIWGLVPIYFHQIGNIDPALILANRIFWSAAILMI
FT                   ILFIKPTLLDRSQCTKKNITLATVAGVFMNLSWVGFVYATTINNIMAASLAFYITPVLV
FT                   FFMGFMFFKETIKLPQKMALVLMVLAIVAYVLLDKQLPLLSLGISLFFASYIATKKLIK
FT                   LNTFGGIFFEHIVFAPLALWYIATHSSDITLMDWGTLMGTAPLQLIPILLLSVSLLKTP
FT                   LSKISLLQYIEPTFHLALAVWIYHEPISNGQKYALILVILSIMVSSIKTRKSTPKDAIN
FT                   KS"
FT   misc_feature    order(101518..101577,101596..101655,101698..101757,
FT                   101776..101844,101872..101940,102001..102069,
FT                   102097..102165,102184..102243,102271..102315)
FT                   /locus_tag="VSAL_II0076"
FT   misc_feature    101539..101916
FT                   /locus_tag="VSAL_II0076"
FT                   /note="HMMPfam hit to PF00892, Integral membrane protein
FT                   DUF6, score 7.5e-06"
FT                   /inference="protein motif:HMMPfam:PF00892"
FT   CDS             complement(102347..103216)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0077"
FT                   /old_locus_tag="TVS3520"
FT                   /product="HTH-type transcriptional regulator, AraC-family"
FT                   /db_xref="GOA:B6EQ63"
FT                   /db_xref="InterPro:IPR018060"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ63"
FT                   /protein_id="CAQ80831.1"
FT                   /translation="MSRQHISRINDVLFYIHQDISQELAVKELADVAAYSEQHFHRIFK
FT                   QVVGESIHQYIRRTRMEYAANQLMFDTTSTVLDIANTCGFSSLSSFSRAFKVTFDMSPG
FT                   EWRKHDLQISDKPYLKDPEIAAGYLAVADRDLPPPKIIEVPELLAAYVRHDGYNRSIRN
FT                   AWLILKAWANSENRDFSTQFGLHHSNPAWVDLNKCRYVACIAIDKPLKYRGVVNQMVIP
FT                   GGLHAVFRLHGVYGQLLPQISTVLEKWLPASGFKLRSTPAFVRYHQNHFLNENEQFELD
FT                   FHLPISFY"
FT   misc_feature    complement(102356..102808)
FT                   /locus_tag="VSAL_II0077"
FT                   /note="HMMPfam hit to PF06445, Bacterial transcription
FT                   activator, effect, score 6e-34"
FT                   /inference="protein motif:HMMPfam:PF06445"
FT   misc_feature    complement(102893..103027)
FT                   /locus_tag="VSAL_II0077"
FT                   /note="HMMPfam hit to PF00165, Bacterial regulatory
FT                   helix-turn-helix pro, score 1.9e-10"
FT                   /inference="protein motif:HMMPfam:PF00165"
FT   misc_feature    complement(102908..103039)
FT                   /locus_tag="VSAL_II0077"
FT                   /note="PS00041 Bacterial regulatory proteins, araC family
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00041"
FT   misc_feature    complement(103046..103186)
FT                   /locus_tag="VSAL_II0077"
FT                   /note="HMMPfam hit to PF00165, Bacterial regulatory
FT                   helix-turn-helix pro, score 9.9e-12"
FT                   /inference="protein motif:HMMPfam:PF00165"
FT   CDS             103330..104484
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0078"
FT                   /old_locus_tag="TVS3521"
FT                   /product="putative aminotransferase"
FT                   /db_xref="GOA:B6EQ64"
FT                   /db_xref="InterPro:IPR015422"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ64"
FT                   /protein_id="CAQ80832.1"
FT                   /translation="MEIAYSLQQIQSSYIREILAAATDKNVISLAGGLPDQETFPIDLM
FT                   KPTLESLSDMPEVFQYGATAGYGPLLALLTETYQLPDTHMPMICTGSQQGLDLIARAYV
FT                   NPNDTVVMEAPSYLGAMQVFGLVQANIATVSQTDFGPNLEELEQCFIQDSPKMFYAVPD
FT                   FHNPTGVCWSLETRKKVAELCIQYKVAFIEDAPYRELRFTGEVLPMVSTFCPQDSIVLR
FT                   SFSKIASPGLRIGAVTGKISYLEPLIKVKQGADLHSSVPMQALLVGLLKHEKFEQHMER
FT                   IQTLYKERYDVLFAELKKQLPSSCELKPVDGGMFIWLSLPDCDTFELAKTLIGNGVAVV
FT                   PSPVFYPNPENSPAALRLNFTNAKPKELVEAVTRLAKVLNKTLN"
FT   misc_feature    103402..104454
FT                   /locus_tag="VSAL_II0078"
FT                   /note="HMMPfam hit to PF00155, Aminotransferase class I and
FT                   II, score 2.6e-09"
FT                   /inference="protein motif:HMMPfam:PF00155"
FT   CDS             104527..105651
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0079"
FT                   /old_locus_tag="TVS3522"
FT                   /product="zinc carboxypeptidase"
FT                   /note="Expression may be stress-induced"
FT                   /db_xref="GOA:B6EQ65"
FT                   /db_xref="InterPro:IPR000834"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ65"
FT                   /protein_id="CAQ80833.1"
FT                   /translation="MKIFSNFESGNIHVVAANTPDDIQLTIPADNQTEIAQWFHFRLES
FT                   QPQQQHSFKILGLAKSAYPEGWQDYDVVASYDREEWFRIPTEFDGDTLSFNVMPEYRSM
FT                   YFAYFAPYSYDRHQDLLHGAQTHHSCQLETLGVTLDNNDISILTIGEPEEGKKNIWITG
FT                   RQHPGETMAEWFIEGLLSRLLDETDTVGRALLDTAVFHIVPNMNPDGSIRGHLRTNGIG
FT                   VNLNREWQTPSMERSPEVFLVRERMLATGVDMFLDIHGDEAIPYNFVAGGEGIPSYNER
FT                   IAKLETTFKQALLVITPEFQDDIGYDKDAPGTANLTVGSNWVGEQFKCLSYTVEMPFKD
FT                   HISHADELYGWSPERSVAFGQDVLAAVWATVGEL"
FT   misc_feature    104875..105624
FT                   /locus_tag="VSAL_II0079"
FT                   /note="HMMPfam hit to PF00246, Zinc carboxypeptidase,score
FT                   1.7e-58"
FT                   /inference="protein motif:HMMPfam:PF00246"
FT   repeat_region   105712..105866
FT                   /note="VSa1"
FT   repeat_region   105712..105730
FT                   /note="IR of VSa1"
FT   repeat_region   complement(105867..108181)
FT                   /note="VSa2"
FT   repeat_region   complement(105867..105890)
FT                   /note="IR of VSa2"
FT   CDS             complement(105883..107370)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0080"
FT                   /old_locus_tag="TVS3523"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR004291"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGR2"
FT                   /protein_id="CAQ80834.1"
FT                   /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS
FT                   ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC
FT                   CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK
FT                   GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL
FT                   HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY
FT                   HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKGKTGSADWVLS
FT                   KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT
FT                   LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA
FT                   KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV"
FT   CDS             complement(107442..107789)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0081"
FT                   /old_locus_tag="TVSb0074"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR008878"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN4"
FT                   /protein_id="CAQ80835.1"
FT                   /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI
FT                   FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL
FT                   GHQPVHYQTTL"
FT   CDS             complement(join(107786..107887,107891..108100))
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0082"
FT                   /old_locus_tag="TVS3526"
FT                   /product="transposase (pseudogene)"
FT                   /note="Similar to Pseudoalteromonas haloplanktis Putative
FT                   orphan protein; putative transposase UniProt:Q3IIG2 (99 aa)
FT                   fasta scores: E()=2.2e-06, 30.5% id in 95 aa. CDS contains
FT                   a translational stop codon (TAA) after codon 70"
FT                   /db_xref="PSEUDO:CAQ80836.1"
FT                   /inference="similar to sequence:UniProt:Q3IIG2"
FT   repeat_region   complement(108158..108181)
FT                   /note="IR of VSa2"
FT   CDS             complement(108268..109188)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0083"
FT                   /old_locus_tag="TVS3527"
FT                   /product="putative permease"
FT                   /db_xref="InterPro:IPR005524"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ69"
FT                   /protein_id="CAQ80837.1"
FT                   /translation="MFTITQDMVMDTLNMFAFLAAELTVLFLLISYLVGVLQEYIPPAK
FT                   IQRILSGKNGRGYIVAGLLGAITPFCSCSTIPFLKGLLRAKAGFGTMMVFLFASPLLNP
FT                   IIIGLFAVTFGLKVTLFYFAIAMGVSIIAGYALEKLGFEKYVKETAYITPEPKSCGSTC
FT                   GSAKKAPQSKWVKIWHSTWTDFKKVLPYLIGGIALGSMIYGFMPTEFVARIASENNPFA
FT                   IPVAAVIGIPLYIRAEAVIPLSAALAAKGMSLGAVMALIIGSAGASLTEVILLKSIFKN
FT                   QMIIAFLVVILGMAVSAGYLYQFIF"
FT   misc_feature    complement(order(108274..108342,108367..108435,
FT                   108478..108531,108568..108627,108778..108837,
FT                   108856..108924,108952..109020,109078..109146))
FT                   /locus_tag="VSAL_II0083"
FT   misc_feature    complement(108277..109167)
FT                   /locus_tag="VSAL_II0083"
FT                   /note="HMMPfam hit to PF03773, Predicted permease, score
FT                   1.8e-40"
FT                   /inference="protein motif:HMMPfam:PF03773"
FT   repeat_region   109247..110685
FT                   /note="VSa9"
FT   CDS             109326..110519
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0084"
FT                   /old_locus_tag="TVS3528"
FT                   /product="transposase"
FT                   /db_xref="GOA:B6EQ70"
FT                   /db_xref="InterPro:IPR007069"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ70"
FT                   /protein_id="CAQ80838.1"
FT                   /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRSVVIENVTKMLSCGTA
FT                   AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT
FT                   LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL
FT                   SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDW
FT                   SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD
FT                   HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE
FT                   AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA"
FT   CDS             110722..110889
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0085"
FT                   /old_locus_tag="TVS3530"
FT                   /product="putative membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ71"
FT                   /protein_id="CAQ80839.1"
FT                   /translation="MYGIGLILSPATGGLSVLLVGGAGFVWGIYGGDISNEFGSAVEEV
FT                   SFDLYDRLFD"
FT   misc_feature    110740..110808
FT                   /locus_tag="VSAL_II0085"
FT   CDS             110942..111295
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0086"
FT                   /old_locus_tag="TVS3531"
FT                   /product="putative membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ72"
FT                   /protein_id="CAQ80840.1"
FT                   /translation="MFLSIFLTVYISVKNRKIKEKLINQVADCAPLVFRERTINSMRNV
FT                   AHNWLIGSMFPSIWFMHPILMFLCSLSNVEIITWRKKVKILLGNTYAICILSLNLSFTG
FT                   LIYLVIRTFVIPY"
FT   misc_feature    order(111089..111157,111218..111286)
FT                   /locus_tag="VSAL_II0086"
FT   CDS             111425..111577
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0087"
FT                   /old_locus_tag="TVS3532"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ73"
FT                   /protein_id="CAQ80841.1"
FT                   /translation="MLEEAYEFFELDLFFEKIESSIDKDIPNDIEDYINKSIFNNFNIK
FT                   SNFNG"
FT   CDS             111582..111908
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0088"
FT                   /old_locus_tag="TVS3533"
FT                   /product="putative membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ74"
FT                   /protein_id="CAQ80842.1"
FT                   /translation="MLELKPIMGLIFFTWILIYFYHLVVYSLGDKKNISQLVNDLAKDP
FT                   ELFKKKHRISMVSIGAGGLFSYFCIVYPFIRHRRRNKKVTFDLFMWLNWLCFMLSAFFY
FT                   IRSF"
FT   misc_feature    order(111600..111668,111738..111806,111843..111896)
FT                   /locus_tag="VSAL_II0088"
FT   CDS             complement(112006..112983)
FT                   /transl_table=11
FT                   /gene="fruR"
FT                   /locus_tag="VSAL_II0089"
FT                   /old_locus_tag="TVS3534"
FT                   /product="fructose repressor"
FT                   /db_xref="GOA:B6EQ75"
FT                   /db_xref="InterPro:IPR012781"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ75"
FT                   /protein_id="CAQ80843.1"
FT                   /translation="MTLDQIAKLAGVSKTTASYVINGKAQKYRISEKTQLKVMAVVDEH
FT                   NYRPDHAASALRAGRSRSFGLIIPDLENTSYAKLAKLLEFNSRKAGYQILIGCSDDDPE
FT                   TEMNVAHALISRRIDALFVASCLVDGSDYYLKIQERGTPIIAIDRSLDDEHFCCVISED
FT                   FDAAYELTQSVINENVKSIGLIGALPDLNISRQRHSGFDAKVTEKGLSSITGYGEHFNS
FT                   ESGKAIFEQWIKEDTVPDAIITTSYILLESILDVLIEKPELMGTVKLGTFGDNRLLDFL
FT                   PIKINSLPQQFELIADSALALGLNASAKRYQAGIELIPRKIVIR"
FT   misc_feature    complement(112009..112803)
FT                   /gene="fruR"
FT                   /locus_tag="VSAL_II0089"
FT                   /note="HMMPfam hit to PF00532, Periplasmic binding proteins
FT                   and sugar b, score 0.0013"
FT                   /inference="protein motif:HMMPfam:PF00532"
FT   misc_feature    complement(112906..112983)
FT                   /gene="fruR"
FT                   /locus_tag="VSAL_II0089"
FT                   /note="HMMPfam hit to PF00356, Bacterial regulatory
FT                   proteins, lacI fami, score 1.1e-08"
FT                   /inference="protein motif:HMMPfam:PF00356"
FT   misc_feature    complement(112918..112983)
FT                   /gene="fruR"
FT                   /locus_tag="VSAL_II0089"
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1886.000, SD 5.61 at aa 12-33, sequence
FT                   MTLDQIAKLAGVSKTTASYVIN"
FT   CDS             113254..114390
FT                   /transl_table=11
FT                   /gene="fruB"
FT                   /locus_tag="VSAL_II0090"
FT                   /old_locus_tag="TVS3535"
FT                   /product="PTS system, fructose-specific IIA/FPR component"
FT                   /EC_number="2.7.1.-"
FT                   /db_xref="GOA:B6EQ76"
FT                   /db_xref="InterPro:IPR005698"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ76"
FT                   /protein_id="CAQ80844.1"
FT                   /translation="MLTLTKNDITLQQAAADKTTAIKAIAKQLTEKGLVAEKYVEGMLN
FT                   REQQNSTFLGNGIAIPHGTTDTRELVNKTGVAVHHFPQGVNWGDGNVVYVAIGIAAKSD
FT                   EHLGILKQLTKVLSADGVEEKLKQAKSEADIIALLNGEVQFEADFDASLIKLLFPASDM
FT                   IQMSAVAGGLLRNSGNAENQFVAELVTKEPTHLGNGLWLVSTDKGVKRSGMSIVTTANG
FT                   CEFNGLAVKGLIAIASCNASHKSFLSIISKMVFEQKQDQLLSANSEQLLAMFATSSEEI
FT                   VAEVSADNTAVFTIKNAHGLHARPGAMLVSEAKKYESKITVLNLNGDGKSANAKSLMKV
FT                   IALGVKHGHELQFTADGVDAKEALVGIGAAIESGLGEG"
FT   misc_feature    113257..113679
FT                   /gene="fruB"
FT                   /locus_tag="VSAL_II0090"
FT                   /note="HMMPfam hit to PF00359,Phosphoenolpyruvate-dependent
FT                   sugar phosph, score 7.4e-59"
FT                   /inference="protein motif:HMMPfam:PF00359"
FT   misc_feature    113392..113442
FT                   /gene="fruB"
FT                   /locus_tag="VSAL_II0090"
FT                   /note="PS00372 PTS EIIA domains phosphorylation site
FT                   signature 2."
FT                   /inference="protein motif:ProSite:PS00372"
FT   misc_feature    114121..114375
FT                   /gene="fruB"
FT                   /locus_tag="VSAL_II0090"
FT                   /note="HMMPfam hit to PF00381, PTS HPr component
FT                   phosphorylation site, score 6e-35"
FT                   /inference="protein motif:HMMPfam:PF00381"
FT   misc_feature    114151..114174
FT                   /gene="fruB"
FT                   /locus_tag="VSAL_II0090"
FT                   /note="PS00369 PTS HPR component histidine phosphorylation
FT                   site signature."
FT                   /inference="protein motif:ProSite:PS00369"
FT   misc_feature    114238..114285
FT                   /gene="fruB"
FT                   /locus_tag="VSAL_II0090"
FT                   /note="PS00589 PTS HPR component serine phosphorylation
FT                   site signature."
FT                   /inference="protein motif:ProSite:PS00589"
FT   CDS             114394..115371
FT                   /transl_table=11
FT                   /gene="fruK"
FT                   /locus_tag="VSAL_II0091"
FT                   /old_locus_tag="TVS3536"
FT                   /product="1-phosphofructokinase"
FT                   /EC_number="2.7.1.56"
FT                   /db_xref="GOA:B6EQ77"
FT                   /db_xref="InterPro:IPR017583"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ77"
FT                   /protein_id="CAQ80845.1"
FT                   /translation="MTSIQTNKVVTITLNPALDLTGSVDALSIGSVSLVSKGSLHAAGK
FT                   GVNVAKVLSDLGAEVTVTGFLGRDNEELFCQLFEEMNANDQFVRVDGATRINVKLVEQD
FT                   GRVSDINFPGVNVSEQAIAEFESRLFELAKTHEFFVLAGSLPQGVSPELCATWIEKLHQ
FT                   LGKKVMFDSSRAALAAGLDAHPWLIKPNDEELSEFVGRELNTPEACQQAAQDLADKGIE
FT                   NVVVSLGSKGVMWLGKNEEADASWIYSQPPKMNVVSTVGAGDTLVAGLCWGHVNQWERA
FT                   QILSFATALSALAVSQVGVGVPNVEDVKELQQQVTLHNPISSNV"
FT   misc_feature    114427..115314
FT                   /gene="fruK"
FT                   /locus_tag="VSAL_II0091"
FT                   /note="HMMPfam hit to PF00294, pfkB family carbohydrate
FT                   kinase, score 2.1e-55"
FT                   /inference="protein motif:HMMPfam:PF00294"
FT   misc_feature    114520..114594
FT                   /gene="fruK"
FT                   /locus_tag="VSAL_II0091"
FT                   /note="PS00583 pfkB family of carbohydrate kinases
FT                   signature 1."
FT                   /inference="protein motif:ProSite:PS00583"
FT   CDS             115402..117141
FT                   /transl_table=11
FT                   /gene="fruA"
FT                   /locus_tag="VSAL_II0092"
FT                   /old_locus_tag="TVS3537"
FT                   /product="PTS system, fructose-specific IIBC component"
FT                   /EC_number="2.7.1.69"
FT                   /db_xref="GOA:B6EQ78"
FT                   /db_xref="InterPro:IPR013014"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ78"
FT                   /protein_id="CAQ80846.1"
FT                   /translation="MKNIAIVTACPSGVANSIIAAGLLEQAAAKLNWKASIECQSSVLP
FT                   VDVLTQEIIDTVDAIIIATNTDIDTTRFVGKKVHQGSISDCTTNPQAWLENAVNTATEL
FT                   TASEVTTINEVVVDSNAVKKIVAITACPTGVAHTFMAAEALEEEGKRQGYFIKVETRGS
FT                   VGAKNQLTDQDIADADLVIIAADIEVPLERFNGKRLYRTSTGLALKKTEQEMNKAFAEA
FT                   TVFQASGKAQSSQAEESKGMYKHLMTGVSHMLPVVIAGGLLIALSFVFGIEAFKEPGTI
FT                   AATLIDIGGGAAFALMIPVLAGFIAFSIADRPGLAPGLIGGMLASSTGAGFLGGIAAGF
FT                   IAGYAAKFIADKVSLPQSMEALKPILIIPFVASLFTGLVMVYIVGGPVAGIMSALTEFL
FT                   NNMGSTNAVLLGVILGCMMCFDLGGPVNKAAYTFGVGLLASQTYGPMAAIMAAGMVPAL
FT                   GMGLATFLAKNKFEAGEREAGKASFVLGLCFISEGAIPFAAKDPMRVIPSCMAGGALTG
FT                   GLSMLFGAQLLAPHGGLFVLLIPNAITPVFMYLVAIAAGTAVTGFTYAFLKNKADAKEV
FT                   VAA"
FT   sig_peptide     115402..115461
FT                   /gene="fruA"
FT                   /locus_tag="VSAL_II0092"
FT   misc_feature    115408..115713
FT                   /gene="fruA"
FT                   /locus_tag="VSAL_II0092"
FT                   /note="HMMPfam hit to PF02379, PTS system, Fructose
FT                   specific IIB subuni, score 2.2e-10"
FT                   /inference="protein motif:HMMPfam:PF02379"
FT   misc_feature    115771..116076
FT                   /gene="fruA"
FT                   /locus_tag="VSAL_II0092"
FT                   /note="HMMPfam hit to PF02379, PTS system, Fructose
FT                   specific IIB subuni, score 2.4e-61"
FT                   /inference="protein motif:HMMPfam:PF02379"
FT   misc_feature    116140..116937
FT                   /gene="fruA"
FT                   /locus_tag="VSAL_II0092"
FT                   /note="HMMPfam hit to PF02378, Phosphotransferase
FT                   system,EIIC, score 1.6e-20"
FT                   /inference="protein motif:HMMPfam:PF02378"
FT   misc_feature    order(116149..116217,116260..116328,116365..116433,
FT                   116491..116559,116620..116673,116731..116799,
FT                   116923..116991,117034..117102)
FT                   /gene="fruA"
FT                   /locus_tag="VSAL_II0092"
FT   CDS             complement(117309..117767)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0093"
FT                   /old_locus_tag="TVS3538"
FT                   /product="putative exported protein"
FT                   /db_xref="GOA:B6EQ79"
FT                   /db_xref="InterPro:IPR011250"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ79"
FT                   /protein_id="CAQ80847.1"
FT                   /translation="MKRFIPLLLLGATTSAQATDTLHQIYIQPSLANLKIDGSHVDGLM
FT                   TQVGYNYHFAPMVALDLSYYMTESMDNVTSNNDSAAVDGASIAAKMYFPMSYYGSFYGK
FT                   MGLNRTNVEYKNTVGNQTMKQDSTTTKPYVAVGGVMKLYPSVTFNVEC"
FT   sig_peptide     complement(117714..117767)
FT                   /locus_tag="VSAL_II0093"
FT   CDS             117846..118418
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0094"
FT                   /old_locus_tag="TVS3539"
FT                   /product="membrane transport protein, LysE type (fragment)"
FT                   /note="Similar to Vibrio fischeri Threonine efflux protein
FT                   UniProt:Q5DYY8 (204 aa) fasta scores: E()=2.6e-51, 87.079%
FT                   id in 178 aa. The insertion of the downstream IS element
FT                   truncates the last 15 amino acid residues of the CDS. There
FT                   is an inframe translational stop codon 10 amino acid
FT                   residues further downstream within the IS element. The
FT                   extended CDS may therefore be expressed and functional"
FT                   /inference="similar to sequence:UniProt:Q5DYY8"
FT   misc_feature    117885..118418
FT                   /locus_tag="VSAL_II0094"
FT                   /note="HMMPfam hit to PF01810, LysE type translocator,score
FT                   1.4e-21"
FT                   /inference="protein motif:HMMPfam:PF01810"
FT   misc_feature    order(117975..118043,118071..118139,118200..118268,
FT                   118296..118364)
FT                   /locus_tag="VSAL_II0094"
FT   misc_feature    117993..118070
FT                   /locus_tag="VSAL_II0094"
FT                   /note="PS00107 Protein kinases ATP-binding region
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00107"
FT   repeat_region   order(118419..119218,120224..121740)
FT                   /note="VSa2"
FT   repeat_region   118419..118442
FT                   /note="IR of VSa2"
FT   CDS             118500..118814
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0095"
FT                   /old_locus_tag="TVS3540"
FT                   /product="transposase"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN3"
FT                   /protein_id="CAQ80849.1"
FT                   /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA
FT                   RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS
FT                   "
FT   CDS             118811..119158
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0096"
FT                   /old_locus_tag="TVS3541"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR008878"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN4"
FT                   /protein_id="CAQ80850.1"
FT                   /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI
FT                   FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL
FT                   GHQPVHYQTTL"
FT   misc_feature    118826..119152
FT                   /locus_tag="VSAL_II0096"
FT                   /note="HMMPfam hit to PF05717, IS66 Orf2 like protein,score
FT                   5.1e-32"
FT                   /inference="protein motif:HMMPfam:PF05717"
FT   repeat_region   119219..120223
FT                   /note="VSa6"
FT   repeat_region   119219..119237
FT                   /note="IR of VSa6"
FT   CDS             119315..120196
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0097"
FT                   /old_locus_tag="TVS3543"
FT                   /product="transposase"
FT                   /db_xref="GOA:B6EH02"
FT                   /db_xref="InterPro:IPR002559"
FT                   /db_xref="UniProtKB/TrEMBL:B6EH02"
FT                   /protein_id="CAQ80851.1"
FT                   /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC
FT                   MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK
FT                   GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS
FT                   LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE
FT                   ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI
FT                   KLSECEFELILA"
FT   misc_feature    119642..120008
FT                   /locus_tag="VSAL_II0097"
FT                   /note="HMMPfam hit to PF01609, Transposase DDE domain,score
FT                   1.2e-07"
FT                   /inference="protein motif:HMMPfam:PF01609"
FT   misc_feature    120085..120136
FT                   /locus_tag="VSAL_II0097"
FT   repeat_region   120205..120223
FT                   /note="IR of VSa6"
FT   CDS             120237..121724
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0098"
FT                   /old_locus_tag="TVS3544"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR004291"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ56"
FT                   /protein_id="CAQ80852.1"
FT                   /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS
FT                   ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC
FT                   CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK
FT                   GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL
FT                   HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGN
FT                   HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKGKTGSADWVLS
FT                   KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT
FT                   LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA
FT                   KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV"
FT   repeat_region   121717..121740
FT                   /note="IR of VSa2"
FT   CDS             complement(122303..123475)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0099"
FT                   /old_locus_tag="TVS3545"
FT                   /product="putative lipoprotein"
FT                   /note="Expression may be stress-induced"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ84"
FT                   /protein_id="CAQ80853.1"
FT                   /translation="MISSLFSRFAFIGSLTILGACSQSTTDANYLASESLPNYSQTSFQ
FT                   QYIDETKLWLADHRVFKSDNIEKELMVNLPFEIKPNKPNGKGVLLVHGLGDSPFSFIDV
FT                   AQHLADKGYLVRSILLPGHGSKVADLMLPSLEDWQNVVHHHTQLLKAQTDEVWLGGYST
FT                   GANLVTSEALKDDDIAGLLLFSPAFKPGSSTVKFAKIASYFLTWADQDPETNPIRYNSL
FT                   PMHGAAVYYDTAKIVQQDLKDKNYTKPVFMITSEGDRVIDTKFSTTVFETQFTNAKNHL
FT                   VWQGENVFPATNATTFSMNRPDLKIIDGSHMGLLFSPNNPEYGKKGVVRICSNGQTEEQ
FT                   ELACEEGADVWFSSYGIREEGKIFARLTYNPYFEQSMEILDSVMNVSASN"
FT   sig_peptide     complement(123392..123475)
FT                   /locus_tag="VSAL_II0099"
FT   misc_feature    complement(123413..123445)
FT                   /locus_tag="VSAL_II0099"
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   CDS             complement(123595..123861)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0100"
FT                   /old_locus_tag="TVS3546"
FT                   /product="putative membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ85"
FT                   /protein_id="CAQ80854.1"
FT                   /translation="MQQPHLKAIESEKVDIGTQQASKQTRITSYDFLDAMLAIHICIIL
FT                   GAIMDVSGFSRAYLYYFGCAGFGGISLGSTPTAMENMSTVAQK"
FT   misc_feature    complement(order(123625..123693,123697..123756))
FT                   /locus_tag="VSAL_II0100"
FT   CDS             complement(124530..125705)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0101"
FT                   /old_locus_tag="TVS3547"
FT                   /product="peptidase"
FT                   /note="Similar to Pseudomonas sp Carboxypeptidase G2
FT                   precursor Cpg2 UniProt:P06621 (415 aa) fasta scores:
FT                   E()=1.6e-11, 25.849% id in 383 aa"
FT                   /db_xref="GOA:B6EQ86"
FT                   /db_xref="InterPro:IPR011650"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ86"
FT                   /inference="similar to sequence:UniProt:P06621"
FT                   /protein_id="CAQ80855.1"
FT                   /translation="MHLFSHFLWVEWFYISFQYRRKIMTQVNQERLINHFLDIVQIDSE
FT                   SKNEKAIAKALAEQLGELGFTVTKLPVPEHVSNGFNIYARLEGELEGSIVFSSHMDTVT
FT                   PGNGIEPIIEDGVIRSKGNTVLGGDDKSGISAVMEAVRVIKENNHAHKTIELAFTVYEE
FT                   GGLHGSKNYDMSYIQSNHAIVLDSGGPIGTIITSAPGQQNLKVTITGRPAHAGLAPEEG
FT                   INALTVAADAIMNMTLARIDEETTANIGVVRGGQATNIVMPELYIEGEARSLDDVKLAK
FT                   QVEHMESTFKAAADKHGAQIEMISTRAYNAYKISDDNSHVASIKEAFESINISPFTKST
FT                   GGGSDANVFNEKGLTTVNLSTGMSKVHTTEEFIKVSDMVDITRFLTAYLTH"
FT   misc_feature    complement(124533..125423)
FT                   /locus_tag="VSAL_II0101"
FT                   /note="HMMPfam hit to PF01546, Peptidase family
FT                   M20/M25/M40, score 1.9e-07"
FT                   /inference="protein motif:HMMPfam:PF01546"
FT   misc_feature    complement(124812..125120)
FT                   /locus_tag="VSAL_II0101"
FT                   /note="HMMPfam hit to PF07687, Peptidase dimerisation
FT                   domain, score 2.3e-12"
FT                   /inference="protein motif:HMMPfam:PF07687"
FT   CDS             125864..127009
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0102"
FT                   /old_locus_tag="TVS3548"
FT                   /product="peptide methionine sulfoxide reductase"
FT                   /EC_number="1.8.4.11"
FT                   /db_xref="GOA:B6EQ87"
FT                   /db_xref="InterPro:IPR002579"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ87"
FT                   /experiment="The expressed protein is found to be exported
FT                   (extracellular) by Aliivibrio salmonicida"
FT                   /protein_id="CAQ80856.1"
FT                   /translation="MKYRLKITTIALLFIPFFAVMTSFFSTAEDMSTLKKGNYEVATLA
FT                   GGCFWCTESDLEKLDGVVDVVSGYSGGSLENPTYKQVSSGKSGHIEVIQVTFDPKIVSY
FT                   EQVLDQLFRHMDPTDSKGSFVDRGPQYRPAIFFHNEDQQVIAQEFMNAIDAAGIYPKPL
FT                   ATELIEFEKFWPAEDYHQDYYKNNPVRYKYYRYNSGRDQYLDAVFGEDRNENPKTLRQY
FT                   IDEKTMAQNVKPYNKPSDSEIKKMLTDQQYYVTQEEGTERPFNNKYWDNKAEGIYVDIV
FT                   SGEPLFSSTDKYKSGTGWPSFTKPINKAYIAEEDDFALFSKRTEIRSKFADSHLGHVFS
FT                   DGPKPTGLRYCMNSAAMRFVAKSDLEKEGYEEYLYLFNQSS"
FT   sig_peptide     125864..125947
FT                   /locus_tag="VSAL_II0102"
FT   misc_feature    125882..125950
FT                   /locus_tag="VSAL_II0102"
FT   misc_feature    125981..126454
FT                   /locus_tag="VSAL_II0102"
FT                   /note="HMMPfam hit to PF01625, Peptide methionine sulfoxide
FT                   reductase, score 8.6e-67"
FT                   /inference="protein motif:HMMPfam:PF01625"
FT   misc_feature    126581..126949
FT                   /locus_tag="VSAL_II0102"
FT                   /note="HMMPfam hit to PF01641, SelR domain, score 1.1e-76"
FT                   /inference="protein motif:HMMPfam:PF01641"
FT   CDS             complement(127079..127834)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0103"
FT                   /old_locus_tag="TVS3549"
FT                   /product="HTH-type transcriptional regulator, DeoR-family"
FT                   /db_xref="GOA:B6EQ88"
FT                   /db_xref="InterPro:IPR018356"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ88"
FT                   /protein_id="CAQ80857.1"
FT                   /translation="MIPAERQRTILSLLSHQEVISIVELIEHLDVSHMTIRRDIVKLES
FT                   LGKVISVSGGVQLTRTIHSELSHDSKIEQQTNEKAVIGTIAADLIPPNSTVYLDAGTTS
FT                   LELAHKISARDDLLIITNDFAIAAYLINHSECEIYHTGGKIDRNNQSAIGRKVVEFLLT
FT                   MNIDIAFISTSSWSLKGLSTPYEGKVDVKQAIAKSSQITYLISDSTKYGQVATFHALDI
FT                   ECIHGVITDNNLAESVVNDLEEKGINVIR"
FT   misc_feature    complement(127142..127609)
FT                   /locus_tag="VSAL_II0103"
FT                   /note="HMMPfam hit to PF00455, Bacterial regulatory
FT                   proteins, deoR family, score 7.3e-31"
FT                   /inference="protein motif:HMMPfam:PF00455"
FT   misc_feature    complement(127649..127819)
FT                   /locus_tag="VSAL_II0103"
FT                   /note="HMMPfam hit to PF08220, DeoR-like helix-turn-helix
FT                   domain, score 2.8e-12"
FT                   /inference="protein motif:HMMPfam:PF08220"
FT   misc_feature    complement(127664..127819)
FT                   /locus_tag="VSAL_II0103"
FT                   /note="HMMPfam hit to PF08279, HTH domain, score 1.6e-12"
FT                   /inference="protein motif:HMMPfam:PF08279"
FT   misc_feature    complement(127712..127777)
FT                   /locus_tag="VSAL_II0103"
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1205.000, SD 3.29 at aa 20-41, sequence
FT                   ISIVELIEHLDVSHMTIRRDIV"
FT   misc_feature    complement(127715..127819)
FT                   /locus_tag="VSAL_II0103"
FT                   /note="PS00894 Bacterial regulatory proteins, deoR family
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00894"
FT   CDS             128086..129027
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0104"
FT                   /old_locus_tag="TVS3550"
FT                   /product="putative 6-phosphogluconate dehydrogenase"
FT                   /note="Expression may be regulated by Fur"
FT                   /db_xref="GOA:B6EQ89"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ89"
FT                   /protein_id="CAQ80858.1"
FT                   /translation="MYPLLTNLLEGVMENQKAQSVGVIGLGSMGMGAANSCIRAGLDVY
FT                   GIDLNTHALEVLKNKGAKAVSTNVLEFADKLDAVLILVVNANQVNAVLFDSGFAAALKP
FT                   NTAIMVSATIAADDAKQIEAKLKEYQLTMLDAPVSGGAIKAEAGEMTIMASGSKEAFDK
FT                   LEPVLEATASKVYNIGEEIGLGATVKIIHQLLAGVHIAAGAEAMALAARANIPLDLMYD
FT                   VVTNAAGNSWMFENRMKHVVDGDYSPKSMVDIFVKDLNLVSDTAKDLQFPLPLSSTALN
FT                   MFVSASNEGFGKEDDSAVIKIFKGIDLPGVEK"
FT   misc_feature    128137..128625
FT                   /locus_tag="VSAL_II0104"
FT                   /note="HMMPfam hit to PF03446, NAD binding domain of
FT                   6-phosphogluconat, score 1.4e-52"
FT                   /inference="protein motif:HMMPfam:PF03446"
FT   misc_feature    128152..128187
FT                   /locus_tag="VSAL_II0104"
FT                   /note="PS00895 3-hydroxyisobutyrate dehydrogenase
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00895"
FT   CDS             129030..129362
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0105"
FT                   /old_locus_tag="TVS3551"
FT                   /product="hypothetical protein (fragment)"
FT                   /note="Similar to Escherichia coli Hypothetical protein
FT                   UniProt:Q849Y1 (421 aa) fasta scores: E()=2e-28, 72.072% id
FT                   in 111 aa. CDS is truncated by the insertion of the
FT                   downstream IS element and subsequent recombination events"
FT                   /inference="similar to sequence:UniProt:Q849Y1"
FT   repeat_region   complement(129363..130798)
FT                   /note="VSa9"
FT   CDS             complement(129529..130719)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0106"
FT                   /old_locus_tag="TVS3552"
FT                   /product="transposase"
FT                   /db_xref="GOA:B6EHE4"
FT                   /db_xref="InterPro:IPR007069"
FT                   /db_xref="UniProtKB/TrEMBL:B6EHE4"
FT                   /protein_id="CAQ80860.1"
FT                   /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA
FT                   AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT
FT                   LPNTLWPIFRHNRLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHLS
FT                   VTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDWS
FT                   RFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLDH
FT                   RTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIEA
FT                   EPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA"
FT   repeat_region   complement(130799..132237)
FT                   /note="VSa9"
FT   CDS             complement(130965..132158)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0107"
FT                   /old_locus_tag="TVS3553"
FT                   /product="transposase"
FT                   /db_xref="GOA:B6EIP3"
FT                   /db_xref="InterPro:IPR007069"
FT                   /db_xref="UniProtKB/TrEMBL:B6EIP3"
FT                   /protein_id="CAQ80861.1"
FT                   /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA
FT                   AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT
FT                   LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL
FT                   SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDW
FT                   SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD
FT                   HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE
FT                   AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA"
FT   CDS             complement(132239..133705)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0108"
FT                   /old_locus_tag="TVS3554"
FT                   /product="biotin sulfoxide reductase (fragment)"
FT                   /note="Similar to Escherichia coli Trimethylamine-N-oxide
FT                   reductase 2 precursor TorZ UniProt:P46923 (809 aa) fasta
FT                   scores: E()=1.2e-130, 65.714% id in 490 aa. CDS is
FT                   truncated by the insertion of the downstream IS element and
FT                   subsequent recombination events"
FT                   /inference="similar to sequence:UniProt:P46923"
FT   misc_feature    complement(132239..133444)
FT                   /locus_tag="VSAL_II0108"
FT                   /note="HMMPfam hit to PF00384, Molybdopterin
FT                   oxidoreductase, score 4.6e-101"
FT                   /inference="protein motif:HMMPfam:PF00384"
FT   sig_peptide     complement(133610..133705)
FT                   /locus_tag="VSAL_II0108"
FT   CDS             complement(join(133716..134039,134038..134808))
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0109"
FT                   /old_locus_tag="TVS3556"
FT                   /product="cytochrome C-type protein (pseudogene)"
FT                   /note="Similar to Escherichia coli Cytochrome c-type
FT                   protein TorY UniProt:P52005 (366 aa) fasta scores:
FT                   E()=1.2e-76, 53.151% id in 365 aa. CDS contains a
FT                   frameshift after codon 256. The sequence has been checked
FT                   and is believed to be correct"
FT                   /db_xref="PSEUDO:CAQ80863.1"
FT                   /inference="similar to sequence:UniProt:P52005"
FT   misc_feature    complement(order(134290..134496,134500..134808))
FT                   /locus_tag="VSAL_II0109"
FT                   /note="HMMPfam hit to PF03264, NapC/NirT cytochrome c
FT                   family, N-termin, score 3.2e-80"
FT                   /inference="protein motif:HMMPfam:PF03264"
FT   sig_peptide     complement(134719..134808)
FT                   /locus_tag="VSAL_II0109"
FT   misc_feature    complement(134728..134796)
FT                   /locus_tag="VSAL_II0109"
FT   CDS             135157..137238
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0110"
FT                   /old_locus_tag="TVS3559"
FT                   /product="TonB dependent receptor"
FT                   /note="Similar to Salmonella typhimurium Ferrioxamine B
FT                   receptor precursor FoxA UniProt:Q56145 (702 aa) fasta
FT                   scores: E()=8.7e-31, 26.752% id in 628 aa. Expression may
FT                   be regulated by Fur"
FT                   /db_xref="GOA:B6EQ93"
FT                   /db_xref="InterPro:IPR012910"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ93"
FT                   /inference="similar to sequence:UniProt:Q56145"
FT                   /protein_id="CAQ80864.1"
FT                   /translation="MFSKSQLALVIGAVLSIPFAYAETDASTTDEHMVVTGRDYGYKAD
FT                   TNSTSMRMEATQLETPGQVTVIDEQIIDEQRASTLGEVLKNDSSISEGSKSTNRERFYL
FT                   RGFKLSSSSSFLRDGVQHWSHYRQPIELLERVEVMKGPAGLLYGKSTPGGLVNMISKKP
FT                   TYETQVTISQDIGSNNYTRSIADVSGSLNEDQTLRARVILSQENQDSWRTRFDGTAVET
FT                   DRTVGGLFVDYDINEDIMLSAHYDRTNEIGDLDNGSKVDTTTGEVIDPNTVKDQNWAKT
FT                   DNDVANYGVGLTANLTDSWSVKTGISRQYYERQRTESDINKDGSSYKSSDRHDEWTFDT
FT                   AYVDFMGDVDALGVNHRLLVGGNGLNYDYKRQYDSSKSCITSTDTCSDGFNRPSDLNSS
FT                   NDTVGPHSKSQHYGIYLQDLVTFNDSWQLLAGARFAVDKTEDSKGKKEDYTNILSKLGV
FT                   IYHPAENGSIYAVYSESFEPVATINDADDVNDGQKQDPMKGNLYELGSKWELLDNSLYV
FT                   SGALFQIVQSNMQVSEDINGGSNTRTSQVGEQVHTGIELAATGYLTEAFSLSASTTFLD
FT                   AKYENDPALEGKTPADVPEFSASIWSQYDFNNGTGINLGVYHVGERYGDSKNEFKKDAY
FT                   TRVDMGISHTLKYDDSLDFVARFNVENLLDTDYLAGGSASDVVVGEGRNYMATLQVKY"
FT   sig_peptide     135157..135222
FT                   /locus_tag="VSAL_II0110"
FT   misc_feature    135322..135621
FT                   /locus_tag="VSAL_II0110"
FT                   /note="HMMPfam hit to PF07715, TonB-dependent Receptor Plug
FT                   Domain, score 3.3e-18"
FT                   /inference="protein motif:HMMPfam:PF07715"
FT   misc_feature    135583..135606
FT                   /locus_tag="VSAL_II0110"
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    136513..137235
FT                   /locus_tag="VSAL_II0110"
FT                   /note="HMMPfam hit to PF00593, TonB dependent
FT                   receptor,score 9.2e-23"
FT                   /inference="protein motif:HMMPfam:PF00593"
FT   CDS             137339..138106
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0111"
FT                   /old_locus_tag="TVS3560"
FT                   /product="putative exported protein"
FT                   /db_xref="InterPro:IPR016866"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ94"
FT                   /protein_id="CAQ80865.1"
FT                   /translation="MNILKTSIGIALATMITTAQASTLDQALSIENKSNAASAVSQTKI
FT                   DKSAEVTLTYKAEIEQLQEEVKNLAVYRDHLTGLVDSQQQEMTNLNNQIETIKDTRQGV
FT                   VPLMYKMLSGLTVLVEQDKPIKIAERQQRIEKLDHMMTRADVSDAEKYRRILEAYQIEM
FT                   DYGSKLGSYQTQIMVGNDEVIDADMLHLGRVSLLARRLDSSQYWSWNTYRNQWTLLDSS
FT                   FNDDLAKAYSVAYKQVAPSLLTLPVSLSLKEVK"
FT   sig_peptide     137339..137401
FT                   /locus_tag="VSAL_II0111"
FT   CDS             138108..139463
FT                   /transl_table=11
FT                   /gene="tolR2"
FT                   /locus_tag="VSAL_II0112"
FT                   /old_locus_tag="TVS3561"
FT                   /product="biopolymer transport protein TolR"
FT                   /db_xref="GOA:B6EQ95"
FT                   /db_xref="InterPro:IPR017270"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ95"
FT                   /protein_id="CAQ80866.1"
FT                   /translation="MSIKPLILAMSLFGFSLNTLAASSELVQETKQASHVQKQHNAERE
FT                   ADFMLTEKEFKAQKNALIAERKKLQKESDELSSLFSSNEQSLATIEQQLHLETGSLGEL
FT                   FGVVRQTAKDLNSELKNSVTGSIDANNAQVINDIVEAKSLPSMTQLTGLWQTMVQQVQA
FT                   SSESALMPVTVINGAGHRSEINAYRLGNMALVGDEGFLRWDNKKSVATYYSQQPDLAPS
FT                   VATLSDMQQQQVMMMAVDPSRGIMLEQLANSPTLKDRLQAGGVVGQIIIALLAIGLLIS
FT                   LFNGARLLVIRQQIRTQLKDPAHIGNNPLGRVLSVYDAEKTRSVEALELRLLETIVDEQ
FT                   QGLEKGLSMLKLLAALAPMLGLLGTVTGMIETFQVITQFGNGDPKVMAGGISMALVTTV
FT                   LGLVAAMPLLLTHNILSSQAESIRTILEKQGLSLVAEQAEKETNNTPVGMAA"
FT   sig_peptide     138108..138173
FT                   /gene="tolR2"
FT                   /locus_tag="VSAL_II0112"
FT   misc_feature    order(138912..138980,139161..139229,139272..139340)
FT                   /gene="tolR2"
FT                   /locus_tag="VSAL_II0112"
FT   misc_feature    138981..139400
FT                   /gene="tolR2"
FT                   /locus_tag="VSAL_II0112"
FT                   /note="HMMPfam hit to PF01618, MotA/TolQ/ExbB proton
FT                   channel family, score 9.3e-42"
FT                   /inference="protein motif:HMMPfam:PF01618"
FT   CDS             139463..139972
FT                   /transl_table=11
FT                   /gene="exbB2"
FT                   /locus_tag="VSAL_II0113"
FT                   /old_locus_tag="TVS3562"
FT                   /product="TonB system transport protein ExbB2"
FT                   /db_xref="GOA:B6EQ96"
FT                   /db_xref="InterPro:IPR002898"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ96"
FT                   /protein_id="CAQ80867.1"
FT                   /translation="MTAFLSHFMAQGGPILWWLGAVVAVCWLLVVERVFFLLFTFPAQR
FT                   KVWLDKWQQRDDHDSWYAKTIRDGWVSEAHLQLNQYLNFIKVLVAICPMLGLLGTVTGM
FT                   ISVFDVMANQGSSQPKLMASGISLATLPTMAGMVAALAGMFVHARLAKVCRRKEHHLEK
FT                   ALRSQS"
FT   misc_feature    order(139505..139573,139712..139780,139838..139906)
FT                   /gene="exbB2"
FT                   /locus_tag="VSAL_II0113"
FT   misc_feature    139553..139960
FT                   /gene="exbB2"
FT                   /locus_tag="VSAL_II0113"
FT                   /note="HMMPfam hit to PF01618, MotA/TolQ/ExbB proton
FT                   channel family, score 1.1e-28"
FT                   /inference="protein motif:HMMPfam:PF01618"
FT   CDS             139969..140373
FT                   /transl_table=11
FT                   /gene="exbD2"
FT                   /locus_tag="VSAL_II0114"
FT                   /old_locus_tag="TVS3563"
FT                   /product="TonB system transport protein ExbD2"
FT                   /db_xref="GOA:B6EQ97"
FT                   /db_xref="InterPro:IPR003400"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ97"
FT                   /protein_id="CAQ80868.1"
FT                   /translation="MRLGRRSSNQEEAQIDLTSMLDIVFIMLIFFIVTSSFVRESGVEV
FT                   NRPQASNVSSQKDAGIFVAITASNDIFIDKRMVDAERVQAILEHLLLEQPDASLVIQAD
FT                   EHAYNGTVVKVMDAAKGAGVKGIALAAEKN"
FT   misc_feature    139990..140370
FT                   /gene="exbD2"
FT                   /locus_tag="VSAL_II0114"
FT                   /note="HMMPfam hit to PF02472, Biopolymer transport protein
FT                   ExbD/TolR, score 1.9e-51"
FT                   /inference="protein motif:HMMPfam:PF02472"
FT   misc_feature    140011..140079
FT                   /gene="exbD2"
FT                   /locus_tag="VSAL_II0114"
FT   CDS             140373..140993
FT                   /transl_table=11
FT                   /gene="tonB2"
FT                   /locus_tag="VSAL_II0115"
FT                   /old_locus_tag="TVS3564"
FT                   /product="TonB protein"
FT                   /db_xref="GOA:B6EQ98"
FT                   /db_xref="InterPro:IPR006260"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ98"
FT                   /protein_id="CAQ80869.1"
FT                   /translation="MWRLLLAVPIALSMTVGLFTFMAWMVDNGHNGKPESGETIRFDMV
FT                   MVEQEQDVQRRQRRVPEKPETPEPPPEAKPMASQTQTSMATPQSNMPLIGLDSSISGLA
FT                   INAPSFTDFTGNQQAMPLYRVEPRYPSKAMKRGAEGFVVMSFTIDEQGRPTNVKVTDAK
FT                   PRRMFEREALKALEKWKYQPKVVDGKAIAQVGQTVKLEFTLAK"
FT   sig_peptide     140373..140447
FT                   /gene="tonB2"
FT                   /locus_tag="VSAL_II0115"
FT   misc_feature    140376..140444
FT                   /gene="tonB2"
FT                   /locus_tag="VSAL_II0115"
FT   misc_feature    140748..140852
FT                   /gene="tonB2"
FT                   /locus_tag="VSAL_II0115"
FT                   /note="HMMPfam hit to PF03544, Gram-negative bacterial tonB
FT                   protein, score 1.1e-12"
FT                   /inference="protein motif:HMMPfam:PF03544"
FT   CDS             140990..142192
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0116"
FT                   /old_locus_tag="TVS3565"
FT                   /product="putative exported protein"
FT                   /db_xref="GOA:B6EQ99"
FT                   /db_xref="InterPro:IPR011990"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQ99"
FT                   /protein_id="CAQ80870.1"
FT                   /translation="MMKLKLHSSVLILSFALFFSGAVQAQQLSQYNAGKVQRALQLQQQ
FT                   EKMPEAIAVLAELTPSQDYDKAYIQRMLGVFHWQAGSSKSAVKYLTKAVNSQQLADEQA
FT                   WITQRMLADLLLTEQRFSDALPHYYQLANSVPEKQKIGDLWFRISQTHYQLAQWGKVLS
FT                   ALNKHERVAIYKKQSERSQSLVLKLGAQLQLKQWKSAIPTLNRLIVLEPNKATWWQQLT
FT                   SIQLRLNQPKNALDTLILAERQGIELSQSELKLLAQLYAQRGIPEKAAEVLSQLDEAQS
FT                   DIDLLTMQASYWQAAKEWDKATVTWSKAATLDSRYYWQVAQLQIQEGHHQQGLKTLDKV
FT                   KDYKKTDDIALAKVRAYYKLNQIDSALLYAKRANDFTPSNEAKGWIKYLSQLRKTANTS
FT                   A"
FT   sig_peptide     140990..141064
FT                   /locus_tag="VSAL_II0116"
FT   repeat_region   complement(142202..143640)
FT                   /note="VSa9"
FT   CDS             complement(142368..143561)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0117"
FT                   /old_locus_tag="TVS3566"
FT                   /product="transposase"
FT                   /db_xref="GOA:B6EIP3"
FT                   /db_xref="InterPro:IPR007069"
FT                   /db_xref="UniProtKB/TrEMBL:B6EIP3"
FT                   /protein_id="CAQ80871.1"
FT                   /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA
FT                   AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT
FT                   LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL
FT                   SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDW
FT                   SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD
FT                   HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE
FT                   AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA"
FT   CDS             143791..144435
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0118"
FT                   /old_locus_tag="TVS3567"
FT                   /product="membrane protein"
FT                   /note="Similar to Pasteurella piscicida Putative
FT                   iron-regulated protein (fragment) UniProt:Q6ZXD3 (106 aa)
FT                   fasta scores: E()=1.7e-17, 54.054% id in 111 aa. Expression
FT                   may be regulated by Fur"
FT                   /db_xref="InterPro:IPR005625"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQA1"
FT                   /inference="similar to sequence:UniProt:Q6ZXD3"
FT                   /protein_id="CAQ80872.1"
FT                   /translation="MLLKNKQVQLWARRLHVYVSMALLLVVLFFSITGITLNRPDWFVS
FT                   SSPDIKNTTLSVPNDVLFSLDEKHHVLWNKPNTVALLDYLNQHTNLSGTPSNVDIFTDV
FT                   EDGELVEGELSLNYKGPGYNASVYIDLTTGIADIESSNYGVVALLNDLHKGRNSGEVWK
FT                   AFIDITALLMVFFVLTGVCLILPKKRTLMTSMKWMAFGSSITLALYFIAVP"
FT   sig_peptide     143791..143904
FT                   /locus_tag="VSAL_II0118"
FT   misc_feature    143824..143904
FT                   /locus_tag="VSAL_II0118"
FT                   /note="HMMPfam hit to PF03929, PepSY-associated TM
FT                   helix,score 0.011"
FT                   /inference="protein motif:HMMPfam:PF03929"
FT   misc_feature    order(143833..143901,144280..144348,144361..144429)
FT                   /locus_tag="VSAL_II0118"
FT   misc_feature    144235..144342
FT                   /locus_tag="VSAL_II0118"
FT                   /note="HMMPfam hit to PF03929, PepSY-associated TM
FT                   helix,score 0.078"
FT                   /inference="protein motif:HMMPfam:PF03929"
FT   CDS             144469..144993
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0119"
FT                   /old_locus_tag="TVS3568"
FT                   /product="putative exported protein"
FT                   /db_xref="InterPro:IPR014469"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQA2"
FT                   /protein_id="CAQ80873.1"
FT                   /translation="MASLSTYLRHSIAAMVLTTPLLANSAAISESAKVDVAFELPTITT
FT                   TMYARPYVAVWIENSERKSVKTIELWVGKDEWLKDLRSWWRKVGRYDRELVDAVTSATR
FT                   PAGKYKFSWDGKDDSGQTLPQGDYTLHIEVVREHGGRNYLRQKMKLTDTDMSYQLAPTE
FT                   ETGVITIEYKN"
FT   sig_peptide     144469..144564
FT                   /locus_tag="VSAL_II0119"
FT   CDS             144999..145874
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0120"
FT                   /old_locus_tag="TVS3569"
FT                   /product="putative membrane protein"
FT                   /note="Possible alternative translational start site after
FT                   codon 10"
FT                   /db_xref="InterPro:IPR019613"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQA3"
FT                   /protein_id="CAQ80874.1"
FT                   /translation="MSIYQGIKRIMKTTIMNNKVKAAILSGVMAAGLLVATTANAHPRW
FT                   VLPSHFTVSKEGGDWLTFDVTASHGTFVFDKPAGSDQAQVVMPDGRTERPNFVVKGKRR
FT                   SMFDFYFEEEGTHKVRINNEPTYYTQYKAGRRDTVKWIKATKADRALVLPEKARDVVSQ
FT                   VSFTRAESYVTVGKPTTEAMKLDNTLLELKPLTHPSDILEGEPVTFQFFFNGKPQAGVT
FT                   ADITREGTLYRNHQEQIDVVSDKEGKITFTPETAGRYLMKSNYKGELKDHPLAEQASVN
FT                   VHLTFEALLQ"
FT   sig_peptide     144999..145121
FT                   /locus_tag="VSAL_II0120"
FT   misc_feature    145056..145124
FT                   /locus_tag="VSAL_II0120"
FT   CDS             145932..146249
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0121"
FT                   /old_locus_tag="TVS3570"
FT                   /product="putative exported protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQA4"
FT                   /protein_id="CAQ80875.1"
FT                   /translation="MTKVNLKTLFVSSLLFSSASFAHFPLMSCWFESNQVLCETGYSDG
FT                   SKAVDYDVNMYDYDDNLIAKVTTDKRSIAEFANPETDFYLVFDSGHESPVEVDVVEISE
FT                   K"
FT   sig_peptide     145932..145997
FT                   /locus_tag="VSAL_II0121"
FT   CDS             146246..146809
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0122"
FT                   /old_locus_tag="TVS3571"
FT                   /product="putative membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQA5"
FT                   /protein_id="CAQ80876.1"
FT                   /translation="MIIQSVTPDNGSAEGKWIALIIGCILLIAVVGLPYHQSNDEGVKL
FT                   ESHQVLITDLAQDDLAMIAELRLAYEEIYDIQAESTEENAWPEIVYLADEWLPPFVQDQ
FT                   SWERRGKHQWQHLGSGVYLGLKVKKEGAASFIFNVKGDDIELWLHPELMSTSISSDSIS
FT                   WNESELIQQQWVQVVFPAHDTHLN"
FT   misc_feature    146282..146350
FT                   /locus_tag="VSAL_II0122"
FT   CDS             146832..147755
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0123"
FT                   /old_locus_tag="TVS3572"
FT                   /product="periplasmic solute binding protein"
FT                   /note="Similar to Streptococcus sanguis Manganese ABC
FT                   transporter substrate-binding lipoprotein precursor SsaB
FT                   UniProt:P31304 (309 aa) fasta scores: E()=8.1e-14, 26.774%
FT                   id in 310 aa"
FT                   /db_xref="GOA:B6EQA6"
FT                   /db_xref="InterPro:IPR006129"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQA6"
FT                   /inference="similar to sequence:UniProt:P31304"
FT                   /protein_id="CAQ80877.1"
FT                   /translation="MMKSILYVRSFVLLSLLSLFSASAMSAEKPLVIGITLQPYYSYVK
FT                   AVVGDKAEILPLVDAGFNPHNYLPQPNDLKRLNKMDVIVVNGIGHDDFALKVIAAANNS
FT                   ELMVLEANKDVPLLPAMGQSVGKGAVNPHTFVGLSTTIQKVYTIANELSRIDRENASFY
FT                   RKNARKYAKKFRLMKRDAMLSLGELDTAGMKVATTHNAYGYILQEFGVDVAAVIEPAHG
FT                   VEPSASQLQGTIEKIRESDIDVLFYELNMPNRFVDTIEEATGVQLYRFSHMTHGPYEDN
FT                   KVEIEMKSNLDTLIEAMKFAADKDAK"
FT   sig_peptide     146832..146909
FT                   /locus_tag="VSAL_II0123"
FT   misc_feature    146844..146912
FT                   /locus_tag="VSAL_II0123"
FT   misc_feature    146853..147728
FT                   /locus_tag="VSAL_II0123"
FT                   /note="HMMPfam hit to PF01297, Periplasmic solute binding
FT                   protein family, score 3.1e-24"
FT                   /inference="protein motif:HMMPfam:PF01297"
FT   CDS             147755..148519
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0124"
FT                   /old_locus_tag="TVS3573"
FT                   /product="ABC transporter, ATP binding protein"
FT                   /note="Similar to Bacillus subtilis Manganese transport
FT                   system ATP-binding protein MntB UniProt:O34338 (250 aa)
FT                   fasta scores: E()=5.7e-17, 33.047% id in 233 aa"
FT                   /db_xref="GOA:B6EQA7"
FT                   /db_xref="InterPro:IPR017871"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQA7"
FT                   /inference="similar to sequence:UniProt:O34338"
FT                   /protein_id="CAQ80878.1"
FT                   /translation="MSGPAISLTNVGLTYGENTILEGVNQRFEAGQCHVVMGPNGGGKT
FT                   SLLRSILGLTAFQGEINIEWPEQKGVIGYVPQKAVFESSLPLTVKDFILLNQTRVPLFL
FT                   SALWRKKSSQEAFAMAQLERVGMSNRADRRMGQLSGGEQQRVLFAQALLDNPDLLVLDE
FT                   PTTGMDEHGVRYLESLMHEFIAQGKTVLAVHHDVTAVRRLKAHVHVINRNLVDSGCYSE
FT                   VLKPEKIERLFNHYTGASAQYDASKTNNGEAA"
FT   misc_feature    147845..148393
FT                   /locus_tag="VSAL_II0124"
FT                   /note="HMMPfam hit to PF00005, ABC transporter, score
FT                   2.3e-48"
FT                   /inference="protein motif:HMMPfam:PF00005"
FT   misc_feature    147866..147889
FT                   /locus_tag="VSAL_II0124"
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    148166..148210
FT                   /locus_tag="VSAL_II0124"
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:ProSite:PS00211"
FT   CDS             148519..149394
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0125"
FT                   /old_locus_tag="TVS3574"
FT                   /product="ABC-3 transporter protein, membrane component"
FT                   /db_xref="GOA:B6EQA8"
FT                   /db_xref="InterPro:IPR001626"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQA8"
FT                   /protein_id="CAQ80879.1"
FT                   /translation="MELFRQWALYGVDQGFLSDSFSYAFMVNAIVAAILLGPLLGGLGT
FT                   LVIAKRLAFFSEAVGHAALTGIALGVLLGEPAENPIIGLFSFCMIFALLLHFVRNRTNV
FT                   PYDTLVGVFLALALAVGAALLMYVARKINIHMLENVLFGSILTVTDQDIAILAGSCLLI
FT                   VVVLIPMFNRILLTCISPDIARVRGYKTNFYDYLFVMMITLVTIASVKIVGAVLVGALL
FT                   LIPGATARLLTKNMGSFVLMSALLATISCLIGTVLPMELEMPVPSGAAIIIVSAFFFLL
FT                   ATTYRILRKN"
FT   misc_feature    order(148576..148644,148672..148740,148759..148812,
FT                   148840..148908,148975..149043,149122..149190,
FT                   149227..149295,149323..149382)
FT                   /locus_tag="VSAL_II0125"
FT   misc_feature    148582..149376
FT                   /locus_tag="VSAL_II0125"
FT                   /note="HMMPfam hit to PF00950, ABC 3 transport family,score
FT                   9.3e-52"
FT                   /inference="protein motif:HMMPfam:PF00950"
FT   CDS             149437..150321
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0126"
FT                   /old_locus_tag="TVS3575"
FT                   /product="membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQA9"
FT                   /protein_id="CAQ80880.1"
FT                   /translation="MKQNSMKWIAIASICVASLFSIKTVIAADVLTATPVTYMLSSELL
FT                   KETSLTTKYLPPNRYGIERLPNWFANKGAKTVQDSVKTAQAVVTIGAVWADDPLYVNAR
FT                   YSNIQIIEVDASQAITPRAQGVAALRLSDGTTSKYAWLNPTNLIRMVAIVSDDFQRIWP
FT                   DKSEQIQKNQEQFMLSVRQLINQQQKVILENDIDSVILLSEQLEDFASGNQLFVVDRLT
FT                   KPALEWTEDDKAQLKDLIEEDESVWIITTQKPNKQMQAFLPMERVLVVDAVDRWGRAGI
FT                   NSKAPLQRWQLAL"
FT   sig_peptide     149437..149517
FT                   /locus_tag="VSAL_II0126"
FT   misc_feature    149461..149529
FT                   /locus_tag="VSAL_II0126"
FT   CDS             150664..151485
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0127"
FT                   /old_locus_tag="TVS3576"
FT                   /product="hypothetical protein, putative phage gene"
FT                   /note="Weakly similar Streptococcus pyogenes Putative
FT                   recombinase-phage-associated UniProt:Q8K7P3 (191 aa) fasta
FT                   scores: E()=3.9e-05, 32.174% id in 115 aa"
FT                   /db_xref="GOA:B6EQB0"
FT                   /db_xref="InterPro:IPR013762"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQB0"
FT                   /inference="similar to sequence:UniProt:Q8K7P3"
FT                   /protein_id="CAQ80881.1"
FT                   /translation="MSYVEPIKTRKHLKHAEKYLKKNHDLAFTLVWNIGIESGLRISDI
FT                   LKLQYRNINLSNGQCKIIESKGTLARRAKAKMRVLKKVKEELLFHYQARGLSKKMSIIY
FT                   ITPPQLIVSFIPKSWESTVNERVKHAIDSASPVTRTFYLSESILITLKQRKQEYKELAN
FT                   DYIFNRQTLSSNRAKGGEGLLTRQACWYVFSKLTAILKEIGVDVKVGCHTLRKSFARHL
FT                   YFATGKDIGLLMTVIGHQSESMSLRYIGLSKDETELAQKKLIVYLSRKTRI"
FT   misc_feature    150697..151437
FT                   /locus_tag="VSAL_II0127"
FT                   /note="HMMPfam hit to PF00589, Phage integrase family,score
FT                   0.0026"
FT                   /inference="protein motif:HMMPfam:PF00589"
FT   CDS             151885..152211
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0128"
FT                   /old_locus_tag="TVS3577"
FT                   /product="hypothetical protein, putative phage gene"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQB1"
FT                   /protein_id="CAQ80882.1"
FT                   /translation="MDMLRKRVYSRFHKAVNVSGYLSLESIIDSYFVYQSGYRTDNSFD
FT                   PIEMDHVNMNSIIQSKKNRTLYSYLKMEKSLKMSNRNRSIKHNGTFDKLDTANSLMCFL
FT                   KNNL"
FT   repeat_region   complement(order(152301..152945,154411..156054))
FT                   /note="VSa2"
FT   repeat_region   complement(152301..152324)
FT                   /note="IR of VSa2"
FT   CDS             complement(join(152317..152943,154386..155243))
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0129"
FT                   /old_locus_tag="TVSb0075"
FT                   /product="transposase (pseudogene)"
FT                   /note="Similar to Shewanella sp. Transposase IS66
FT                   UniProt:A1RLT8 (500 aa) fasta scores: E()=3.9e-120, 57.0%
FT                   id in 493 aa. CDS is disrupted by the insertion of an IS
FT                   element after codon 286"
FT                   /db_xref="PSEUDO:CAQ80883.1"
FT                   /inference="similar to sequence:UniProt:A1RLT8"
FT   repeat_region   complement(152946..154383)
FT                   /note="VSa9"
FT   CDS             complement(153112..154305)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0130"
FT                   /old_locus_tag="TVS3579"
FT                   /product="transposase"
FT                   /db_xref="GOA:B6EIP3"
FT                   /db_xref="InterPro:IPR007069"
FT                   /db_xref="UniProtKB/TrEMBL:B6EIP3"
FT                   /protein_id="CAQ80884.1"
FT                   /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA
FT                   AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT
FT                   LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL
FT                   SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDW
FT                   SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD
FT                   HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE
FT                   AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA"
FT   CDS             complement(155315..155662)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0131"
FT                   /old_locus_tag="TVSb0076"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR008878"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN4"
FT                   /protein_id="CAQ80885.1"
FT                   /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI
FT                   FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL
FT                   GHQPVHYQTTL"
FT   CDS             complement(155659..155973)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0132"
FT                   /old_locus_tag="TVS3583"
FT                   /product="transposase"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN3"
FT                   /protein_id="CAQ80886.1"
FT                   /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA
FT                   RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS
FT                   "
FT   repeat_region   complement(156031..156054)
FT                   /note="IR of VSa2"
FT   CDS             complement(156056..156799)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0133"
FT                   /old_locus_tag="TVS3584"
FT                   /product="putative sodium/sulfate symporter (fragment)"
FT                   /note="Similar to Vibrio cholerae Transporter, NadC family
FT                   UniProt:Q9KNE0 (462 aa) fasta scores: E()=7.7e-60, 71.774%
FT                   id in 248 aa. CDS is truncated by the insertion of the
FT                   downstream IS element and subsequent recombination events"
FT                   /inference="similar to sequence:UniProt:Q9KNE0"
FT   misc_feature    complement(order(156080..156148,156206..156265,
FT                   156302..156370,156470..156538,156551..156604,
FT                   156614..156667,156686..156754))
FT                   /locus_tag="VSAL_II0133"
FT   CDS             157455..158930
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0134"
FT                   /old_locus_tag="TVS3585"
FT                   /product="chitin binding protein"
FT                   /note="Similar to Vibrio cholerae GlcNac-binding protein A
FT                   precursor GbpA UniProt:Q9KLD5 (485 aa) fasta scores:
FT                   E()=1.1e-115, 60.123% id in 489 aa"
FT                   /db_xref="GOA:B6EQB6"
FT                   /db_xref="InterPro:IPR004302"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQB6"
FT                   /inference="similar to sequence:UniProt:Q9KLD5"
FT                   /experiment="The expressed protein is found to be exported
FT                   (extracellular) by Aliivibrio salmonicida"
FT                   /protein_id="CAQ80888.1"
FT                   /translation="MMNKCSTKTLLALSLIAASSGVAAHGYVSETNDGIAGSRAALCKY
FT                   PTSDTQEKNTNCGSVQWEPQSVEGDEGFPEFGPADGQIASAGLSQFSELNEQTSDRWVK
FT                   RPITAGKQTFEWTFRANHVTKTWTYYMTKQNWNQNAVLTRDSFDLTPFCELGYNMNQPP
FT                   LAPETFSHECVVPEREGYQVILAVWDVGDTSKAFYNVIDVKFSGDGGVVDPTWTQGGQI
FT                   NPTRDLNVGDEVYTRVFVTSGENSALSTRLVIDNATQGQANNWTYALATKINKEQENIG
FT                   AGQLNDKGEFSPSFGSNPVYLKSGSGLNNVEIGYQIEAPEPSYELNVQGLEPMYTIGEE
FT                   ATELDLTLAATGDMNVELTVYNHAKEALANTVVDMKDGDVEPIVMTLSKSEKGHHMLVS
FT                   IIKNTKGELIDQITSDFHLMEAQTPPPAGDYEFVFPENVKNYTAGTKVLAEDGAIYQCK
FT                   PFPYSGYCVQWTETATNFAPGVGSDWAMAWDKI"
FT   sig_peptide     157455..157532
FT                   /locus_tag="VSAL_II0134"
FT   misc_feature    157482..158069
FT                   /locus_tag="VSAL_II0134"
FT                   /note="HMMPfam hit to PF03067, Chitin binding domain,score
FT                   2.1e-33"
FT                   /inference="protein motif:HMMPfam:PF03067"
FT   CDS             158992..159531
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0135"
FT                   /old_locus_tag="TVS3586"
FT                   /product="putative cytochrome b561"
FT                   /note="Similar to Escherichia coli Cytochrome b561 homolog
FT                   2 UniProt:P75925 (188 aa) fasta scores: E()=6.9e-05,26.966%
FT                   id in 178 aa"
FT                   /db_xref="GOA:B6EQB7"
FT                   /db_xref="InterPro:IPR011577"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQB7"
FT                   /inference="similar to sequence:UniProt:P75925"
FT                   /protein_id="CAQ80889.1"
FT                   /translation="MNLPTYYDRFSQILHWVMATIIIYATIAGYVMHLVINNYPVVFYV
FT                   LSIINMSLATIGTLLFIIRWFWSYFRPAIKEVDHKSAIEANVAGFMHALLYFLMFVVFV
FT                   SGFLMLEHPYTFFWLFDVNNVVENLAINQFFFMIHRAGCALLGLSVIIHVAAACHHHFI
FT                   RKNRLLDRMTKYKEQS"
FT   misc_feature    159001..159516
FT                   /locus_tag="VSAL_II0135"
FT                   /note="HMMPfam hit to PF01292, Cytochrome b561 family,score
FT                   1.3e-11"
FT                   /inference="protein motif:HMMPfam:PF01292"
FT   misc_feature    order(159028..159096,159124..159192,159253..159321,
FT                   159412..159480)
FT                   /locus_tag="VSAL_II0135"
FT   CDS             160057..160548
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0136"
FT                   /old_locus_tag="TVS3587"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="InterPro:IPR002725"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQB8"
FT                   /protein_id="CAQ80890.1"
FT                   /translation="MTKLRYLKGYPEHILAQIELMIDNGKLAEWVKNKYPTMHDITSEK
FT                   ALFEYTQAFKNKYIKKSSPLSKVVYDPKIHIVNNALGLHTFVSRIHGNKLKAKNEIRIS
FT                   SVFRKAPEPLLRMLVVHELAHIKEKAHNKAFYALCCHMEPEYHQLEFDARLYLTYLETI
FT                   "
FT   misc_feature    160069..160536
FT                   /locus_tag="VSAL_II0136"
FT                   /note="HMMPfam hit to PF01863, Protein of unknown function
FT                   DUF45, score 3.2e-05"
FT                   /inference="protein motif:HMMPfam:PF01863"
FT   CDS             complement(160552..160908)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0137"
FT                   /old_locus_tag="TVS3588"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="InterPro:IPR005358"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQB9"
FT                   /protein_id="CAQ80891.1"
FT                   /translation="MTINSIDITVLTESSPTESLLTTASLNTGSGITCENCQACCCKLE
FT                   VMIITDTGVPEVYIDRDEWGSEVMLRSEDGWCAAVDRDTLMCTIYENRPWICREFEMAS
FT                   YECEEERKEQGIDK"
FT   misc_feature    complement(160573..160815)
FT                   /locus_tag="VSAL_II0137"
FT                   /note="HMMPfam hit to PF03692, Uncharacterised protein
FT                   family (UPF0153), score 2.2e-05"
FT                   /inference="protein motif:HMMPfam:PF03692"
FT   CDS             161245..161445
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0138"
FT                   /old_locus_tag="TVS3589"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQC0"
FT                   /protein_id="CAQ80892.1"
FT                   /translation="MSINSIDHGDITEMKGKYDYDIADEVVTNITECQKKTAARRRIET
FT                   MREIRESGLTLAEAKDLGLIH"
FT   CDS             complement(161531..162022)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0139"
FT                   /old_locus_tag="TVS3590"
FT                   /product="PilA-like type-IV pilus protein"
FT                   /note="Similar to Vibrio fischeri PilA UniProt:Q8KTJ5 (128
FT                   aa) fasta scores: E()=1e-05, 35.583% id in 163 aa. CDS
FT                   contains additional internal amino acids, residues 63 to
FT                   100, in comparison to Vibrio fischeri orthologue"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQC1"
FT                   /inference="similar to sequence:UniProt:Q8KTJ5"
FT                   /protein_id="CAQ80893.1"
FT                   /translation="MKNNKKFTSTELIIVVVILVILGLAATPFLLNIQHNAKQRVINGV
FT                   KDATEHADKMAHEQYNQGYTVQIGTTDRYFLDLNQNSLQDINEPILVLGHLDNASVVTS
FT                   LNLQGKLLVSESKNTNNDALYIGFANSIDELESSQCYFRYEQATPSTPTPSFIVESSGC
FT                   "
FT   misc_feature    complement(161927..161995)
FT                   /locus_tag="VSAL_II0139"
FT   sig_peptide     complement(161948..162022)
FT                   /locus_tag="VSAL_II0139"
FT   CDS             162314..162520
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0140"
FT                   /old_locus_tag="TVS3591"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQC2"
FT                   /protein_id="CAQ80894.1"
FT                   /translation="MKNLSLLPPKEKNKIELDKQAAFFVWKVKNAKAGPDLWVTEAGKL
FT                   EDESERLFFQQSIEKYKSKMGVA"
FT   CDS             162613..163335
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0141"
FT                   /old_locus_tag="TVS3592"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="InterPro:IPR017856"
FT                   /db_xref="UniProtKB/Swiss-Prot:B6EQC3"
FT                   /protein_id="CAQ80895.1"
FT                   /translation="MGRSFEVRKSSMAKTQGAKIKVYSKYGKEIYMCAKNGGPDPDMNL
FT                   SLKHLISKAKKDQVPTHIIDKAIDKANGGGGEDYQHARYEGFAPGGASVIVDCLTDNGN
FT                   RTFQDVRQCFVKTGAKIGSPGTSSHMFDHQAVFQFKGEDEEAVLEALMMQDVDVTDIEL
FT                   EDGVITVFAPNTEFFKVKTALAAEYPDLVVDVEEITFVPQNPMEITGEDAEKFQKFLDL
FT                   LDDCDDVQQVYHNAELED"
FT   misc_feature    162619..163323
FT                   /locus_tag="VSAL_II0141"
FT                   /note="HMMPfam hit to PF01709, Domain of unknown function
FT                   DUF28, score 6.6e-109"
FT                   /inference="protein motif:HMMPfam:PF01709"
FT   CDS             163541..165028
FT                   /transl_table=11
FT                   /gene="rhlE"
FT                   /locus_tag="VSAL_II0142"
FT                   /old_locus_tag="TVS3593"
FT                   /product="putative ATP-dependent RNA helicase (DEAD/DEAH
FT                   box helicase)"
FT                   /EC_number="3.6.1.-"
FT                   /note="Similar to Escherichia coli Putative ATP-dependent
FT                   RNA helicase RhlE UniProt:P25888 (454 aa) fasta scores:
FT                   E()=2.9e-84, 58.590% id in 454 aa"
FT                   /db_xref="GOA:B6EQC4"
FT                   /db_xref="InterPro:IPR014021"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQC4"
FT                   /inference="similar to sequence:UniProt:P25888"
FT                   /protein_id="CAQ80896.1"
FT                   /translation="MGFTSLGLSAPILKAVEAQGYSTPSPIQLQAIPAVIEGKDVMAAA
FT                   QTGTGKTAGFTLPLLERLSKGQKLKFNQVRALILTPTRELAAQVHESVEKYSVNLPLTS
FT                   DVVFGGVKANPQMQRLRKGVDVLVATPGRLLDLANQNAIKFDQLEILVLDEADRMLDMG
FT                   FIHDIKKILNKLPKNRQNLLFSATFSDEIRQLAKGLVNNPVEISVATRNTTAETVEQSV
FT                   YVVDKTKKARVLTKLIKDNDWKQVLVFSKTKHGANRLAKTLEEKGISSAAIHGNKSQGA
FT                   RTKALANFKSGQVRVLVATDIAARGLDIEQLPQVINVDLPKVPEDYVHRIGRTGRAGAT
FT                   GKAISFVSEDEASELFAIERLIQKILPRHTLEGFEPEMKVPESRLDSRPIKAKKPKKTH
FT                   APRVEHKDGQRSGENRSGHKQGAKPAPRRNTENKDGAAKKEGGNAKKRPTDGGKPRSKG
FT                   NGENRGNGSNFGSGKPKSDATKPRRQGPRPARKPVAQ"
FT   misc_feature    163613..164125
FT                   /gene="rhlE"
FT                   /locus_tag="VSAL_II0142"
FT                   /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,score
FT                   1.8e-68"
FT                   /inference="protein motif:HMMPfam:PF00270"
FT   misc_feature    163673..163696
FT                   /gene="rhlE"
FT                   /locus_tag="VSAL_II0142"
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    163994..164020
FT                   /gene="rhlE"
FT                   /locus_tag="VSAL_II0142"
FT                   /note="PS00039 DEAD-box subfamily ATP-dependent helicases
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00039"
FT   misc_feature    164324..164554
FT                   /gene="rhlE"
FT                   /locus_tag="VSAL_II0142"
FT                   /note="HMMPfam hit to PF00271, Helicase conserved
FT                   C-terminal domain, score 1.3e-32"
FT                   /inference="protein motif:HMMPfam:PF00271"
FT   CDS             165330..166778
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0143"
FT                   /old_locus_tag="TVS3594"
FT                   /product="membrane associated GGDEF protein"
FT                   /note="Expression may be regulated by Fur"
FT                   /db_xref="InterPro:IPR000160"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQC5"
FT                   /protein_id="CAQ80897.1"
FT                   /translation="MRVKNIVSVGSLLLLSVALACSITYVVKSNNKQSKLIESDLEFNA
FT                   NFVSIWLKTAFYHSNDVLHQLSDTLEQDGFATLPLSGKSYQEQSDVFEFQYETLINAIH
FT                   VFVVNKNCILLNTKTIGGVDLSSREYCQILKQDDKSVESIITSPFKDLLNRNVIVQGVK
FT                   ITDEKNNFAGIVGLLTDFTFFNQVLKNVKLSENSTISILSSDFTVLASTAPQHLPIGEK
FT                   LDFSYIPENKIKGLKYNQKVMFDSAKTYNGEHQGILVKKVSDLPFMILVTKAKYYWFTP
FT                   LYITIFIVSMLMILLSFFIFKNAYYFQTLIYQAEHYSKLALYDELTGVCNRRCFEKVMS
FT                   SFLEEYKQKGVVFSLVIFDIDFFKDINDTYGHDRGDEVLRVFSKTCSSVMSPEDIFARL
FT                   GGDEFVMIMANKTSQEAALIMTELLHQIRRLSVMTSKGELKISSSIGITQMKTKNDDFS
FT                   VLLERADKALYQVKRSGRNGVVVR"
FT   sig_peptide     165330..165389
FT                   /locus_tag="VSAL_II0143"
FT   misc_feature    order(165342..165410,166158..166226)
FT                   /locus_tag="VSAL_II0143"
FT   misc_feature    166278..166763
FT                   /locus_tag="VSAL_II0143"
FT                   /note="HMMPfam hit to PF00990, GGDEF domain, score 3.7e-46"
FT                   /inference="protein motif:HMMPfam:PF00990"
FT   CDS             166914..168359
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0144"
FT                   /old_locus_tag="TVS3595"
FT                   /product="membrane associated GGDEF protein"
FT                   /db_xref="InterPro:IPR000160"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQC6"
FT                   /protein_id="CAQ80898.1"
FT                   /translation="MKERTTVFYSSMLFVMLISTVLIITISNNYQQHNKRLESELRFNA
FT                   NFVSTWLNLVYKHSNNVLEGMATDLYNNHLLTVPLNPMVLNEQKKLLNIEAEMLINAST
FT                   IFAINNKCILVNAISDVGADLSSREYCKQIQESNKHTIFTDPFVDLFGKTVVAQGVRIT
FT                   NKSDQFIGMVGILSGLDFFSSALSALDISTKSSVSILSSDLMVLATNRTELLKIGSRPV
FT                   ISKESTEILQGLADNQEVFFEAMRKHHGFNQMVFAKKVPGYPFILIVSKPKYFWADYAY
FT                   LSIISFILVISLVVALLMKNTFLLSKLLSQNDHYFKLALHDELTGVLNRRGFEKNTKQV
FT                   LELAKSSPTSIVSVLFDIDYFKQINDTYGHDKGDEVLRSFTQICQAHITHCDVFARLGG
FT                   DEFVMLLPNQNGQQATKCINELLDKIRAIRVETPLGSISVSSSIGMSEVRSPNESIAKW
FT                   LERADKALYQAKKQGRNCVVLKA"
FT   misc_feature    order(166932..166991,167736..167804)
FT                   /locus_tag="VSAL_II0144"
FT   misc_feature    167856..168341
FT                   /locus_tag="VSAL_II0144"
FT                   /note="HMMPfam hit to PF00990, GGDEF domain, score 3e-49"
FT                   /inference="protein motif:HMMPfam:PF00990"
FT   CDS             168657..169859
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0145"
FT                   /old_locus_tag="TVS3596"
FT                   /product="multidrug resistance protein D"
FT                   /db_xref="InterPro:IPR011701"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQC7"
FT                   /protein_id="CAQ80899.1"
FT                   /translation="MQKSYSLGTFSFLIVILVAVGQMTQTMYVPSIGYMASEFKVSPAS
FT                   LQAVMAVYLIPYGLSQFFYGPLSDRLGRRFVILSGLGLYIVGALLALFAHDYTYFLVGS
FT                   FIQGLGIGSAGAMCRTVPRDCFSGAELHKANSLISMCMMFSPLMAPVLGGYLTEAFGWR
FT                   SSYLFLALFSIAVMIIMTTSMKETLPLEVRRKEPVLKSYRYVLSEHRFQGYLICLVATF
FT                   AGVAVFEAAAGVLLGGKLKLPATMVSILFILPIPGYLAGAGLSAVIAKRWSEKKSLDVG
FT                   LVSIVFGSAIVLIPGIMGLTTALTLVGGAVLYFLGAGILFPAATTGALSPFPHHAGTAG
FT                   ALLGGMQNLGAGLTTMAASMIPANSQMPVGLIMFLMSLLAIYGLRKVHSTPPSSEMPLA
FT                   V"
FT   sig_peptide     168657..168719
FT                   /locus_tag="VSAL_II0145"
FT   misc_feature    order(168675..168743,168801..168860,168879..168938,
FT                   168951..169019,169056..169124,169152..169208,
FT                   169296..169364,169392..169460,169497..169556,
FT                   169584..169652,169671..169739,169749..169808)
FT                   /locus_tag="VSAL_II0145"
FT   misc_feature    168696..169745
FT                   /locus_tag="VSAL_II0145"
FT                   /note="HMMPfam hit to PF07690, Major Facilitator
FT                   Superfamily, score 7.5e-47"
FT                   /inference="protein motif:HMMPfam:PF07690"
FT   misc_feature    168882..168932
FT                   /locus_tag="VSAL_II0145"
FT                   /note="PS00251 TNF family signature."
FT                   /inference="protein motif:ProSite:PS00251"
FT   CDS             complement(169989..171377)
FT                   /transl_table=11
FT                   /gene="dbpA"
FT                   /locus_tag="VSAL_II0146"
FT                   /old_locus_tag="TVS3597"
FT                   /product="ATP-independent RNA helicase (DEAD/DEAH box
FT                   helicase)"
FT                   /EC_number="3.6.1.-"
FT                   /db_xref="GOA:B6EQC8"
FT                   /db_xref="InterPro:IPR014021"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQC8"
FT                   /protein_id="CAQ80900.1"
FT                   /translation="MNQTSFSSLNLNPYLLQNLDTLGYTEMTPIQAQSLPFMLEGKDVI
FT                   AQGKTGSGKTAAFGLGLLANLDVKRFRVQSLVLCPTRELADQVAVEIRKLARSIHNIKV
FT                   LTLCGGVPFGPQIGSLEHGAHIIVGTPGRVEEHLRKGYLNLDNLNTFVLDEADRMLEMG
FT                   FQDAIDLVLDHAPAKRQNLLFSATFPPQIKSIADRIMNNPIMTKAEDKIEETSITQHFY
FT                   KVDDFEDRLKALQILLLKHRPESTVIFCNTKRVTQEVADELRHFDFSVTALHGDLEQRD
FT                   RDKALVRFANKSTSILVATDVAARGLDIDSLDAVINFELSRDPEVHVHRIGRTGRAGKK
FT                   GIALSLFNNKETNSFAQIEDYMSLTLNDEPLPSEDHLSEQPHFPEMITLWIDGGKKNKL
FT                   RPGDILGALTGKDGVDGKQVGKINVFDFHAYVAVHTSIAKAALQKLETGKMKGRTFRVS
FT                   RMRG"
FT   misc_feature    complement(169995..170249)
FT                   /gene="dbpA"
FT                   /locus_tag="VSAL_II0146"
FT                   /note="HMMPfam hit to PF03880, DbpA RNA binding
FT                   domain,score 2.9e-25"
FT                   /inference="protein motif:HMMPfam:PF03880"
FT   misc_feature    complement(170364..170594)
FT                   /gene="dbpA"
FT                   /locus_tag="VSAL_II0146"
FT                   /note="HMMPfam hit to PF00271, Helicase conserved
FT                   C-terminal domain, score 1.5e-31"
FT                   /inference="protein motif:HMMPfam:PF00271"
FT   misc_feature    complement(170793..171296)
FT                   /gene="dbpA"
FT                   /locus_tag="VSAL_II0146"
FT                   /note="HMMPfam hit to PF00270, DEAD/DEAH box helicase,score
FT                   6.4e-62"
FT                   /inference="protein motif:HMMPfam:PF00270"
FT   misc_feature    complement(170898..170924)
FT                   /gene="dbpA"
FT                   /locus_tag="VSAL_II0146"
FT                   /note="PS00039 DEAD-box subfamily ATP-dependent helicases
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00039"
FT   misc_feature    complement(171213..171236)
FT                   /gene="dbpA"
FT                   /locus_tag="VSAL_II0146"
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS             171614..173077
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0147"
FT                   /old_locus_tag="TVS3598"
FT                   /product="membrane associated GGDEF protein"
FT                   /db_xref="InterPro:IPR000160"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQC9"
FT                   /protein_id="CAQ80901.1"
FT                   /translation="MRKRSAFFYSSLIIGFLIFFLSASYIYSAYQSDRNRVIDRLQFNA
FT                   SFVDLWLTKSFHDSSLVLKDMVEDLSSGGLHSADRNNEKYQQELDYLREKEDALPNAIL
FT                   AFIIDENCILTHSKTLSGVDVSRREYCRVFKKNKERTEVVTLPLVDLAGRDVVIQGHKI
FT                   TNVNNDFLGMVGISTNLSFFNSTIRHLELPSSTGLAILSSNLKLLSAVPKGSEIIGKRL
FT                   NVSKIKPEVFETLYKNGEVVFSSDIYNDGTIDTIYARKIKDLPFIIVVTKQQDYWRTIV
FT                   SLSLLSIVGCFFVIIALLMFNLHYVKRTKEQKEKYSELAYNDYLTGVNNRRSFDLKGSQ
FT                   VLATYRRNRKPFSIIMCDIDNFKEYNDKYGHEVGDTMITSFAEACLANLRDSDILGRFG
FT                   GDEFVILLPEQSHEQAHFVAQKLQAVIRKIAVPIENIELSMTCSMGISTITDPKVTIPE
FT                   LLSIADDRLYDAKKSGRDCVKCDAIVKSN"
FT   sig_peptide     171614..171697
FT                   /locus_tag="VSAL_II0147"
FT   misc_feature    order(171629..171697,172463..172531)
FT                   /locus_tag="VSAL_II0147"
FT   misc_feature    172559..173044
FT                   /locus_tag="VSAL_II0147"
FT                   /note="HMMPfam hit to PF00990, GGDEF domain, score 8.1e-54"
FT                   /inference="protein motif:HMMPfam:PF00990"
FT   CDS             173152..173880
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0148"
FT                   /old_locus_tag="TVS3599"
FT                   /product="hypothetical protein"
FT                   /note="Similar to Bordetella bronchiseptica AlcD
FT                   UniProt:O52832 (267 aa) fasta scores: E()=2.3e-12, 25.630%
FT                   id in 238 aa. Expression may be regulated by Fur"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQD0"
FT                   /inference="similar to sequence:UniProt:O52832"
FT                   /protein_id="CAQ80902.1"
FT                   /translation="MQNNEYFESLFTLSKQVTPYLSGQVADIVLSDSNTDIHISHDNSE
FT                   VIKALYDRLSESSKEAGNAYWLTRTWDLLCWQPIYLAFISVYQLNAIPDFKNMSQSVQS
FT                   DFIAGFTFHNVDLTFGSSDEIIPLIGTQLSSLFTSYRESMSEWTRIRPGFTNHLIADGL
FT                   LNCITKLQVHQPTLSNEYLLAQALLWLNAFGLPSKHLASLKVDLLTNHLKLVRTSCCLV
FT                   YKCEGRKLCEDCPRHPNNKR"
FT   CDS             complement(173877..175025)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0149"
FT                   /old_locus_tag="TVS3600"
FT                   /product="MFS transporter"
FT                   /note="Similar to Bacillus subtilis Multidrug resistance
FT                   protein 1 Bmr UniProt:P33449 (389 aa) fasta scores:
FT                   E()=0.00092, 20.588% id in 374 aa. Expression may be
FT                   regulated by Fur"
FT                   /db_xref="InterPro:IPR011701"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQD1"
FT                   /inference="similar to sequence:UniProt:P33449"
FT                   /protein_id="CAQ80903.1"
FT                   /translation="MGIGQNGLLVSLPFLVTHSAFSLPTWSIVIAIGSFLFLPAAPFWG
FT                   RYSDKNGPKGVVFQALAGMSISFLLLLTFAFLSNGYPDLAHYWLIGLIVARLIYGCTVA
FT                   GMVPASQHWAILLCRKNNRLKAITSVSIGLSLGRLVGPILSIVLLKTGPFAPLVMMVVF
FT                   PFLALLGALWLPTPHRENKPEGTLTTKRPLIPSLTLAPYLLTGLSLCLTIALLQYSFSP
FT                   LIKSITDWPTDKISDAIGLLLTISAAITLITQILVIKKKKLQLSTMYRLGSLFLLAGFF
FT                   TFLISNLWTLGFAMALSACGAALLVPAYTSKATSMDPSNPGAVAGYISMSHTLGYGFAS
FT                   LLAYTSTLSPLYPIYICVLFSGGIMAIAFMKPQIAEVTKSSY"
FT   misc_feature    complement(order(173916..173975,173994..174062,
FT                   174147..174215,174252..174311,174369..174437,
FT                   174498..174566,174579..174638,174699..174767,
FT                   174795..174863,174900..174968))
FT                   /locus_tag="VSAL_II0149"
FT   misc_feature    complement(173982..175025)
FT                   /locus_tag="VSAL_II0149"
FT                   /note="HMMPfam hit to PF07690, Major Facilitator
FT                   Superfamily, score 1e-17"
FT                   /inference="protein motif:HMMPfam:PF07690"
FT   sig_peptide     complement(174960..175025)
FT                   /locus_tag="VSAL_II0149"
FT   CDS             175230..175997
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0150"
FT                   /old_locus_tag="TVS3601"
FT                   /product="ferrichrome transport ATP-binding protein FhuC"
FT                   /note="Expression may be regulated by Fur"
FT                   /db_xref="GOA:B6EQD2"
FT                   /db_xref="InterPro:IPR017871"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQD2"
FT                   /protein_id="CAQ80904.1"
FT                   /translation="MYQLVDASFEIDGKIILYPTNLLFPKGKVTTLLGHNGCGKSTLIK
FT                   LLSRHHNPTTGTVLFDEKAVSYFSPQEFALNVAYLPQHPPITDGVTVRELVCFGRYPWK
FT                   GAFGRYTKADYQLVDEAIEKVSLTSFNDRFVATLSGGERQRAWVAMLLAQQSHCILLDE
FT                   PTSALDVSHQYELLALIRELNTTLGLTVIMVLHDVNMAAKFSDHLIALHSGKVIAQGSP
FT                   DALMTSETLQRIYGMELALFSHPETGQPISYIP"
FT   misc_feature    175308..175871
FT                   /locus_tag="VSAL_II0150"
FT                   /note="HMMPfam hit to PF00005, ABC transporter, score
FT                   6.7e-55"
FT                   /inference="protein motif:HMMPfam:PF00005"
FT   misc_feature    175329..175352
FT                   /locus_tag="VSAL_II0150"
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    175641..175685
FT                   /locus_tag="VSAL_II0150"
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:ProSite:PS00211"
FT   CDS             176035..176925
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0151"
FT                   /old_locus_tag="TVS3602"
FT                   /product="ferrichrome-binding periplasmic protein"
FT                   /db_xref="GOA:B6EQD3"
FT                   /db_xref="InterPro:IPR008091"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQD3"
FT                   /protein_id="CAQ80905.1"
FT                   /translation="MNKLIGFIILFFISSVQAMEIKHELGTTQFTETPKKVVVLDWALT
FT                   ETVLSLGIVPLGAADVEGYQTWVMEPELNRSVMDVGSRREPNLELMTELNPDVILINQH
FT                   MSAMYEKLNTIAPTLVYTIYNDKKAPLSSAKDITAQLGVLFNKEKQSAKVIAATEQRLL
FT                   ANGDNVHRLQSNSKPFLFLRFVNDKTVRIHSEGSLTQDTIDAMGLVNAWHEPTNMWGFT
FT                   TAGVEKLAQYQQSNVLIFGPLKETERKQLTHSALWQAMAFTRTDSVYELPAIWTFGGLI
FT                   SAQRFSDHITQQLTQ"
FT   sig_peptide     176035..176088
FT                   /locus_tag="VSAL_II0151"
FT   misc_feature    176134..176856
FT                   /locus_tag="VSAL_II0151"
FT                   /note="HMMPfam hit to PF01497, Periplasmic binding protein,
FT                   score 2.7e-20"
FT                   /inference="protein motif:HMMPfam:PF01497"
FT   CDS             176925..178913
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0152"
FT                   /old_locus_tag="TVS3603"
FT                   /product="ferrichrome transport protein FhuB"
FT                   /db_xref="GOA:B6EQD4"
FT                   /db_xref="InterPro:IPR000522"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQD4"
FT                   /protein_id="CAQ80906.1"
FT                   /translation="MVVNEIEKPQGIVLRSSLFIFVVVVVLGLLQWTAPYSQGLNLLWQ
FT                   TIAHYDSANYQHLITHLTYLPRLVIAVLCGFSLAVAGCVMQFVLRNPIASPTTLGVAAG
FT                   AELGMVLGILFLPVNSAINGFIPAFLGGGIATCIVFLLSARRGFSPVHMVLAGMVISLF
FT                   FGSLNTMLLLLNEQQLASVFVWGAGTLNQNDWSSVTALIPLITVPIIAILVLSKPLSTL
FT                   QLGDSVASSIGVNVKHIKVISLTLAIFITAAVVSEVGLIGFVGIVAPAIARMFGARKLT
FT                   AQILSSGAVGSVMLLFSDLIIQPFSGVGGELLPTGAMTALLGAPFLLWLLNKNAFQSDM
FT                   KARESTQINYQHRTLHSVLMPLCLFIVVLFFVALFLGKGQCGWLLSLNPSVLELRLPRV
FT                   LVSFLAGIGLAIAGTVIQRVSTNPMASPEILGISSGAALALVLGAVFGIAVERHEQMLL
FT                   GTLGAASVTAIIWLMGRKQNFAPTQMLLTGIALSAGLDAFLRIAMSSGQDNIMALLTWL
FT                   SGSTYLVSMGDVSLLGAGVVIFGLLALCSHRWLDIIGLGETTSRSVGLSCRRVRLYLLL
FT                   LVAALTTLCTIIIGPLSFIGLLAPHMARSLHQYRASHQLLTASLIGGSLLIFADWVGRT
FT                   VWFPWQFPAGLLASLIGGAYFLYLMRK"
FT   misc_feature    order(176958..177026,177123..177191,177210..177278,
FT                   177288..177356,177375..177443,177657..177725,
FT                   177762..177830,177858..177917,177987..178055,
FT                   178113..178172,178209..178277,178290..178343,
FT                   178377..178430,178488..178556,178641..178709,
FT                   178833..178901)
FT                   /locus_tag="VSAL_II0152"
FT   misc_feature    176985..177923
FT                   /locus_tag="VSAL_II0152"
FT                   /note="HMMPfam hit to PF01032, FecCD transport family,score
FT                   3.7e-63"
FT                   /inference="protein motif:HMMPfam:PF01032"
FT   misc_feature    178011..178910
FT                   /locus_tag="VSAL_II0152"
FT                   /note="HMMPfam hit to PF01032, FecCD transport family,score
FT                   4e-53"
FT                   /inference="protein motif:HMMPfam:PF01032"
FT   misc_feature    178095..178910
FT                   /locus_tag="VSAL_II0152"
FT                   /note="HMMPfam hit to PF00950, ABC 3 transport family,score
FT                   0.00047"
FT                   /inference="protein motif:HMMPfam:PF00950"
FT   repeat_region   179232..179280
FT                   /note="VSa2"
FT   repeat_region   179232..179255
FT                   /note="IR of VSa2"
FT   repeat_region   179284..179307
FT                   /note="IR of VSa2"
FT   CDS             complement(179753..180379)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0153"
FT                   /old_locus_tag="TVS4340"
FT                   /product="hypothetical protein"
FT                   /db_xref="GOA:B6EQD5"
FT                   /db_xref="InterPro:IPR005123"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQD5"
FT                   /protein_id="CAQ80907.1"
FT                   /translation="MLLPFDFENTPLTLLNNDGNITYWDNFLSEDEATNLFNELQINSD
FT                   WKEETITLFGKEYKQPRLTCWYGEYGVVANGGYQVLTKAVPFTSQLMVLKNKIEKETGY
FT                   KFNCVLANLYRNENDGVGYHADDEAILGKNPAIASYSLGETRRFLVKHNQHKYKNISID
FT                   LKNNSLVLMDGCLQDHWKHAIPKTKRAMSARINLTFRFLGKNDSN"
FT   misc_feature    complement(179771..180067)
FT                   /locus_tag="VSAL_II0153"
FT                   /note="HMMPfam hit to PF03171, 2OG-Fe(II) oxygenase
FT                   superfamily, score 0.0066"
FT                   /inference="protein motif:HMMPfam:PF03171"
FT   CDS             complement(180443..181057)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0154"
FT                   /old_locus_tag="TVS4339"
FT                   /product="putative nitroreductase"
FT                   /db_xref="GOA:B6EQD6"
FT                   /db_xref="InterPro:IPR000415"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQD6"
FT                   /protein_id="CAQ80908.1"
FT                   /translation="MNTILDVINNRRSINNYDPSKSLTKEQIITLMTLTTKAPSAFNLQ
FT                   NWEFVAVQSKDAKVKLKALAYGQQKIEESSVTFIVCGTLHPQELLAHSLAPSLEKGIIS
FT                   SGIVDGWVNAASNMYTNNSIFQRDEAIRSASLAGMTLMLAAEGMGLSSCPMIGFDPEGV
FT                   KKAFGLSDNSVPTMLITVGYAIEDNWTQKLRRPLDEVLTIL"
FT   misc_feature    complement(180509..181036)
FT                   /locus_tag="VSAL_II0154"
FT                   /note="HMMPfam hit to PF00881, Nitroreductase family,score
FT                   2.7e-37"
FT                   /inference="protein motif:HMMPfam:PF00881"
FT   CDS             complement(181124..182107)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0155"
FT                   /old_locus_tag="TVS4338"
FT                   /product="zinc-binding dehydrogenase"
FT                   /db_xref="GOA:B6EQD7"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQD7"
FT                   /protein_id="CAQ80909.1"
FT                   /translation="MKAIIVTQAGGPEVLDIRNVTEPTTALGEVKIRVKAFGLNKAETY
FT                   YRNGAFGQINAEQAPGIEAAGEVIEDPSNTFKPGDKVVTAMGGMMFSRHGSYAEIITVN
FT                   KGNVQRIASDIGFVQLASLPQLYLTIWGALDKTLNVQSGETLLIRGATSGLGLAGLVYA
FT                   KARGLTVIATTRQASHVKRLTELGADHVVIDEGDIAETVRTLYPQGIDKALDVVGASTV
FT                   KDTMKALRPWGEVTVVGLLGGSPVIENFGLMSDLPSSIKLSFFQSGMLGTEALPLDESP
FT                   LNWIADQVYTGQMPDITSAVFEAKDIQEAHALMDSNKTVGKIVVKH"
FT   misc_feature    complement(181268..181684)
FT                   /locus_tag="VSAL_II0155"
FT                   /note="HMMPfam hit to PF00107, Zinc-binding
FT                   dehydrogenase,score 5.7e-21"
FT                   /inference="protein motif:HMMPfam:PF00107"
FT   misc_feature    complement(181775..182029)
FT                   /locus_tag="VSAL_II0155"
FT                   /note="HMMPfam hit to PF08240, Alcohol dehydrogenase
FT                   GroES-like domain, score 1.4e-06"
FT                   /inference="protein motif:HMMPfam:PF08240"
FT   CDS             182270..183169
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0156"
FT                   /old_locus_tag="TVS4337"
FT                   /product="HTH-type transcriptional regulator, LysR family"
FT                   /db_xref="GOA:B6EQD8"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQD8"
FT                   /protein_id="CAQ80910.1"
FT                   /translation="MDLNSLNIFVNVVQHGSFSAASKIMNIPVATVSRRVSELENQLDQ
FT                   QLLIRTTRKLSVTHVGQLLYQRASSGLNEIFDAEQAINEEQEDLKGQLRISIPPALYVF
FT                   DDMFHQFNNTYPLIQLDIFSTVRKTDFIDDDVDIVIRVGKVNYQSAIARHLGKYRHVMV
FT                   CSQKFINKYGIPKDPTALANLPIAAWRFGHGPITWQLGEHCIEITPKFSSSDYVHSLSA
FT                   IRTGEMLGELPPMLANPLLRSGEFVEVLAEYPLPEVDLHIIYPSRKHLSRLSKVFIDDF
FT                   IQFCRTHQKGDSLFNISL"
FT   misc_feature    182276..182455
FT                   /locus_tag="VSAL_II0156"
FT                   /note="HMMPfam hit to PF00126, Bacterial regulatory
FT                   helix-turn-helix, score 6.6e-17"
FT                   /inference="protein motif:HMMPfam:PF00126"
FT   misc_feature    182315..182380
FT                   /locus_tag="VSAL_II0156"
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1377.000, SD 3.88 at aa 16-37, sequence
FT                   GSFSAASKIMNIPVATVSRRVS"
FT   misc_feature    182318..182410
FT                   /locus_tag="VSAL_II0156"
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00044"
FT   misc_feature    182525..183127
FT                   /locus_tag="VSAL_II0156"
FT                   /note="HMMPfam hit to PF03466, LysR substrate binding
FT                   domain, score 1.9e-28"
FT                   /inference="protein motif:HMMPfam:PF03466"
FT   CDS             complement(join(183226..184728,185736..186026))
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0157"
FT                   /old_locus_tag="TVS4334"
FT                   /product="ABC transporter, ATP-binding component
FT                   (pseudogene)"
FT                   /note="Similar to Pseudomonas aeruginosa Hydrophobic
FT                   compound transport factor HcuC UniProt:Q76LI0 (588 aa)
FT                   fasta scores: E()=1.1e-95, 55.575% id in 565 aa. CDS is
FT                   disrupted by the insertion of an IS element after codon 96"
FT                   /db_xref="PSEUDO:CAQ80911.1"
FT                   /inference="similar to sequence:UniProt:Q76LI0"
FT   misc_feature    complement(183319..183873)
FT                   /locus_tag="VSAL_II0157"
FT                   /note="HMMPfam hit to PF00005, ABC transporter, score
FT                   3.1e-67"
FT                   /inference="protein motif:HMMPfam:PF00005"
FT   misc_feature    complement(183496..183540)
FT                   /locus_tag="VSAL_II0157"
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:ProSite:PS00211"
FT   misc_feature    complement(183763..183795)
FT                   /locus_tag="VSAL_II0157"
FT                   /note="PS00178 Aminoacyl-transfer RNA synthetases class-I
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00178"
FT   misc_feature    complement(183829..183852)
FT                   /locus_tag="VSAL_II0157"
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    complement(order(184066..184134,184177..184245,
FT                   184432..184485,184513..184581))
FT                   /locus_tag="VSAL_II0157"
FT   misc_feature    complement(order(184096..184728,185739..185918))
FT                   /locus_tag="VSAL_II0157"
FT                   /note="HMMPfam hit to PF00664, ABC transporter
FT                   transmembrane region, score 3.2e-42"
FT                   /inference="protein motif:HMMPfam:PF00664"
FT   repeat_region   184730..185734
FT                   /note="VSa6"
FT   repeat_region   184730..184748
FT                   /note="IR of VSa6"
FT   CDS             184826..185707
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0158"
FT                   /old_locus_tag="TVS4335"
FT                   /product="transposase"
FT                   /db_xref="GOA:B6EH02"
FT                   /db_xref="InterPro:IPR002559"
FT                   /db_xref="UniProtKB/TrEMBL:B6EH02"
FT                   /protein_id="CAQ80912.1"
FT                   /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC
FT                   MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK
FT                   GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS
FT                   LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE
FT                   ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI
FT                   KLSECEFELILA"
FT   misc_feature    185153..185647
FT                   /locus_tag="VSAL_II0158"
FT                   /note="HMMPfam hit to PF01609, Transposase DDE domain,score
FT                   9.3e-30"
FT                   /inference="protein motif:HMMPfam:PF01609"
FT   repeat_region   185716..185734
FT                   /note="IR of VSa6"
FT   misc_feature    complement(order(185736..185801,185844..185912))
FT                   /locus_tag="VSAL_II0157"
FT   CDS             complement(186185..187057)
FT                   /transl_table=11
FT                   /gene="cyoE"
FT                   /locus_tag="VSAL_II0159"
FT                   /old_locus_tag="TVS4333"
FT                   /product="protoheme IX farnesyltransferase (cytochrome o
FT                   ubiquinol oxidase C subunit IV)"
FT                   /EC_number="2.5.1.-"
FT                   /db_xref="GOA:B6EQE1"
FT                   /db_xref="InterPro:IPR000537"
FT                   /db_xref="UniProtKB/Swiss-Prot:B6EQE1"
FT                   /protein_id="CAQ80913.1"
FT                   /translation="MFKEYVSLTKPGIIMGNLISVLAGYFLAAKSESITLSLLVYTMLG
FT                   VALVIASGCVVNNIFDRDIDAKMSRTRNRAIVTGSINIEFAFLFAIIMLLIGTGLLYKM
FT                   ANPLSAVMVLLGYVFYVFFYTMWYKRTSVYGTLVGSVSGAIPPLVGYLAVTNYLSLEAV
FT                   LLFGLFCLWQMPHSYAIAMFRMKDYQQANIPVLPLVKGIQKARQHIMIYVLVFSVVALG
FT                   LYAFGHTGYEYLAVVAISCYGWFKVTYRNMDESNYVQWSKSVFKTSLLAITAFSTVLGI
FT                   ELLPFSITF"
FT   misc_feature    complement(order(186191..186259,186317..186370,
FT                   186380..186433,186518..186586,186596..186664,
FT                   186683..186736,186764..186832,186890..186958,
FT                   186971..187039))
FT                   /gene="cyoE"
FT                   /locus_tag="VSAL_II0159"
FT   misc_feature    complement(186209..187018)
FT                   /gene="cyoE"
FT                   /locus_tag="VSAL_II0159"
FT                   /note="HMMPfam hit to PF01040, UbiA prenyltransferase
FT                   family, score 4.1e-65"
FT                   /inference="protein motif:HMMPfam:PF01040"
FT   misc_feature    complement(186821..186889)
FT                   /gene="cyoE"
FT                   /locus_tag="VSAL_II0159"
FT                   /note="PS00943 UbiA prenyltransferase family signature."
FT                   /inference="protein motif:ProSite:PS00943"
FT   CDS             complement(187066..187395)
FT                   /transl_table=11
FT                   /gene="cyoD"
FT                   /locus_tag="VSAL_II0160"
FT                   /old_locus_tag="TVS4332"
FT                   /product="cytochrome o ubiquinol oxidase subunit CyoD"
FT                   /db_xref="GOA:B6EQE2"
FT                   /db_xref="InterPro:IPR014210"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQE2"
FT                   /protein_id="CAQ80914.1"
FT                   /translation="MANQFVSGSDQQDLGAKGYITGFIASLILTMIPFYFAYTGVLSRE
FT                   VTIVVLILSAIAQLVVHLFYFLHMDSTEKGRFNMLSFVFTAVIVFIVIAGSIWIMWNLN
FT                   NNMMM"
FT   misc_feature    complement(order(187093..187161,187189..187257,
FT                   187270..187338))
FT                   /gene="cyoD"
FT                   /locus_tag="VSAL_II0160"
FT   misc_feature    complement(187099..187347)
FT                   /gene="cyoD"
FT                   /locus_tag="VSAL_II0160"
FT                   /note="HMMPfam hit to PF03626, Prokaryotic Cytochrome C
FT                   oxidase subunit IV, score 3.2e-28"
FT                   /inference="protein motif:HMMPfam:PF03626"
FT   CDS             complement(187395..188003)
FT                   /transl_table=11
FT                   /gene="cyoC"
FT                   /locus_tag="VSAL_II0161"
FT                   /old_locus_tag="TVS4331"
FT                   /product="cytochrome o ubiquinol oxidase subunit III"
FT                   /EC_number="1.10.3.-"
FT                   /note="Similar to Pseudomonas putida CyoC UniProt:Q6S4M5
FT                   (208 aa) fasta scores: E()=1.5e-48, 65.128% id in 195 aa"
FT                   /db_xref="GOA:B6EQE3"
FT                   /db_xref="InterPro:IPR014206"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQE3"
FT                   /inference="similar to sequence:UniProt:Q6S4M5"
FT                   /protein_id="CAQ80915.1"
FT                   /translation="MYANPTAEHKHDDHDHHDANEMKQYGFWIYLMSDCILFGSLFATY
FT                   AVLVNATAGGPSGKDIFELPFVFVETMLLLLSSITFGFGIIAMKREDLAGLKRWLLITA
FT                   LLGLGFISMEVYEFNHLIGEGFGPQRSAFLSAFFTLVGTHGLHVTFGLIWLSVCYFQLN
FT                   TKGLNDLMKGRFYCLSLFWHFLDIVWICVFTIVYLLGVI"
FT   misc_feature    complement(187401..187979)
FT                   /gene="cyoC"
FT                   /locus_tag="VSAL_II0161"
FT                   /note="HMMPfam hit to PF00510, Cytochrome c oxidase subunit
FT                   III, score 5.7e-06"
FT                   /inference="protein motif:HMMPfam:PF00510"
FT   misc_feature    complement(order(187401..187469,187530..187598,
FT                   187656..187709,187746..187814,187857..187925))
FT                   /gene="cyoC"
FT                   /locus_tag="VSAL_II0161"
FT   CDS             complement(join(187993..189759,189761..190036))
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="cyoB"
FT                   /locus_tag="VSAL_II0162"
FT                   /old_locus_tag="TVS4329"
FT                   /product="cytochrome o ubiquinol oxidase subunit I
FT                   (ubiquinol oxidase subunit 1) (pseudogene)"
FT                   /EC_number="1.10.3.-"
FT                   /note="Similar to Escherichia coli Ubiquinol oxidase
FT                   subunit 1 CyoB UniProt:P0ABI8 (663 aa) fasta scores:
FT                   E()=1.9e-195, 74.324% id in 666 aa. CDS contains a
FT                   frameshift after codon 92. The sequence has been checked
FT                   and is believed to be correct"
FT                   /db_xref="PSEUDO:CAQ80916.1"
FT                   /inference="similar to sequence:UniProt:P0ABI8"
FT   misc_feature    complement(order(188140..188244,188497..188565,
FT                   188608..188667,188728..188796,188824..188892,
FT                   188929..188997,189040..189108,189145..189213,
FT                   189271..189339,189400..189468,189550..189618,
FT                   189637..189705,189800..189868,189926..189994))
FT                   /gene="cyoB"
FT                   /locus_tag="VSAL_II0162"
FT   misc_feature    complement(order(188521..189759,189761..189898))
FT                   /gene="cyoB"
FT                   /locus_tag="VSAL_II0162"
FT                   /note="HMMPfam hit to PF00115, Cytochrome C and Quinol
FT                   oxidase polypeptide, score 5.7e-252"
FT                   /inference="protein motif:HMMPfam:PF00115"
FT   misc_feature    complement(189034..189198)
FT                   /gene="cyoB"
FT                   /locus_tag="VSAL_II0162"
FT                   /note="PS00077 Heme-copper oxidase catalytic subunit,copper
FT                   B binding region signature."
FT                   /inference="protein motif:ProSite:PS00077"
FT   CDS             complement(190046..190969)
FT                   /transl_table=11
FT                   /gene="cyoA"
FT                   /locus_tag="VSAL_II0163"
FT                   /old_locus_tag="TVS4328"
FT                   /product="cytochrome o ubiquinol oxidase subunit II
FT                   (ubiquinol oxidase subunit 2 precursor)"
FT                   /EC_number="1.10.3.-"
FT                   /note="Expression may be regulated by Fur"
FT                   /db_xref="GOA:B6EQE5"
FT                   /db_xref="InterPro:IPR012141"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQE5"
FT                   /protein_id="CAQ80917.1"
FT                   /translation="MEVLKYKNILSRGGLLGSILFISGCNSALLDPKGIVGIQEKELII
FT                   TALLLMLIVVIPVILMTVYFSYKYRSSNTEAKYEPEWAHSTKVEVIVWAVPIIIIVILG
FT                   IITWRTTHELEQSKPLVSDVKPMTIEVISLDWKWLFIYPEQGIATLNYVVFPKDVPVQF
FT                   KVTSDNIMNSFFIPRLGSQIYAMPGMMTKVHLIANEANDYKGISASYSGAGFSGMKFTA
FT                   HVTETRKEFGEWAKSLKHKDGALVMSDFDAYRELAKPSENVPVTYYSSVPDHLFSDVVK
FT                   QYRGSLNSSEKSMGKEHHMDMANSKE"
FT   misc_feature    complement(190106..190249)
FT                   /gene="cyoA"
FT                   /locus_tag="VSAL_II0163"
FT                   /note="HMMPfam hit to PF06481, COX Aromatic Rich
FT                   Motif,score 1.4e-11"
FT                   /inference="protein motif:HMMPfam:PF06481"
FT   misc_feature    complement(190295..190591)
FT                   /gene="cyoA"
FT                   /locus_tag="VSAL_II0163"
FT                   /note="HMMPfam hit to PF00116, Cytochrome C oxidase subunit
FT                   II, periplasmic, score 2.1e-06"
FT                   /inference="protein motif:HMMPfam:PF00116"
FT   misc_feature    complement(order(190640..190708,190769..190837,
FT                   190880..190933))
FT                   /gene="cyoA"
FT                   /locus_tag="VSAL_II0163"
FT   sig_peptide     complement(190880..190969)
FT                   /gene="cyoA"
FT                   /locus_tag="VSAL_II0163"
FT   misc_feature    complement(190895..190927)
FT                   /gene="cyoA"
FT                   /locus_tag="VSAL_II0163"
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   CDS             191627..192361
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0164"
FT                   /old_locus_tag="TVS4327"
FT                   /product="membrane protein"
FT                   /db_xref="InterPro:IPR011435"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQE6"
FT                   /protein_id="CAQ80918.1"
FT                   /translation="MNAIKAMLTAILGSFRDLLPIILVIAFFQLVVLQEPLPNLGSILF
FT                   GLLLVVLGLTFFIFGLEMGLFPIGESMAHAFARKGSVAWLLLFSFCLGFGTTIAEPALT
FT                   AVAAEAAEVAAEGGMIPHTEDEMDHYANGLRLTVALSVGFAIVIGVLRILKGWPIHIMI
FT                   IGGYITVVALTWFAPENIIGIAYDSGGVTTSTITVPLVTALGVGLASTIKGRSPMLDGF
FT                   GLIAFASLLPMIFVMIYGMVLA"
FT   misc_feature    order(191660..191728,191741..191809,191870..191938,
FT                   192011..192079,192092..192160,192203..192262,
FT                   192287..192355)
FT                   /locus_tag="VSAL_II0164"
FT   misc_feature    191675..192358
FT                   /locus_tag="VSAL_II0164"
FT                   /note="HMMPfam hit to PF07556, Protein of unknown function
FT                   (DUF1538), score 1.3e-128"
FT                   /inference="protein motif:HMMPfam:PF07556"
FT   CDS             192358..193143
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0165"
FT                   /old_locus_tag="TVS4326"
FT                   /product="membrane protein"
FT                   /db_xref="InterPro:IPR011435"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQE7"
FT                   /protein_id="CAQ80919.1"
FT                   /translation="MNNLTLFIDTFLSTIRDVLPIVVIIFDFQFAVLKKPIANLPKVIL
FT                   GFFYVILGLSLFLMGLELALFPLGESMATQLTAPDFIYEGKDLLIQTFNWVDYYWVYIF
FT                   AATIGFSTTIAEPSLIAVAIKANAVSGGSISVNGLRIAVALGVAFGISLGSYRIVVGDP
FT                   IHYYIMVGYVIVVIQTFYAPKMIIPLAYDSGGVTTSTVTVPLVTALGLGLASTVPGRNP
FT                   MIDGFGLIAFASLFPIISVMAYAQISAYRNRSKNTELID"
FT   misc_feature    order(192385..192453,192487..192555,192658..192726,
FT                   192763..192831,192844..192903,192940..193008,
FT                   193036..193104)
FT                   /locus_tag="VSAL_II0165"
FT   misc_feature    192406..193104
FT                   /locus_tag="VSAL_II0165"
FT                   /note="HMMPfam hit to PF07556, Protein of unknown function
FT                   (DUF1538), score 5.5e-117"
FT                   /inference="protein motif:HMMPfam:PF07556"
FT   CDS             193158..193508
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0166"
FT                   /old_locus_tag="TVS4325"
FT                   /product="hypothetical protein"
FT                   /db_xref="GOA:B6EQE8"
FT                   /db_xref="InterPro:IPR002187"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQE8"
FT                   /protein_id="CAQ80920.1"
FT                   /translation="MRFKLLLAFVEESKTEAVLDAARNAGATGATVINHARGEGLNKKT
FT                   TFFGLTLEVQKDVLLFVVEEHLARSILETINQVGEFDTESGQGIAIQIDIEDAVGVAHQ
FT                   VETLTKAVGEKL"
FT   CDS             193505..193903
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0167"
FT                   /old_locus_tag="TVS4324"
FT                   /product="hypothetical protein"
FT                   /db_xref="InterPro:IPR000644"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQE9"
FT                   /protein_id="CAQ80921.1"
FT                   /translation="MNKIKVENVMSNTYVMVDGLMTVAEGIQLAKQKQVKALIVKKRDE
FT                   EDEYGIVLMNDIAKKVLAQNRPTDRTNIYEIMTKPALSVSPDMNVKYCARLFERFGISR
FT                   APVIKHGEIVGMVSYNNIVLNGMAEVNP"
FT   misc_feature    193532..193885
FT                   /locus_tag="VSAL_II0167"
FT                   /note="HMMPfam hit to PF00571, CBS domain pair, score
FT                   3.3e-16"
FT                   /inference="protein motif:HMMPfam:PF00571"
FT   CDS             complement(193964..195088)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0168"
FT                   /old_locus_tag="TVS4323"
FT                   /product="putative exported protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQF0"
FT                   /protein_id="CAQ80922.1"
FT                   /translation="MNKLTALLVLCLMTPVSANAQDEVSKRDLAQELSRAFPQLEKSLK
FT                   GTINQYQLSASLSDLPIQPKPQARTFMAAMSAANDTEIESRGLQQYTDELLELRLADPS
FT                   MLARWQAGQSPLFAFEPEGAESEWQYIEAFDVDGNVHYLDIYDIPERPVLVVDTNNREE
FT                   LKAGLALMRDELKALQEQPKAQKIVRYSMMQSTQEPTEINTTILKKIQLKDDHEPWISG
FT                   KAEVYAIVSGVSPDRDEPTIDLIEMPYLDYAEQSYPANQIMIFWQRYRWGAADIILMEQ
FT                   DDKTDYKELAQTILKAASDFLATIPDKEAQAYLIIPQMTSAIIALLPDDLFINDDDFVD
FT                   VFYTIMKDTEYTDHSGAGNNAVADFAPLIIQKTE"
FT   sig_peptide     complement(195029..195088)
FT                   /locus_tag="VSAL_II0168"
FT   CDS             195408..195875
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0169"
FT                   /old_locus_tag="TVS4322"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQF1"
FT                   /protein_id="CAQ80923.1"
FT                   /translation="MTLDTWLISISTWYEAKQYDQIETLEALLYSAPHSVWGPELTDDQ
FT                   SKAIACWLDGCLRVFEHTKYHNAKKAYHTLQYASAKLEVTTFNPATDIDIKDWCLKRLQ
FT                   HLTVLSLEFCNQQQDQSTWHEKAHSLIEMHVKLMASLSWNESRAPNLIFPH"
FT   CDS             complement(195935..197566)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0170"
FT                   /old_locus_tag="TVS4321"
FT                   /product="methyl-accepting chemotaxis protein"
FT                   /note="Similar to Vibrio cholerae Toxin coregulated pilus
FT                   biosynthesis protein I TcpI UniProt:P29486 (620 aa) fasta
FT                   scores: E()=1.3e-31, 37.203% id in 379 aa"
FT                   /db_xref="GOA:B6EQF2"
FT                   /db_xref="InterPro:IPR007891"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQF2"
FT                   /inference="similar to sequence:UniProt:P29486"
FT                   /protein_id="CAQ80924.1"
FT                   /translation="MNKLANLPTKLLMIIAFFVTFISFMSIYVSVDNSNEEIEKNSDAV
FT                   EKTYTIMGLVQHSLEQVINIETGFRGYMLTNEKSSLMPYEMGVSSINSDLETLSTFFSN
FT                   NPTTDQTNRLNTLIKTYSNWKENVIDQGIEIRNTKSLSEALEFIDKADGEKYVNEIRIV
FT                   FDKISAEEKKFLAQRTELLDESLSGLISITLILTFIGCFCSAVLFFIINNIINNNVNEM
FT                   SSAIALLADGVLKPLPIVPSKNEFFKIKQEFNKSIGRLSNLINELTISADNTSSSSEEL
FT                   TAVMQNTAKNTQSELAQVEEISTAISELSSTSKEVSSNAVQAEDETRKAIDNVTEGNKA
FT                   LEQSILLTQNINESVQETAYMIEELKNSAIDIGEVTNVISSISEQTNLLALNAAIEAAR
FT                   AGEQGRGFAVVADEVRNLAAKTQESTKNIQGIISTLQAQSEKANDNMVANVNSIQESVA
FT                   LSHNVKASFDDIAQSVQAISDINTLVATASQEQYNVTEDIAKNTTRTFDLVNENVAAVN
FT                   QTQQAAKELALLAVKQSEELSFFKVS"
FT   misc_feature    complement(195938..196732)
FT                   /locus_tag="VSAL_II0170"
FT                   /note="HMMPfam hit to PF00015, Methyl-accepting chemotaxis
FT                   protein (MCP) s, score 2.8e-46"
FT                   /inference="protein motif:HMMPfam:PF00015"
FT   misc_feature    complement(196781..196990)
FT                   /locus_tag="VSAL_II0170"
FT                   /note="HMMPfam hit to PF00672, HAMP domain, score 0.00016"
FT                   /inference="protein motif:HMMPfam:PF00672"
FT   misc_feature    complement(order(196934..197002,197480..197548))
FT                   /locus_tag="VSAL_II0170"
FT   misc_feature    complement(197024..197449)
FT                   /locus_tag="VSAL_II0170"
FT                   /note="HMMPfam hit to PF05227, CHASE3 domain, score 2e-12"
FT                   /inference="protein motif:HMMPfam:PF05227"
FT   sig_peptide     complement(197474..197566)
FT                   /locus_tag="VSAL_II0170"
FT   CDS             complement(197679..197969)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0171"
FT                   /old_locus_tag="TVS4320"
FT                   /product="putative membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQF3"
FT                   /protein_id="CAQ80925.1"
FT                   /translation="MSNKHILVANSETSFLDLCTNNLVNGCDVYCTFEVCDEDMGWMKH
FT                   NLKRSHGHDLLLRKIPQRKAKSNGLIKKSKQYYMAIFLMVLFCFFIRLLTD"
FT   misc_feature    complement(197688..197741)
FT                   /locus_tag="VSAL_II0171"
FT   CDS             complement(197990..198322)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0172"
FT                   /old_locus_tag="TVS4319"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQF4"
FT                   /protein_id="CAQ80926.1"
FT                   /translation="MIINYSGIIRLKSEDMMFISGEKKHQCSLSEFMVESFYFSKKDHF
FT                   VNIKLHRHIELKPICFSGEEIETVIICVNVKYCLYNRRVLVLEFDRDCKKEIEVSLYNF
FT                   NFSMDF"
FT   repeat_region   198325..200639
FT                   /note="VSa2"
FT   repeat_region   198325..198348
FT                   /note="IR of VSa2"
FT   CDS             198406..198720
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0173"
FT                   /old_locus_tag="TVS4318"
FT                   /product="transposase"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN3"
FT                   /protein_id="CAQ80927.1"
FT                   /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA
FT                   RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS
FT                   "
FT   CDS             198717..199064
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0174"
FT                   /old_locus_tag="TVSb0077"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR008878"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN4"
FT                   /protein_id="CAQ80928.1"
FT                   /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI
FT                   FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL
FT                   GHQPVHYQTTL"
FT   CDS             199136..200623
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0175"
FT                   /old_locus_tag="TVS4315"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR004291"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGR2"
FT                   /protein_id="CAQ80929.1"
FT                   /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS
FT                   ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC
FT                   CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK
FT                   GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL
FT                   HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY
FT                   HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKGKTGSADWVLS
FT                   KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT
FT                   LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA
FT                   KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV"
FT   repeat_region   200616..200639
FT                   /note="IR of VSa2"
FT   CDS             complement(200732..202702)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0176"
FT                   /old_locus_tag="TVS4314"
FT                   /product="hypothetical protein"
FT                   /db_xref="InterPro:IPR012656"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQF8"
FT                   /protein_id="CAQ80930.1"
FT                   /translation="MMQILSESEIVNKIQNLIPFEATLADGGLTLRISEYQPYLATAVH
FT                   NGHEMRASLSELCTLSDSERYVQESPYSGDFISSLPIVLLALDSRYEYDIDKTEATCID
FT                   NVWTSPLAEKESELSKSKHATYYRILHCLLTTLENEFGICSVYDLRSYNYQSTDEAIPT
FT                   FNVGTKQINARRWRKKINDLLDRLNHVELPNIDVDAQENSVCTGLGYQATFVKEHFSKT
FT                   VIFPLGVKKIYMDESRGESFPLVIEKLKEELKTVISGHVAAMLSRRSGAKKKVTPGQIL
FT                   VSTLSAEAYKVDRALFKIAKGINTLSYINPSNLRQEKRRFLTKPFTYEPNFTYKQLDID
FT                   PYLFREQLYRLPVDDIRDADLQKLYRKVIDQLAVRIDLLTSIGTDDFLYNSLRYYGQPD
FT                   DQDIANANFILHAKEYDEPEAQTVTPKEAMAAFHEAADEYGFKCKVIGSTQLIARAMVS
FT                   GKTLKVNTGVMFGKKDLDALIHHELGVHMVTSINAEQQPLKILTLGLPGNTHTQEGLAI
FT                   LCEHLSGSFNLGRLKTLALRVIAVHKMVKGDSFSETFHCLKHDYDQSDDSAFTITARAY
FT                   RGGGFTKDYLYLKGLRDALHMYEKEDLTSLFLGKTGFEFKPILDELIARNILPAPKFIP
FT                   KALSISREKDPVLDWLMKSIR"
FT   misc_feature    complement(200735..201751)
FT                   /locus_tag="VSAL_II0176"
FT                   /note="HMMPfam hit to PF08014, Domain of unknown function
FT                   (DUF1704), score 2.2e-176"
FT                   /inference="protein motif:HMMPfam:PF08014"
FT   CDS             complement(202973..203296)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0177"
FT                   /old_locus_tag="TVS4313"
FT                   /product="hypothetical protein"
FT                   /db_xref="InterPro:IPR007335"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQF9"
FT                   /protein_id="CAQ80931.1"
FT                   /translation="MRTSSKFYDDARFKRGFSRSGFTIKEAAILESYGRTMKALSEGSM
FT                   VPISDRESIFLQEVASEQKSTSEFTLCWLKYLKLSNTKPKLYTLCGTQRPVNTDGHSEG
FT                   DDD"
FT   misc_feature    complement(202979..203296)
FT                   /locus_tag="VSAL_II0177"
FT                   /note="HMMPfam hit to PF04219, Protein of unknown function,
FT                   DUF, score 1.8e-15"
FT                   /inference="protein motif:HMMPfam:PF04219"
FT   CDS             203420..204292
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0178"
FT                   /old_locus_tag="TVS4312"
FT                   /product="HTH-type transcriptional regulator, LysR family"
FT                   /note="Similar to Escherichia coli HTH-type transcriptional
FT                   regulator HdfR UniProt:P0A8R9 (279 aa) fasta scores:
FT                   E()=2.5e-34, 41.429% id in 280 aa"
FT                   /db_xref="GOA:B6EQG0"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQG0"
FT                   /inference="similar to sequence:UniProt:P0A8R9"
FT                   /protein_id="CAQ80932.1"
FT                   /translation="MNSLDTDLLKTFLEVTKTRHFGRAAEHLFLTQSAVSFRVRQLESQ
FT                   LGNPLFTRQRHNVQLTAAGERLLPYAEAILQTWGRAKQDVALTEDYNSQIAIGASPLFW
FT                   EFDGISDWINGIYASIPGLALRLESIRRQDLSKSLLDKNVDLFITSEPPKIDGLGVLKI
FT                   RDYQLQLVSHDPDCQLKSSQTLPLVYLDWGAKFAIQHSKIPELQRTPILHTHSSRMALD
FT                   YLIANSGVGYLPAPVVNQSIEDGDLYVVDNAPIMEQHLYLVWKEKSEKSELIERILNIK
FT                   PNNVAESVQ"
FT   misc_feature    203435..203614
FT                   /locus_tag="VSAL_II0178"
FT                   /note="HMMPfam hit to PF00126, Bacterial regulatory
FT                   helix-turn-helix, score 1.8e-18"
FT                   /inference="protein motif:HMMPfam:PF00126"
FT   misc_feature    203474..203539
FT                   /locus_tag="VSAL_II0178"
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1241.000, SD 3.41 at aa 19-40, sequence
FT                   RHFGRAAEHLFLTQSAVSFRVR"
FT   misc_feature    203477..203569
FT                   /locus_tag="VSAL_II0178"
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00044"
FT   misc_feature    203681..204277
FT                   /locus_tag="VSAL_II0178"
FT                   /note="HMMPfam hit to PF03466, LysR substrate binding
FT                   domain, score 1.5e-08"
FT                   /inference="protein motif:HMMPfam:PF03466"
FT   CDS             complement(204363..205406)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0179"
FT                   /old_locus_tag="TVS4311"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="GOA:B6EQG1"
FT                   /db_xref="InterPro:IPR010914"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQG1"
FT                   /protein_id="CAQ80933.1"
FT                   /translation="MNLLPSLPQLGWRPFFQQQLTLEELTELRIGRVIEQHRSGVVVLS
FT                   EQGQFNLLQTPNSDRVCVGDWVLFDEQLKLERGLERQSLFQRKAPGSKVDNQLIASNVD
FT                   SLFIVCSLNNDFNLSRIERYLAMAKEADVEPVIILTKADLCDDSEEKRYQVQTLNRFMM
FT                   VHAINALDSEHIKELTGYCAQGKTIALLGSSGVGKSTLVNALMGEDAQATGGIREDDSK
FT                   GRHTTTSRAVKWMPQGGLLMDTPGMRELQLSDCEQGVSDTFHEITYFIDQCRFGNCTHN
FT                   NEPGCAIQKALNEGELESRRFVSYQKLMREQALNSETLAEKRLKDRALGRMIHSVQTES
FT                   RQRKKGY"
FT   misc_feature    complement(204477..205319)
FT                   /locus_tag="VSAL_II0179"
FT                   /note="HMMPfam hit to PF03193, Protein of unknown function,
FT                   DUF258, score 3e-105"
FT                   /inference="protein motif:HMMPfam:PF03193"
FT   misc_feature    complement(204810..204833)
FT                   /locus_tag="VSAL_II0179"
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    complement(204846..204869)
FT                   /locus_tag="VSAL_II0179"
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   CDS             205699..207045
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0180"
FT                   /old_locus_tag="TVS4310"
FT                   /product="divalent cation transporter, putative magnesium
FT                   transporter"
FT                   /db_xref="GOA:B6EQG2"
FT                   /db_xref="InterPro:IPR006668"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQG2"
FT                   /protein_id="CAQ80934.1"
FT                   /translation="MNEFQDLSSQIDPLFNADPQQQVELLGEYVEHGLDNGSFARILEA
FT                   FPVDQRVQLWRRLPLEMHIDVLTEMRADARVAILEALSEAELNFTLAKLDNLSLIEWAE
FT                   SLPEDIFSLALQLINRDELDLYDDAKQYEDDEVGHWADRKIATLPFNVSVGRAKKLLKT
FT                   NLFESHQYMYLINRAHKFHGIVQYTDILIADDSIKINTLKIEDCLALNVHQPLSESIEA
FT                   IEHSVVPSVAIIDDENTLIGQLDWQFAINTQREIYETRLMAGTGMDEGDDLFSPIFRSS
FT                   KKRGLWLGINLLTAILASITIGLFEDVITQVVALAVLMPIVASMGGIAGSQTLTLMVRA
FT                   MALNQITPGNRFTLLKNELGIGSINGLLWSLIIGGLAGAWFQSFTLGATISLAIIINII
FT                   TAALFGVLIPITLDKFKLDPALAGSVILTTVTDVVGFFAFLGTASLVMM"
FT   misc_feature    205756..206109
FT                   /locus_tag="VSAL_II0180"
FT                   /note="HMMPfam hit to PF03448, MgtE intracellular
FT                   domain,score 1.4e-19"
FT                   /inference="protein motif:HMMPfam:PF03448"
FT   misc_feature    order(206554..206613,206632..206700,206773..206841,
FT                   206860..206928,206971..207039)
FT                   /locus_tag="VSAL_II0180"
FT   misc_feature    206650..207027
FT                   /locus_tag="VSAL_II0180"
FT                   /note="HMMPfam hit to PF01769, Divalent cation transporter,
FT                   score 9.8e-15"
FT                   /inference="protein motif:HMMPfam:PF01769"
FT   CDS             207607..208383
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0181"
FT                   /old_locus_tag="TVS4309"
FT                   /product="ABC-type glycine betaine transport
FT                   system,substrate binding domain"
FT                   /db_xref="GOA:B6EQG3"
FT                   /db_xref="InterPro:IPR007210"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQG3"
FT                   /protein_id="CAQ80935.1"
FT                   /translation="MKNKITLGVTNLSFHQLTASIITHVLVDMGFEVDRIYSSHQDNFE
FT                   KLKLGDIDMLASAWLPSSHGIYKSDVEETVELLELGLHYKPYALWGVPDYIPEESVSEI
FT                   NDLLKPEVLSCMNKNIQGINPGAGITRFSIKMMDAYDLSHAGYIFHTGSEEDCFAAFEQ
FT                   AVENKEWVIVPLWKPQFLHHKYTIREISEPKGLLGIVDRAVLLLRQDRATYFTQEQIRR
FT                   LDSLTFSNEIIAALDYQVSREGKDIDEVTKQWLNNQ"
FT   sig_peptide     207607..207663
FT                   /locus_tag="VSAL_II0181"
FT   misc_feature    207613..208377
FT                   /locus_tag="VSAL_II0181"
FT                   /note="HMMPfam hit to PF04069, Substrate binding domain of
FT                   ABC-type glycine, score 1.4e-55"
FT                   /inference="protein motif:HMMPfam:PF04069"
FT   CDS             complement(208504..209349)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0182"
FT                   /old_locus_tag="TVS4308"
FT                   /product="universal stress protein"
FT                   /db_xref="GOA:B6EQG4"
FT                   /db_xref="InterPro:IPR014729"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQG4"
FT                   /protein_id="CAQ80936.1"
FT                   /translation="MKNIIACIDGSTFTFATCEASAWVAKKVDAPLVLLHALDKTMRPV
FT                   VSELSGQIGLGSQEELLNELADLDEARSKIALKHGNKLLEEAKTWASKEGVSDVRKLQR
FT                   HGNLLDSLIDLENEIRVLVIGKSGEESSINKTIGSQLESVIRSISAHILVVSEPFAVPN
FT                   SYLIAFDGSPTSHKLIEKAMKTPLLVGLECHLVMVDDSGNKSTEFEQAATQLRDAGLSV
FT                   NESILAGSVDEALLTYQQQHQIGLFVMGAYGHSKLRQFFVGSNTTEVLAKSKVPILVIR
FT                   "
FT   misc_feature    complement(208507..208860)
FT                   /locus_tag="VSAL_II0182"
FT                   /note="HMMPfam hit to PF00582, Universal stress protein
FT                   family, score 3.1e-15"
FT                   /inference="protein motif:HMMPfam:PF00582"
FT   misc_feature    complement(208882..209349)
FT                   /locus_tag="VSAL_II0182"
FT                   /note="HMMPfam hit to PF00582, Universal stress protein
FT                   family, score 4.8e-12"
FT                   /inference="protein motif:HMMPfam:PF00582"
FT   CDS             complement(209361..210848)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0183"
FT                   /old_locus_tag="TVS4307"
FT                   /product="putative sulfate transporter"
FT                   /db_xref="GOA:B6EQG5"
FT                   /db_xref="InterPro:IPR011547"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQG5"
FT                   /protein_id="CAQ80937.1"
FT                   /translation="MLKNFKIDWMSNVRGDLLAGIVVALALIPEVIAFSIIAGVDPKIG
FT                   LYASFSISVVIAFTGGRSGMISAATGAMALLMVTLVKEHGLEYLLAVTVLTGILQILAG
FT                   YLKLGSLMRFVSRSVVTGFVNALAILIFMAQLPELTNVTWHVYAMTAAGLGIIYLFPYL
FT                   PVIGKLIPSPLVCIVVLTAISMSFNIDIRTVGDMGNLPDTLPIFLWPDVPLNLETLLII
FT                   LPYSIGLAVVGLLESMMTATIVDDLTDTTSDKNRECKGQGLANIFTGFLGGMAGCAMIG
FT                   QSMINIKSGGRGRLSTLSAGVFLLIMVVFLGPWLKQIPMAALVAVMIMVAIGTFSWSSI
FT                   TDLRKHPISTNIVMLATVIIVVMTHNLALGVLVGVLLASLFFANKISRMMVIKNNTDKN
FT                   EPRKYTVIGQVFFASSDKFITSFDFKEVIESVTIDLSAAHFWDVTSVSALDKVVVKFRR
FT                   EGTHVDLIGMNEATLTIVDKFGVHDKPEEVEKLLAGH"
FT   misc_feature    complement(209376..209675)
FT                   /locus_tag="VSAL_II0183"
FT                   /note="HMMPfam hit to PF01740, STAS domain, score 2.6e-07"
FT                   /inference="protein motif:HMMPfam:PF01740"
FT   misc_feature    complement(209691..210542)
FT                   /locus_tag="VSAL_II0183"
FT                   /note="HMMPfam hit to PF00916, Sulfate transporter
FT                   family,score 2.9e-105"
FT                   /inference="protein motif:HMMPfam:PF00916"
FT   misc_feature    complement(order(209700..209768,209826..209885,
FT                   209904..209966,209994..210062,210144..210197,
FT                   210264..210332,210351..210419,210447..210506,
FT                   210525..210593,210651..210719,210738..210806))
FT                   /locus_tag="VSAL_II0183"
FT   misc_feature    complement(209748..210809)
FT                   /locus_tag="VSAL_II0183"
FT                   /note="HMMPfam hit to PF00860, Permease family, score
FT                   0.0063"
FT                   /inference="protein motif:HMMPfam:PF00860"
FT   CDS             complement(211360..212235)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0184"
FT                   /old_locus_tag="TVS4306"
FT                   /product="integral membrane protein"
FT                   /db_xref="GOA:B6EQG6"
FT                   /db_xref="InterPro:IPR000620"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQG6"
FT                   /protein_id="CAQ80938.1"
FT                   /translation="MINILSLFTLAALWGGSFLFVRIAANPLGPAVLIETRVAFAALTL
FT                   LVVSFFLKKSLQFTSNLKHFFILGLFNSALPFLLFAYSAQVLNVSTLAILNSSAPIWGA
FT                   IIGAVWTRTWLTKEVVFGLVLGMIGVSVLVGWEAINVGDEAIIPMITALMGAFSYGIAT
FT                   NYAKNAPSVEPFNNAHGSMWASVILVLPLVPFIQVRETISSDTMLSVFALGAVCTGLAY
FT                   LLYFRLINELGASSALSVTFLIPAFGILWGYLFLGETVGINAIIGTILVVTGTMFVTGF
FT                   YRKLLPRKLM"
FT   misc_feature    complement(order(211390..211458,211471..211539,
FT                   211558..211617,211645..211713,211750..211803,
FT                   211813..211881,211894..211962,211975..212043,
FT                   212080..212136,212164..212232))
FT                   /locus_tag="VSAL_II0184"
FT   misc_feature    complement(211396..211767)
FT                   /locus_tag="VSAL_II0184"
FT                   /note="HMMPfam hit to PF00892, Integral membrane protein
FT                   DUF6, score 1.3e-22"
FT                   /inference="protein motif:HMMPfam:PF00892"
FT   misc_feature    complement(211831..212202)
FT                   /locus_tag="VSAL_II0184"
FT                   /note="HMMPfam hit to PF00892, Integral membrane protein
FT                   DUF6, score 5.5e-13"
FT                   /inference="protein motif:HMMPfam:PF00892"
FT   sig_peptide     complement(212164..212235)
FT                   /locus_tag="VSAL_II0184"
FT   CDS             complement(212316..212690)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0185"
FT                   /old_locus_tag="TVS4305"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQG7"
FT                   /protein_id="CAQ80939.1"
FT                   /translation="MTQEQILAACKAGISAWQQAFNSQDAAGCAAQYAEGTVMEARPFG
FT                   TFTGREEIQAFWQNIMDQGFADVDYTEVKWEPIDEDGYLLTANWTMNKAFGVVHSEHWT
FT                   IQEDGKARLIADDFEVQGER"
FT   CDS             join(212836..213060,213064..213672)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0186"
FT                   /old_locus_tag="TVS4303"
FT                   /product="HTH-type transcriptional regulator, LysR family
FT                   (pseudogene)"
FT                   /note="Similar to Photobacterium sp. ska34 Hypothetical
FT                   transcriptional regulator UniProt:Q2C726 (299 aa) fasta
FT                   scores: E()=6e-39, 43.011% id in 279 aa. CDS contains a
FT                   nonsense mutation (TAG) after codon 76. The sequence has
FT                   been checked and is believed to be correct"
FT                   /db_xref="PSEUDO:CAQ80940.1"
FT                   /inference="similar to sequence:UniProt:Q2C726"
FT   misc_feature    212836..212994
FT                   /locus_tag="VSAL_II0186"
FT                   /note="HMMPfam hit to PF00126, Bacterial regulatory
FT                   helix-turn-helix protei, score 7.8e-14"
FT                   /inference="protein motif:HMMPfam:PF00126"
FT   misc_feature    212854..212919
FT                   /locus_tag="VSAL_II0186"
FT                   /note="Predicted helix-turn-helix motif with score
FT                   2066.000, SD 6.22 at aa 7-28, sequence
FT                   GSITKAADKLELSKSVISQHLK"
FT   misc_feature    212857..212949
FT                   /locus_tag="VSAL_II0186"
FT                   /note="PS00044 Bacterial regulatory proteins, lysR family
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00044"
FT   misc_feature    213064..213669
FT                   /locus_tag="VSAL_II0186"
FT                   /note="HMMPfam hit to PF03466, LysR substrate binding
FT                   domain, score 2.7e-16"
FT                   /inference="protein motif:HMMPfam:PF03466"
FT   CDS             complement(213752..214354)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0187"
FT                   /old_locus_tag="TVS4302"
FT                   /product="hypothetical protein (fragment)"
FT                   /note="Similar to C-terminal part of Vibrio cholerae
FT                   Hypothetical protein (alkaline phosphatase) UniProt:Q9KND2
FT                   (624 aa) fasta scores: E()=2.1e-67, 77.670% id in 206 aa.
FT                   CDS is truncated by the insertion of the upstream IS
FT                   element and subsequent recombination events"
FT                   /db_xref="PSEUDO:CAQ80941.1"
FT                   /inference="similar to sequence:UniProt:Q9KND2"
FT   repeat_region   complement(214357..215795)
FT                   /note="VSa9"
FT   CDS             complement(214523..215716)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0188"
FT                   /old_locus_tag="TVS4301"
FT                   /product="transposase"
FT                   /db_xref="GOA:B6EIP3"
FT                   /db_xref="InterPro:IPR007069"
FT                   /db_xref="UniProtKB/TrEMBL:B6EIP3"
FT                   /protein_id="CAQ80942.1"
FT                   /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA
FT                   AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT
FT                   LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL
FT                   SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDW
FT                   SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD
FT                   HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE
FT                   AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA"
FT   repeat_region   complement(order(215796..217385,218392..218471))
FT                   /note="VSa2"
FT   CDS             complement(215797..216654)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0189"
FT                   /old_locus_tag="TVSb0078"
FT                   /product="transposase (fragment)"
FT                   /note="Similar to Shewanella sp. Transposase IS66
FT                   UniProt:A1RLT8 (500 aa) fasta scores: E()=8e-63, 52.6% id
FT                   in 287 aa. CDS is truncated by the insertion of the
FT                   downstream IS element and subsequent recombination events"
FT                   /inference="similar to sequence:UniProt:A1RLT8"
FT   CDS             complement(216726..217073)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0190"
FT                   /old_locus_tag="TVSb0079"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR008878"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN4"
FT                   /protein_id="CAQ80944.1"
FT                   /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI
FT                   FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL
FT                   GHQPVHYQTTL"
FT   CDS             complement(217070..217384)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0191"
FT                   /old_locus_tag="TVSb0080"
FT                   /product="transposase"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN3"
FT                   /protein_id="CAQ80945.1"
FT                   /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA
FT                   RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS
FT                   "
FT   repeat_region   217388..218392
FT                   /note="VSa6"
FT   repeat_region   217388..217406
FT                   /note="IR of VSa6"
FT   CDS             217484..218365
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0192"
FT                   /old_locus_tag="TVS4297"
FT                   /product="transposase"
FT                   /db_xref="GOA:B6EH02"
FT                   /db_xref="InterPro:IPR002559"
FT                   /db_xref="UniProtKB/TrEMBL:B6EH02"
FT                   /protein_id="CAQ80946.1"
FT                   /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC
FT                   MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK
FT                   GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS
FT                   LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE
FT                   ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI
FT                   KLSECEFELILA"
FT   misc_feature    217811..218305
FT                   /locus_tag="VSAL_II0192"
FT                   /note="HMMPfam hit to PF01609, Transposase DDE domain,score
FT                   9.3e-30"
FT                   /inference="protein motif:HMMPfam:PF01609"
FT   repeat_region   218374..218392
FT                   /note="IR of VSa6"
FT   repeat_region   complement(218449..218472)
FT                   /note="IR of VSa2"
FT   CDS             218474..218941
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0193"
FT                   /old_locus_tag="TVS4296"
FT                   /product="biotin sulfoxide reductase (fragment)"
FT                   /note="Similar to Escherichia coli Trimethylamine-N-oxide
FT                   reductase 2 precursor TorZ UniProt:P46923 (809 aa) fasta
FT                   scores: E()=4e-34, 63.158% id in 152 aa. CDS is truncated
FT                   by the insertion of the upstream IS element and subsequent
FT                   recombination events"
FT                   /db_xref="PSEUDO:CAQ80947.1"
FT                   /inference="similar to sequence:UniProt:P46923"
FT   misc_feature    218516..218872
FT                   /locus_tag="VSAL_II0193"
FT                   /note="HMMPfam hit to PF01568, Molydopterin dinucleotide
FT                   binding dom, score 6.5e-30"
FT                   /inference="protein motif:HMMPfam:PF01568"
FT   CDS             complement(219030..220415)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0194"
FT                   /old_locus_tag="TVS4295"
FT                   /product="two-component system sensor protein, histidine
FT                   kinase"
FT                   /note="Similar to Acinetobacter baumannii BfmS
FT                   UniProt:Q2VSW5 (549 aa) fasta scores: E()=5.5e-21, 33.234%
FT                   id in 334 aa"
FT                   /db_xref="GOA:B6EQH5"
FT                   /db_xref="InterPro:IPR005467"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQH5"
FT                   /inference="similar to sequence:UniProt:Q2VSW5"
FT                   /protein_id="CAQ80948.1"
FT                   /translation="MALRWFQSCPSFIRKHRNGLAFRLFSSFAIILVVILSLQSLAEIA
FT                   LMKSMLRIPSSIQDKMLDLAYQANVLIDEGDMDELADWANAQEYYLFVLDKNNRPITHR
FT                   DMHPHFEFKLKYLRPLNTQLDNKVNQPIIGIPLNDGLTIVMQMPYKYHPARYFSLYFSI
FT                   IKIIISGLILGLFSWVIARYLQKPLDKLREVSHRLSEGDFTIKVADEIGHSVREFSELA
FT                   HDFDNMTGEIHSLAEKQKRLIRDVSHELRTPLARHNLALHLLRKRTDNEHVHLLDRLEN
FT                   ESAEMNNLVGEILEFSQLENARYSTKLEPLILDRYCEAQITQLRSDLTANQTLETRFSL
FT                   GTDVVMVDRRLLARCVNNLISNAIKYAGDNATIRLLISHYQENELHYIAVIVEDDGLGI
FT                   PEHQLKDIFAPFARLESARDKQSGGYGLGLAIVKEAMSVMRGKVVAENRKEGGLRISLL
FT                   FPL"
FT   misc_feature    complement(219033..219377)
FT                   /locus_tag="VSAL_II0194"
FT                   /note="HMMPfam hit to PF02518, Histidine kinase-, DNA
FT                   gyrase B-, and HSP90, score 1e-26"
FT                   /inference="protein motif:HMMPfam:PF02518"
FT   misc_feature    complement(219510..219704)
FT                   /locus_tag="VSAL_II0194"
FT                   /note="HMMPfam hit to PF00512, His Kinase A
FT                   (phosphoacceptor) domain, score 3.1e-12"
FT                   /inference="protein motif:HMMPfam:PF00512"
FT   misc_feature    complement(219714..219932)
FT                   /locus_tag="VSAL_II0194"
FT                   /note="HMMPfam hit to PF00672, HAMP domain, score 3.1e-11"
FT                   /inference="protein motif:HMMPfam:PF00672"
FT   misc_feature    complement(order(219873..219941,220290..220358))
FT                   /locus_tag="VSAL_II0194"
FT   sig_peptide     complement(220290..220415)
FT                   /locus_tag="VSAL_II0194"
FT   CDS             complement(join(220425..220838,220838..221089))
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0195"
FT                   /old_locus_tag="TVS4294"
FT                   /product="putative response regulator (pseudogene)"
FT                   /note="Similar to Vibrio fischeri Probable transcriptional
FT                   regulator SyrB UniProt:Q5E145 (221 aa) fasta scores:
FT                   E()=2e-72, 94.118% id in 221 aa. CDS contains a frameshift
FT                   after codon 85. The sequence has been checked and is
FT                   believed to be correct"
FT                   /db_xref="PSEUDO:CAQ80949.1"
FT                   /inference="similar to sequence:UniProt:Q5E145"
FT   misc_feature    complement(220446..220676)
FT                   /locus_tag="VSAL_II0195"
FT                   /note="HMMPfam hit to PF00486, Transcriptional regulatory
FT                   protein, C te, score 2e-13"
FT                   /inference="protein motif:HMMPfam:PF00486"
FT   misc_feature    complement(220778..221086)
FT                   /locus_tag="VSAL_II0195"
FT                   /note="HMMPfam hit to PF00072, Response regulator receiver
FT                   domain, score 2.4e-22"
FT                   /inference="protein motif:HMMPfam:PF00072"
FT   CDS             221325..221684
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0196"
FT                   /old_locus_tag="TVS4293"
FT                   /product="putative exported protein"
FT                   /db_xref="InterPro:IPR016879"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQH7"
FT                   /protein_id="CAQ80950.1"
FT                   /translation="MKSLKTLALSAVIILASSNAMANPAVISGHYLNKASHTILHTDHV
FT                   TTKQAAYNQALTQLNKLDNSSPSELQKILKVDSQNVQLDNQSYITVKETMNMQGQIQYT
FT                   GLIHANYHYLEPISN"
FT   sig_peptide     221325..221390
FT                   /locus_tag="VSAL_II0196"
FT   CDS             221796..222479
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0197"
FT                   /old_locus_tag="TVS4292"
FT                   /product="transcriptional activator protein, response
FT                   regulator"
FT                   /db_xref="GOA:B6EQH8"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQH8"
FT                   /protein_id="CAQ80951.1"
FT                   /translation="MKLLIIEDETKAGDYLKKGLTESGYTVDLSRDGVDGLYNATTYQY
FT                   DLIILDVMLPKLNGWQILQTLRNCENSTPIIMLTAKDQVDDRVKGFELGANDYLIKPFA
FT                   FAELKARIENALRSQTANSHTQKVNELVLCDLQLDLLKHTATRNHDNITLTAKEFSLLE
FT                   LFMRKQGEVLSRTTIASLIWDMNFDSDTNVIDVAVKRLRAKIDKPYDTPLIHTVRGMGY
FT                   KMDEV"
FT   misc_feature    221796..222134
FT                   /locus_tag="VSAL_II0197"
FT                   /note="HMMPfam hit to PF00072, Response regulator receiver
FT                   domain, score 4.7e-35"
FT                   /inference="protein motif:HMMPfam:PF00072"
FT   misc_feature    222240..222467
FT                   /locus_tag="VSAL_II0197"
FT                   /note="HMMPfam hit to PF00486, Transcriptional regulatory
FT                   protein, C te, score 1.8e-21"
FT                   /inference="protein motif:HMMPfam:PF00486"
FT   CDS             222484..223824
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0198"
FT                   /old_locus_tag="TVS4291"
FT                   /product="two-component system sensor protein, histidine
FT                   kinase"
FT                   /note="Similar to Escherichia coli Sensor kinase CusS
FT                   UniProt:P77485 (480 aa) fasta scores: E()=1.2e-33, 29.787%
FT                   id in 470 aa"
FT                   /db_xref="GOA:B6EQH9"
FT                   /db_xref="InterPro:IPR006290"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQH9"
FT                   /inference="similar to sequence:UniProt:P77485"
FT                   /protein_id="CAQ80952.1"
FT                   /translation="MKTHYLSMKLKLTLMFFSTSVFVFIGLGIAIQYLVQSHFYEEDRN
FT                   QLTSNRTSISVLLQNKGITSTEIFASLKSRGINVWITKNNGEQTQNTNVIANDDAFSPS
FT                   KDLNEWTYNNHTFRTLYYPLNAHDEYTGLLIGINIDHHIQFNKKLKVILMWSISIASLL
FT                   SFLYSFLIVSMGFKPLRSLQNRIKEVQPNKLHIRLSDESLPTELIEFARVQNQMLERLE
FT                   LGFQRLSDFSSDIAHELKTPLSNIVTQTQVTLSHPRSTQDYQDILSSNLEELERINKTI
FT                   NDTLYLAKSENDLLLKSNIHLDLVSLFEPIVEYYSIISEESDVTIRLSGKGVLWGDKSM
FT                   IQRIANNLLSNAIRHSAPNSSILIDIKDSPNKVKLSISNTGDTIQEKDLPFIFERFYRA
FT                   DKSRRHSSSTGAGLGLTIVRSIVNAHSGKITVQSADTQTTFTVSFQK"
FT   sig_peptide     222484..222573
FT                   /locus_tag="VSAL_II0198"
FT   misc_feature    order(222520..222588,222934..223002)
FT                   /locus_tag="VSAL_II0198"
FT   misc_feature    222940..223152
FT                   /locus_tag="VSAL_II0198"
FT                   /note="HMMPfam hit to PF00672, HAMP domain, score 0.011"
FT                   /inference="protein motif:HMMPfam:PF00672"
FT   misc_feature    223162..223362
FT                   /locus_tag="VSAL_II0198"
FT                   /note="HMMPfam hit to PF00512, His Kinase A
FT                   (phosphoacceptor) domain, score 1.9e-15"
FT                   /inference="protein motif:HMMPfam:PF00512"
FT   misc_feature    223489..223818
FT                   /locus_tag="VSAL_II0198"
FT                   /note="HMMPfam hit to PF02518, Histidine kinase-, DNA
FT                   gyrase B-, and HSP90, score 6.3e-28"
FT                   /inference="protein motif:HMMPfam:PF02518"
FT   CDS             complement(join(223828..224712,224715..224876))
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0199"
FT                   /old_locus_tag="TVS4290"
FT                   /product="putative potassium channel (pseudogene)"
FT                   /note="Similar to Photobacterium profundum 3tck Putative
FT                   potassium channel related protein UniProt:Q1ZAR2 (341 aa)
FT                   fasta scores: E()=8e-53, 45.593% id in 329 aa. CDS contains
FT                   a frameshift after codon 54. The sequence has been checked
FT                   and is believed to be correct"
FT                   /db_xref="PSEUDO:CAQ80953.1"
FT                   /inference="similar to sequence:UniProt:Q1ZAR2"
FT   misc_feature    complement(order(224554..224712,224715..224795))
FT                   /locus_tag="VSAL_II0199"
FT                   /note="HMMPfam hit to PF07885, Ion channel, score 3.9e-15"
FT                   /inference="protein motif:HMMPfam:PF07885"
FT   misc_feature    complement(224751..224819)
FT                   /locus_tag="VSAL_II0199"
FT   CDS             complement(224956..225429)
FT                   /transl_table=11
FT                   /gene="ogt"
FT                   /locus_tag="VSAL_II0200"
FT                   /old_locus_tag="TVS4289"
FT                   /product="methylguanine-DNA--protein-cysteine
FT                   methyltransferase"
FT                   /EC_number="2.1.1.63"
FT                   /db_xref="GOA:B6EQI1"
FT                   /db_xref="InterPro:IPR014048"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQI1"
FT                   /protein_id="CAQ80954.1"
FT                   /translation="MNVYTQFDSPIGLITVNGNDDGLLGVWYESHARTLSDFGVQDDEH
FT                   PILQLTISQLTEYFNGERREFSIPLAANGTEFQNKVWQALTTIPYGETWCYKDLAIAVG
FT                   NPKASQAVGGANGKNPISIIVPCHRVIGKNGSLTGYAGGLDIKDALLKLEGVR"
FT   misc_feature    complement(224959..225210)
FT                   /gene="ogt"
FT                   /locus_tag="VSAL_II0200"
FT                   /note="HMMPfam hit to PF01035, 6-O-methylguanine DNA
FT                   methyltransfera, score 5.6e-43"
FT                   /inference="protein motif:HMMPfam:PF01035"
FT   misc_feature    complement(225037..225057)
FT                   /gene="ogt"
FT                   /locus_tag="VSAL_II0200"
FT                   /note="PS00374 Methylated-DNA--protein-cysteine
FT                   methyltransferase active site."
FT                   /inference="protein motif:ProSite:PS00374"
FT   misc_feature    complement(225214..225429)
FT                   /gene="ogt"
FT                   /locus_tag="VSAL_II0200"
FT                   /note="HMMPfam hit to PF02870, 6-O-methylguanine DNA
FT                   methyltransfera, score 2.9e-06"
FT                   /inference="protein motif:HMMPfam:PF02870"
FT   CDS             complement(225434..225739)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0201"
FT                   /old_locus_tag="TVS4288"
FT                   /product="hypothetical protein"
FT                   /db_xref="GOA:B6EQI2"
FT                   /db_xref="InterPro:IPR011991"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQI2"
FT                   /protein_id="CAQ80955.1"
FT                   /translation="MDIEIVAKALKELGHPTRLAIYKSVVRAGYKGIAVGGLQEKLDIP
FT                   GSTLSHHVSGLASAGLISQRREGRTLFCVAEYEKLTSVIGFLQDECCFDEACEEEE"
FT   repeat_region   complement(225762..227200)
FT                   /note="VSa9"
FT   CDS             complement(225928..227121)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0202"
FT                   /old_locus_tag="TVS4287"
FT                   /product="transposase"
FT                   /db_xref="GOA:B6EIP3"
FT                   /db_xref="InterPro:IPR007069"
FT                   /db_xref="UniProtKB/TrEMBL:B6EIP3"
FT                   /protein_id="CAQ80956.1"
FT                   /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA
FT                   AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT
FT                   LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL
FT                   SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYYELDLSSEECPYIRNKTDW
FT                   SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD
FT                   HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE
FT                   AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA"
FT   CDS             227749..227946
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0203"
FT                   /old_locus_tag="TVS4286"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQI4"
FT                   /protein_id="CAQ80957.1"
FT                   /translation="MIVNSPESTDRAMELIFELLEDYEANIKAIHELADKIEVYEATAP
FT                   ELADFNNRMAKLDELEKLAK"
FT   CDS             228254..228511
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0204"
FT                   /old_locus_tag="TVS4285"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQI5"
FT                   /protein_id="CAQ80958.1"
FT                   /translation="MENELKLLKIVLKADLTKVELKIVVYLLNTGDKTVKLTNPEMACA
FT                   CGILPANFRRALKKLEENQVVGRRKDGIYIRSINSWKASK"
FT   CDS             228601..229203
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0205"
FT                   /old_locus_tag="TVS4284"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQI6"
FT                   /protein_id="CAQ80959.1"
FT                   /translation="MIDFKHDTVKLHIAFEIKNDCYVKVTKLNEEKNKMLQDFIDEIEM
FT                   RKDTDWDLGLEFQNRIMPKMASFGGQISGLTRIVKSELAKYVLGVLVDNNKNYFQQFTT
FT                   MNFLVFSKYFLETSPTNKSILQFIDNSIDWKTKNINNPKFARKEKFIEYLDKLDVDKSG
FT                   HFWGDWFNEEYSKYRELVQRDSANARENVRLIKESIK"
FT   CDS             229267..229827
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0206"
FT                   /old_locus_tag="TVS4283"
FT                   /product="putative O-acetyltransferase"
FT                   /db_xref="GOA:B6EQI7"
FT                   /db_xref="InterPro:IPR001451"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQI7"
FT                   /protein_id="CAQ80960.1"
FT                   /translation="MAFLTDDELKCMGFKSLGKSVKISDKASIYNCNEIELGDHSRIDD
FT                   FCVVSGKVKIGRNVHFATHCLVAGGEEGLIFDDFSGLAYSCQIFTRTDDYSGSSMTNPT
FT                   VPDKYKFVVKKEMRVGRHAIVGAGSIILPGVNLAEGTSIGALSLVRKSTQPWSIYLGNP
FT                   AKKLKDRKKDLLKLEELYLIEAL"
FT   misc_feature    229303..229326
FT                   /locus_tag="VSAL_II0206"
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    229366..229419
FT                   /locus_tag="VSAL_II0206"
FT                   /note="HMMPfam hit to PF00132, Bacterial transferase
FT                   hexapeptide (three rep, score 17"
FT                   /inference="protein motif:HMMPfam:PF00132"
FT   misc_feature    229420..229473
FT                   /locus_tag="VSAL_II0206"
FT                   /note="HMMPfam hit to PF00132, Bacterial transferase
FT                   hexapeptide (three rep, score 16"
FT                   /inference="protein motif:HMMPfam:PF00132"
FT   misc_feature    229630..229683
FT                   /locus_tag="VSAL_II0206"
FT                   /note="HMMPfam hit to PF00132, Bacterial transferase
FT                   hexapeptide (three rep, score 0.35"
FT                   /inference="protein motif:HMMPfam:PF00132"
FT   CDS             230142..230846
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0207"
FT                   /old_locus_tag="TVS4282"
FT                   /product="hypothetical protein (fragment)"
FT                   /note="CDS is truncated by the insertion of the downstream
FT                   IS element. There is an inframe translational stop 8 codon
FT                   amino acid residues further downstream within the IS
FT                   element. The extended CDS may therefore be expressed and
FT                   functional"
FT   repeat_region   complement(230848..232286)
FT                   /note="VSa9"
FT   CDS             complement(231014..232093)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0208"
FT                   /old_locus_tag="TVS4281"
FT                   /product="transposase"
FT                   /db_xref="GOA:B6EMI2"
FT                   /db_xref="InterPro:IPR007069"
FT                   /db_xref="UniProtKB/TrEMBL:B6EMI2"
FT                   /protein_id="CAQ80962.1"
FT                   /translation="MLSCGTAAFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATE
FT                   RWIQKQQHVFPECEYQHITFTLPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDV
FT                   GIFCALHTYGRKLNWNTHLHLSVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGK
FT                   AYYELDLSSEECPYIRNKTDWSRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPP
FT                   ISASRLSHYAKGGMITFNYLDHRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFL
FT                   SMRRRGEALPRVYAALGMTIEAEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVG
FT                   NSVNDLVTHAIVQSELRAA"
FT   CDS             232293..233210
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0209"
FT                   /old_locus_tag="TVS4280"
FT                   /product="hypothetical protein (fragment)"
FT                   /note="Similar to Erwinia carotovora subsp. atroseptica
FT                   Hypothetical protein UniProt:Q6CZ25 (424 aa) fasta scores:
FT                   E()=6.4e-61, 52.258% id in 310 aa. CDS is truncated by the
FT                   insertion of the upstream IS element and subsequent
FT                   recombination events"
FT                   /inference="similar to sequence:UniProt:Q6CZ25"
FT   misc_feature    232431..233090
FT                   /locus_tag="VSAL_II0209"
FT                   /note="HMMPfam hit to PF07005, Protein of unknown function,
FT                   DUF1537, score 3e-92"
FT                   /inference="protein motif:HMMPfam:PF07005"
FT   CDS             233207..233839
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0210"
FT                   /old_locus_tag="TVS4279"
FT                   /product="putative class II aldolase"
FT                   /db_xref="GOA:B6EQI9"
FT                   /db_xref="InterPro:IPR001303"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQI9"
FT                   /protein_id="CAQ80964.1"
FT                   /translation="MTEQQLRDQMVELARSMFERGYATGGAGNLSLKLPNGHFLATPTG
FT                   SSFGRLVAEDLSVVDVDGNHISGKKPSKEVAFHLAIYRNSLQCNAIVHLHSTYLTALSC
FT                   LEGLDPENAIQPFTPYYVMRIGQLPVIPYLRPGEPKIAEELAKRASDYRSFLLANHGPV
FT                   VTGTDFVDAVDNAEELEETAKLAFLLKDKVIRYLTDKEVDDLKGRGK"
FT   misc_feature    233228..233809
FT                   /locus_tag="VSAL_II0210"
FT                   /note="HMMPfam hit to PF00596, Class II Aldolase and
FT                   Adducin N-terminal, score 2.2e-67"
FT                   /inference="protein motif:HMMPfam:PF00596"
FT   CDS             233839..234615
FT                   /transl_table=11
FT                   /gene="hyi"
FT                   /locus_tag="VSAL_II0211"
FT                   /old_locus_tag="TVS4278"
FT                   /product="hydroxypyruvate isomerase"
FT                   /EC_number="5.3.1.22"
FT                   /db_xref="GOA:B6EQJ0"
FT                   /db_xref="InterPro:IPR013022"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQJ0"
FT                   /protein_id="CAQ80965.1"
FT                   /translation="MAKFAANLTMLFTEVDFLERFEKAHSAGFKAVEYLFPYAFEAEAL
FT                   AEKMQMFGFEQALFNMPPGDWDAGERGFAAIPGREDEFKQSVDAALLYAEVLNCRKVHA
FT                   MSGLIDTNYTREQQTVTFISNIRYAADKFAEHGIQLMIEPLNSRDVPHYFVAHQREAVD
FT                   LIKQIDRPNVKLQLDLYHAQIMDGDLSTLIKEVAPFIGHVQIASVPERHEPSEGELNYP
FT                   HLFTVLDECGYQDWIGCEYNPRNTTEEGLGWVKPYL"
FT   misc_feature    233899..234495
FT                   /gene="hyi"
FT                   /locus_tag="VSAL_II0211"
FT                   /note="HMMPfam hit to PF01261, Xylose isomerase-like TIM
FT                   barrel, score 4e-47"
FT                   /inference="protein motif:HMMPfam:PF01261"
FT   CDS             234721..236184
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0212"
FT                   /old_locus_tag="TVS4277"
FT                   /product="gluconate permease"
FT                   /note="Similar to Pseudomonas aeruginosa Gluconate permease
FT                   GnuT UniProt:Q9ZIJ1 (450 aa) fasta scores: E()=1e-34,
FT                   29.306% id in 447 aa"
FT                   /db_xref="GOA:B6EQJ1"
FT                   /db_xref="InterPro:IPR003474"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQJ1"
FT                   /inference="similar to sequence:UniProt:Q9ZIJ1"
FT                   /protein_id="CAQ80966.1"
FT                   /translation="MDGALIGIVIGILAMMGMMGMIIKTRIPVALAMIIASIIMGLFAG
FT                   MAPTELINSIQAGFGGVLGGIGLIIAFGVIMGACFERSGAAVRMAKTFVKLCGKGREDL
FT                   ALGFTGVLVAIPVFCDSAYIILHSLVRAISRDTGKSAVGLGVTLALGLLITHALVPPTP
FT                   GPVAVAGILGVDLGVYMMWGLIVSIPMMLLSMIYIRRVGKEYYRVPNGDMWITNQADWA
FT                   NLEKVKETDDKELPSNFLSFGPILIPIALILVNTIIGKGDSMPYQVLELLGNPVVAVGL
FT                   GVLMALYGLTRHIERKDMVGSMDDALSTTGLILIVTGCGGAMGAVLKASGAGPQVAEAI
FT                   ASSGIPPLLVPLAIASMLRIIQGSATASMMVAATMTLPLVETLGLDPVFVALACAVGPV
FT                   GFSHLNDSYFHIINRTLGITELADQIKIWSVSSTIAWAIGASIIMILNLVFGKGGTMID
FT                   PLVPFGVLAVIMFWLKAKEKNQVKMATIN"
FT   misc_feature    order(234733..234789,234799..234858,234892..234960,
FT                   235030..235098,235135..235203,235246..235314,
FT                   235426..235494,235522..235590,235651..235719,
FT                   235735..235803,236002..236070,236080..236139)
FT                   /locus_tag="VSAL_II0212"
FT   misc_feature    234736..236067
FT                   /locus_tag="VSAL_II0212"
FT                   /note="HMMPfam hit to PF02447, GntP family permease, score
FT                   2.1e-93"
FT                   /inference="protein motif:HMMPfam:PF02447"
FT   misc_feature    234748..235914
FT                   /locus_tag="VSAL_II0212"
FT                   /note="HMMPfam hit to PF03600, Citrate transporter, score
FT                   0.00027"
FT                   /inference="protein motif:HMMPfam:PF03600"
FT   misc_feature    234763..236148
FT                   /locus_tag="VSAL_II0212"
FT                   /note="HMMPfam hit to PF06808, DctM-like transporters,score
FT                   0.0014"
FT                   /inference="protein motif:HMMPfam:PF06808"
FT   CDS             complement(236279..236842)
FT                   /transl_table=11
FT                   /gene="gfa"
FT                   /locus_tag="VSAL_II0213"
FT                   /old_locus_tag="TVS4276"
FT                   /product="glutathione-dependent formaldehyde-activating
FT                   enzyme"
FT                   /EC_number="4.4.1.22"
FT                   /db_xref="GOA:B6EQJ2"
FT                   /db_xref="InterPro:IPR014185"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQJ2"
FT                   /protein_id="CAQ80967.1"
FT                   /translation="MTITTLHPAIDNGFSATDENFQGGTLHCQCKENKVAVKLTAQTAH
FT                   NHACGCSKCWKPEGAIFSQVAVISRDNVEVIANAEKLVVIDEAATIKRHACKECGTHMY
FT                   GRIDNQDHPFFGLDFVHTELSEDAGFSAPQFAAFVSSIIETGTDPKDMDAIRARFEELG
FT                   LPTYDCLSPALMDAIATHIAAQNK"
FT   misc_feature    complement(236456..236704)
FT                   /gene="gfa"
FT                   /locus_tag="VSAL_II0213"
FT                   /note="HMMPfam hit to PF04828, Protein of unknown function
FT                   (DUF636), score 7.4e-16"
FT                   /inference="protein motif:HMMPfam:PF04828"
FT   CDS             237488..238360
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0214"
FT                   /old_locus_tag="TVS4275"
FT                   /product="patatin-like phospholipase"
FT                   /db_xref="GOA:B6EQJ3"
FT                   /db_xref="InterPro:IPR002641"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQJ3"
FT                   /protein_id="CAQ80968.1"
FT                   /translation="MAKSALVVEGGAMRGIFASGVLDIFMKNEFMPYDFAIGVSAGASN
FT                   LLGYLAHYPQRSFHVITKLATHKRFFNLPRFARGGDLVDVRWLIDESNTRHPLDFERLF
FT                   SSIPLYAAVTNIDSGNADYYQVKKENVDDVLEATTALPIAYKSTPCFSGGCYTDGGVAD
FT                   SIPVKEAYRRGARDITVILSHPLSYEMKPTRSPWLMTKLLARYPQIAQAMLVRAENYNQ
FT                   SLEFIRNPPEGTTIRVIAPPEDFAVKRLSMKYPTLVAGYEMGVSAGLHHLSSRDGTFGL
FT                   DSENCHFCI"
FT   misc_feature    237503..238000
FT                   /locus_tag="VSAL_II0214"
FT                   /note="HMMPfam hit to PF01734, Patatin-like
FT                   phospholipase,score 1.1e-08"
FT                   /inference="protein motif:HMMPfam:PF01734"
FT   CDS             238419..239870
FT                   /transl_table=11
FT                   /gene="catA"
FT                   /locus_tag="VSAL_II0215"
FT                   /old_locus_tag="TVS4274"
FT                   /product="catalase"
FT                   /EC_number="1.11.1.6"
FT                   /db_xref="GOA:Q3LSM1"
FT                   /db_xref="InterPro:IPR018028"
FT                   /db_xref="PDB:2ISA"
FT                   /db_xref="UniProtKB/TrEMBL:Q3LSM1"
FT                   /protein_id="CAQ80969.1"
FT                   /translation="MSKKLTTAAGCPVAHNQNVQTAGKRGPQLLQDVWFLEKLAHFDRE
FT                   VIPERRMHAKGSGAYGTFTVTHDITKYTKAKIFSDIGKKTDMFARFSTVAGERGAADAE
FT                   RDIRGFSLKFYTEEGNWDLAGNNTPVFFLRDPLKFPDLNHAVKRDPRTNMRSAKNNWDF
FT                   WTSLPEALHQVTIVMSDRGIPATYRHMHGFGSHTFSFINSDNERYWVKFHFVSQQGIKN
FT                   LSDAEAGELVGNDRESHQRDLLDSIDNQDFPKWTLKVQIMPEADAATVPYNPFDLTKVW
FT                   PHKDYPLIEVGEFELNRNPQNYFAEVEQAAFNPANVVPGISFSPDKMLQGRLFAYGDAQ
FT                   RYRLGVNHQHIPVNAPRCPVHSYHRDGAMRVDGNFGSTLGYEPNDQGQWAEQPDFSEPP
FT                   LNLDGAAAHWDHREDEDYFSQPGDLFGLMTAEKQAILFDNTARNLNGVPKEIQLRHVTH
FT                   CYKADPAYGEGIGKLLGFDISEYNS"
FT   sig_peptide     238419..238466
FT                   /gene="catA"
FT                   /locus_tag="VSAL_II0215"
FT   misc_feature    238434..239588
FT                   /gene="catA"
FT                   /locus_tag="VSAL_II0215"
FT                   /note="HMMPfam hit to PF00199, Catalase, score 9e-286"
FT                   /inference="protein motif:HMMPfam:PF00199"
FT   misc_feature    238542..238592
FT                   /gene="catA"
FT                   /locus_tag="VSAL_II0215"
FT                   /note="PS00438 Catalase proximal active site signature."
FT                   /inference="protein motif:ProSite:PS00438"
FT   misc_feature    239412..239438
FT                   /gene="catA"
FT                   /locus_tag="VSAL_II0215"
FT                   /note="PS00437 Catalase proximal heme-ligand signature."
FT                   /inference="protein motif:ProSite:PS00437"
FT   CDS             240090..241070
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0216"
FT                   /old_locus_tag="TVS4273"
FT                   /product="conserved hypothetical protein"
FT                   /db_xref="InterPro:IPR001763"
FT                   /db_xref="UniProtKB/Swiss-Prot:B6EQJ5"
FT                   /protein_id="CAQ80970.1"
FT                   /translation="MSQYIVCALYKFVSLEDYTEIRQPLTQVMEDNQIRGTLLLASEGI
FT                   NGTVAGSRKAIDTLLTWFKEDSRLADVVYKESINDVQPFNRTKVKLKKEIVTMGVEGID
FT                   PLHVVGTYVKPADWNALISDPDVLLVDTRNDYEVDIGTFKYAVNPKTETFRDFPQYVAE
FT                   NLDPAKHKKVAMFCTGGIRCEKSTAYMKEQGFDEVYHLEGGILKYLEEVPEENSLWEGD
FT                   CYVFDGRVAVNHQLEKSHYDVCNACRLPITDEDKQSDSFEKGVSCPKCIDQHTEEQKSR
FT                   FREREKQVQLANERGETHVGGDAAKLIEQRKQEKKEKKQQQRSSK"
FT   misc_feature    240429..240722
FT                   /locus_tag="VSAL_II0216"
FT                   /note="HMMPfam hit to PF00581, Rhodanese-like domain,score
FT                   2.7e-14"
FT                   /inference="protein motif:HMMPfam:PF00581"
FT   CDS             241306..242493
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0217"
FT                   /old_locus_tag="TVS4272"
FT                   /product="chitinase B"
FT                   /db_xref="GOA:B6EQJ6"
FT                   /db_xref="InterPro:IPR004302"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQJ6"
FT                   /protein_id="CAQ80971.1"
FT                   /translation="MTNTIKINSLTIAFVGALSSMGVQAHGWVEYPSARQNTCYLDGGF
FT                   WDNTIPNQACQSAFDESGAFPFVQRNEVAANVPNYKDMAHVQAIVRDGNLCSAGDKAKS
FT                   GLNMGSTHWQKTAITLDENNQLELVFNATAPHNPSYWQFYLSNVNYDPTVPLTWGDLDV
FT                   VDTAGDIIVGDDKKYRIKITLPADRADSAVLYTRWQREDAAGEGFYNCSDIAFDGAGTT
FT                   PPGPIDPVEPPPQYSDLGYYIGQGFGPVESGDSVRFRTFDATGAETTDISLAITVNNTA
FT                   TWSAELAGQFNQLKNKAWFIGIWHQEMNHYMYDTINIYANRVFAPKANLSYQLSLIKAD
FT                   ITPPVEPPVEPTNQWDKNNAYQARESVTHQGGTWVAQWWTKGEEPGKTGEWGVWR"
FT   sig_peptide     241306..241386
FT                   /locus_tag="VSAL_II0217"
FT   misc_feature    241336..241953
FT                   /locus_tag="VSAL_II0217"
FT                   /note="HMMPfam hit to PF03067, Chitin binding domain,score
FT                   2.4e-65"
FT                   /inference="protein motif:HMMPfam:PF03067"
FT   misc_feature    242359..242487
FT                   /locus_tag="VSAL_II0217"
FT                   /note="HMMPfam hit to PF02839, Carbohydrate binding domain,
FT                   score 4e-09"
FT                   /inference="protein motif:HMMPfam:PF02839"
FT   CDS             242732..244309
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0218"
FT                   /old_locus_tag="TVS4271"
FT                   /product="ABC transporter, ATP-binding protein"
FT                   /db_xref="GOA:B6EQJ7"
FT                   /db_xref="InterPro:IPR017871"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQJ7"
FT                   /protein_id="CAQ80972.1"
FT                   /translation="MQFGAEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGELTP
FT                   SSGNVSMTPGQKLGVLSQDQFAFEKYSVIDVVIMGDKKLWEIKQERERIYSLPEMSEED
FT                   GMKVAELESEFAEMDGYSAESRAGDILLQAGIDEELHYGLMQQVAPGWKLRVLLAQALF
FT                   ANPDILLLDEPTNNLDINTINWLAGELNQRKCTMIIISHDRHFLNSVCTHMADIDYGEL
FT                   RVYPGNYEYFLEASSLIREQLLSGNAKKAAEISELQDFVNRFGANASKAKQASSRAKKM
FT                   DKISLDEVKSSSRMSPSINFGEGKKLHRQALELKDLGHGFEEDVLFEGGNLLLEAGTRL
FT                   AIIGENGVGKTTLLRCLVNDLEQNEGIVKWSENATFGYCPQDSTADFDNDLSIFDWISQ
FT                   WRTVKHDDLMVRGILGRLLFTADDTNKQAKNCSGGEKNRLLFGKLMMLEINVLVMDEPT
FT                   NHMDMEAIEALNEALKVYTGTLIFVSHDREFVSSLATQIIDVTGKKLVNFQGTYNEYLD
FT                   HKNRMHVA"
FT   misc_feature    242786..243391
FT                   /locus_tag="VSAL_II0218"
FT                   /note="HMMPfam hit to PF00005, ABC transporter, score
FT                   2.7e-42"
FT                   /inference="protein motif:HMMPfam:PF00005"
FT   misc_feature    242807..242830
FT                   /locus_tag="VSAL_II0218"
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    243740..244240
FT                   /locus_tag="VSAL_II0218"
FT                   /note="HMMPfam hit to PF00005, ABC transporter, score
FT                   1.1e-37"
FT                   /inference="protein motif:HMMPfam:PF00005"
FT   misc_feature    243761..243784
FT                   /locus_tag="VSAL_II0218"
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    244022..244066
FT                   /locus_tag="VSAL_II0218"
FT                   /note="PS00211 ABC transporters family signature."
FT                   /inference="protein motif:ProSite:PS00211"
FT   repeat_region   complement(244416..246685)
FT                   /note="VSa2"
FT   repeat_region   complement(244416..244439)
FT                   /note="IR of VSa2"
FT   CDS             complement(244432..245919)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0219"
FT                   /old_locus_tag="TVSa0086"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR004291"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGR2"
FT                   /protein_id="CAQ80973.1"
FT                   /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS
FT                   ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC
FT                   CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK
FT                   GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL
FT                   HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY
FT                   HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKGKTGSADWVLS
FT                   KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT
FT                   LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA
FT                   KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV"
FT   CDS             complement(245991..246338)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0220"
FT                   /old_locus_tag="TVSa0087"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR008878"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN4"
FT                   /protein_id="CAQ80974.1"
FT                   /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI
FT                   FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL
FT                   GHQPVHYQTTL"
FT   misc_feature    complement(245996..246323)
FT                   /locus_tag="VSAL_II0220"
FT                   /note="HMMPfam hit to PF05717, IS66 Orf2 like protein,score
FT                   5.1e-32"
FT                   /inference="protein motif:HMMPfam:PF05717"
FT   CDS             complement(246335..246604)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0221"
FT                   /old_locus_tag="TVS4267"
FT                   /product="transposase"
FT                   /db_xref="UniProtKB/TrEMBL:B6EHB3"
FT                   /protein_id="CAQ80975.1"
FT                   /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA
FT                   RWKQKINATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS"
FT   repeat_region   complement(246662..246685)
FT                   /note="IR of VSa2"
FT   CDS             246909..247592
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0222"
FT                   /old_locus_tag="TVS4266"
FT                   /product="exonuclease"
FT                   /db_xref="GOA:B6EQK1"
FT                   /db_xref="InterPro:IPR013520"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQK1"
FT                   /protein_id="CAQ80976.1"
FT                   /translation="MVSLPTNYMTWKYFVPLSSSKNPAALANTVVVLDFETTGLSPNQG
FT                   DRAIEIGAVKLENGVIVDRFQKLMNPGFRVSSFIANYTGITNAMLMGADDCATVMHEFA
FT                   DFIQGCNLVAHNASFDQRFLDAELDAIQRDYDGTFACSLLVSRRLTQEAPSHKLGELVA
FT                   YHQIDNDGVFHRALADAEVTASLWQVLLDTLESDYAIKSPDFSLMQKIAKTPKGSIVQF
FT                   LKKQG"
FT   misc_feature    246996..247469
FT                   /locus_tag="VSAL_II0222"
FT                   /note="HMMPfam hit to PF00929, Exonuclease, score 4e-31"
FT                   /inference="protein motif:HMMPfam:PF00929"
FT   CDS             complement(247649..247861)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0223"
FT                   /old_locus_tag="TVS4265"
FT                   /product="hypothetical protein"
FT                   /note="Expression may be regulated by Fur"
FT                   /db_xref="InterPro:IPR012663"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQK2"
FT                   /protein_id="CAQ80977.1"
FT                   /translation="MNQINPKKLLNSKWTAVNPIKKEKHFLITEIEFEDNEVTHCLIEA
FT                   VITKRAESLDWKELKDQENWLSGWK"
FT   CDS             248032..248610
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0224"
FT                   /old_locus_tag="TVS4264"
FT                   /product="transcriptional regulator, TetR-family"
FT                   /db_xref="GOA:B6EQK3"
FT                   /db_xref="InterPro:IPR012287"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQK3"
FT                   /protein_id="CAQ80978.1"
FT                   /translation="MAKSAKFNRDDVIEKATNLYWEKGFHATSMRNLQDVIDMRPGSIY
FT                   ATFGSKEGLFKEVLNKYTEMGVAHIAECKANTTSPLSALKEFVTLNIIGNKGPLPSRMC
FT                   MLAKTIAELTEENAELLAEAKKMLVIMEGQFITLLEEAQQQGELSKDKDVAQLARFVQV
FT                   QIMGLRAYACASNGDAPLEKMIDDMFVSL"
FT   misc_feature    248065..248205
FT                   /locus_tag="VSAL_II0224"
FT                   /note="HMMPfam hit to PF00440, Bacterial regulatory
FT                   proteins, tetR family, score 5.8e-09"
FT                   /inference="protein motif:HMMPfam:PF00440"
FT   CDS             248666..249112
FT                   /transl_table=11
FT                   /gene="soxR"
FT                   /locus_tag="VSAL_II0225"
FT                   /old_locus_tag="TVS4263"
FT                   /product="redox-sensitive transcriptional activator SoxR"
FT                   /db_xref="GOA:B6EQK4"
FT                   /db_xref="InterPro:IPR015358"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQK4"
FT                   /protein_id="CAQ80979.1"
FT                   /translation="MLNEKTLLTIGMLSERSGVADSALRFYETKNLIASIRTAGNQRRF
FT                   HPSMLRRIALIQVAQLVGFTLEEITKELADLPMKETATRRDWEKVAKKWQKDLDKKIEQ
FT                   IQSLKENLTGCIGCGCLSMDRCQLLNPDDILHEEGNGAQRLLLK"
FT   misc_feature    248687..248752
FT                   /gene="soxR"
FT                   /locus_tag="VSAL_II0225"
FT                   /note="Predicted helix-turn-helix motif with score 991.000,
FT                   SD 2.56 at aa 8-29, sequence LTIGMLSERSGVADSALRFYET"
FT   misc_feature    248690..248800
FT                   /gene="soxR"
FT                   /locus_tag="VSAL_II0225"
FT                   /note="HMMPfam hit to PF00376, MerR family regulatory
FT                   protein, score 3.6e-10"
FT                   /inference="protein motif:HMMPfam:PF00376"
FT   misc_feature    248696..248764
FT                   /gene="soxR"
FT                   /locus_tag="VSAL_II0225"
FT                   /note="PS00552 Bacterial regulatory proteins, merR family
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00552"
FT   CDS             249754..250005
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0226"
FT                   /old_locus_tag="TVS4262"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQK5"
FT                   /protein_id="CAQ80980.1"
FT                   /translation="MTNEVDMITNLEDLETFLISVESGGLGLTNVAGIAMATNNKDGRR
FT                   FVAVLDDKHQLLFSRWVTEDVFQTGQDLVRNGTNRTTH"
FT   repeat_region   250118..252432
FT                   /note="VSa2"
FT   repeat_region   250118..250141
FT                   /note="IR of VSa2"
FT   CDS             join(250199..250408,250412..250513)
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0227"
FT                   /old_locus_tag="TVS4261"
FT                   /product="transposase (pseudogene)"
FT                   /note="Similar to Pseudoalteromonas haloplanktis (strain
FT                   TAC 125) putative orphan protein putative transposase.
FT                   UniProt:Q3IIG2 (EMBL:CR954246) (99 aa) fasta scores:
FT                   E()=2.3e-06, 30.526% id in 95 aa. CDS contains a
FT                   translational stop codon (TAA) after codon 70"
FT                   /db_xref="PSEUDO:CAQ80981.1"
FT                   /inference="similar to sequence:UniProt:Q3IIG2"
FT   CDS             250510..250857
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0228"
FT                   /old_locus_tag="TVSa0088"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR008878"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN4"
FT                   /protein_id="CAQ80982.1"
FT                   /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI
FT                   FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL
FT                   GHQPVHYQTTL"
FT   CDS             250929..252416
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0229"
FT                   /old_locus_tag="TVSa0089"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR004291"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGR2"
FT                   /protein_id="CAQ80983.1"
FT                   /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS
FT                   ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC
FT                   CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK
FT                   GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL
FT                   HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY
FT                   HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKGKTGSADWVLS
FT                   KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT
FT                   LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA
FT                   KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV"
FT   repeat_region   252409..252432
FT                   /note="IR of VSa2"
FT   CDS             complement(252511..253752)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0230"
FT                   /old_locus_tag="TVS4257"
FT                   /product="sodium/dicarboxylate symporter"
FT                   /db_xref="GOA:B6EQK9"
FT                   /db_xref="InterPro:IPR002155"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQK9"
FT                   /protein_id="CAQ80984.1"
FT                   /translation="MSPAQPLLVRMMNTNIVLQILVGIIAGVALAVLAPDLAVSAGLFG
FT                   QLFVSALKAVAPILVFILVASSIANQKRGQDSNMKPVVVLYLVGTFCASLTAVAMSFIF
FT                   PTTLSLVTDAATNSAPEGIMEVLHTLLFKIIDNPINALMTGNFIGILGWAIALGLGLHS
FT                   ASDATKKVFIDLSNCISSIVTVVIRFAPIGIFGLVSSTFAETGFDALAGYSHLLAVLLG
FT                   SMAFIALVVNPLIVFIRTKRNPYPLVFLCLRESGVTAFFTRSSAANIPVNMALCERLNL
FT                   HKDTYSVSIPLGATINMAGAAITITVLTLAAVHTVGVQVDLPTALLLSLVAAVSACGAS
FT                   GVAGGSLLLIPLACSLFGIPNEIAMQVVAVGFIIGVVQDSAETALNSSTDVLFTTAACR
FT                   TAENPYKPLIQETN"
FT   misc_feature    complement(252565..253707)
FT                   /locus_tag="VSAL_II0230"
FT                   /note="HMMPfam hit to PF00375, Sodium:dicarboxylate
FT                   symporter family, score 2.6e-127"
FT                   /inference="protein motif:HMMPfam:PF00375"
FT   misc_feature    complement(order(252619..252687,252706..252774,
FT                   252817..252885,253039..253107,253144..253212,
FT                   253270..253338,253441..253509,253546..253614,
FT                   253651..253719))
FT                   /locus_tag="VSAL_II0230"
FT   misc_feature    complement(252718..252759)
FT                   /locus_tag="VSAL_II0230"
FT                   /note="PS00099 Thiolases active site."
FT                   /inference="protein motif:ProSite:PS00099"
FT   misc_feature    complement(252805..252837)
FT                   /locus_tag="VSAL_II0230"
FT                   /note="PS00435 Peroxidases proximal heme-ligand signature."
FT                   /inference="protein motif:ProSite:PS00435"
FT   sig_peptide     complement(253660..253752)
FT                   /locus_tag="VSAL_II0230"
FT   CDS             253944..254885
FT                   /transl_table=11
FT                   /gene="cheV"
FT                   /locus_tag="VSAL_II0231"
FT                   /old_locus_tag="TVS4256"
FT                   /product="chemotaxis protein CheV"
FT                   /db_xref="GOA:B6EQL0"
FT                   /db_xref="InterPro:IPR002545"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQL0"
FT                   /protein_id="CAQ80985.1"
FT                   /translation="MSGMLSSVDQRTQLVGENRLELLLFKLNTAQIFAINVFKVKEILK
FT                   VPKLTRLPGSHHHIAGVASLRGESVPVIDLRGAIGMKPMEIDEDTNLIITEYNRSTQGF
FT                   LVGQVQNIINTTWADIQPPPKTVGRHNYLTAITQVEVEPKQSRIVEIIDVEKVLAEIID
FT                   YDISISEGVLDENLIHHMHGRKVLTVDDSSTARAQVRSTLQQLGLEVIECSDGLQALNL
FT                   LKRWCDEGKVVTDEILLMITDAEMPEMDGYRLTHEIRNDPRMRDLFITLNTSLSGSFND
FT                   AMVQKVGCDRFISKFQPDLIVGVVQDRLSQII"
FT   misc_feature    254004..254429
FT                   /gene="cheV"
FT                   /locus_tag="VSAL_II0231"
FT                   /note="HMMPfam hit to PF01584, CheW-like domain, score
FT                   6.5e-30"
FT                   /inference="protein motif:HMMPfam:PF01584"
FT   misc_feature    254493..254861
FT                   /gene="cheV"
FT                   /locus_tag="VSAL_II0231"
FT                   /note="HMMPfam hit to PF00072, Response regulator receiver
FT                   domain, score 6.1e-09"
FT                   /inference="protein motif:HMMPfam:PF00072"
FT   CDS             complement(255229..257208)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0232"
FT                   /old_locus_tag="TVS4255"
FT                   /product="putative alpha amylase"
FT                   /note="Similar to Sulfolobus acidocaldarius Glycogen
FT                   debranching enzyme (Amylase) TreX UniProt:O05152 (713 aa)
FT                   fasta scores: E()=3.7e-85, 38.576% id in 674 aa"
FT                   /db_xref="GOA:B6EQL1"
FT                   /db_xref="InterPro:IPR013783"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQL1"
FT                   /inference="similar to sequence:UniProt:O05152"
FT                   /protein_id="CAQ80986.1"
FT                   /translation="MLFIQRYIVITNQAFPYPLGANLKAHGCNFSVHYASDYPLTLVIF
FT                   NNDGSHQEYPFTEEYGAIKYTFIEGVTAGCIYAFKIIKDKEELLLLDPYAKALANTPHY
FT                   QTPYTSEQSWTLAQSVVINNEFDWQQTSRPMIPHSETILLETHVKGFTLLNTKVKEEVR
FT                   GTYLGLADPANIAHLKQQGITSIQLLPVAACMHEPHLLDMKMVNYWGYNPLSFMAPDPR
FT                   YAKNDAVIELKTAVRELHKNNIEVILDVVYNHTAEGGNGGSIFNLKGLDQDYYLHHHGN
FT                   YTNYTGCGNTLDITHQASLNLVMDTLRYWVEQYHIDGFRFDLAATLGREYDQFNPNNAF
FT                   FKAVAQDPILQRVKMIAEPWDIGPNGYQVGEFPDGWNECCDKYRDTTKSFWRGEQNHIK
FT                   SLATRLMGSRDLVSASRWPHKLPVNYVSYHDGFTLQDLVSYKDRHNHANGENNRDGHGD
FT                   NRSDNYGIEGTTSNPRIIALREKQKRNMMTTLLFSFGIPHLLAADACSHTQQGNNNAYC
FT                   QDSTISWVNWSLNRNAKEFKAWLAEMIHARQTHMAPIINAFSGSRRNGQKVEWYAPDGH
FT                   VMNHSDWHGAKSLCLHLNVDNGNKELLIIINQANTATQFILPEATEQRRWLLICDTQYN
FT                   KLTSKQTLFDYSLSPLSIAIFATQ"
FT   misc_feature    complement(255568..256776)
FT                   /locus_tag="VSAL_II0232"
FT                   /note="HMMPfam hit to PF00128, Alpha amylase, catalytic
FT                   domain, score 1.3e-09"
FT                   /inference="protein motif:HMMPfam:PF00128"
FT   misc_feature    complement(256924..257157)
FT                   /locus_tag="VSAL_II0232"
FT                   /note="HMMPfam hit to PF02922, Isoamylase N-terminal
FT                   domain, score 0.054"
FT                   /inference="protein motif:HMMPfam:PF02922"
FT   CDS             complement(257257..257691)
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="malK"
FT                   /locus_tag="VSAL_II0233"
FT                   /old_locus_tag="TVS4254"
FT                   /product="maltose/maltodextrin transport ATP-binding
FT                   protein (fragment)"
FT                   /EC_number="3.6.3.19"
FT                   /note="Similar to Vibrio cholerae Maltose/maltodextrin
FT                   import ATP-binding protein MalK UniProt:Q9KL04 (373 aa)
FT                   fasta scores: E()=3.7e-34, 67.133% id in 143 aa. CDS is
FT                   truncated by the insertion of the upstream IS element and
FT                   subsequent recombination events"
FT                   /inference="similar to sequence:UniProt:Q9KL04"
FT   misc_feature    complement(257308..257526)
FT                   /gene="malK"
FT                   /locus_tag="VSAL_II0233"
FT                   /note="HMMPfam hit to PF08402, TOBE domain, score 1.1e-07"
FT                   /inference="protein motif:HMMPfam:PF08402"
FT   misc_feature    complement(257311..257493)
FT                   /gene="malK"
FT                   /locus_tag="VSAL_II0233"
FT                   /note="HMMPfam hit to PF03459, TOBE domain, score 2.3e-08"
FT                   /inference="protein motif:HMMPfam:PF03459"
FT   misc_feature    complement(257497..257661)
FT                   /gene="malK"
FT                   /locus_tag="VSAL_II0233"
FT                   /note="HMMPfam hit to PF03459, TOBE domain, score 1e-06"
FT                   /inference="protein motif:HMMPfam:PF03459"
FT   repeat_region   257693..260007
FT                   /note="VSa2"
FT   repeat_region   257693..257716
FT                   /note="IR of VSa2"
FT   CDS             257774..258088
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0234"
FT                   /old_locus_tag="TVS4253"
FT                   /product="transposase"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN3"
FT                   /protein_id="CAQ80988.1"
FT                   /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA
FT                   RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS
FT                   "
FT   CDS             258085..258432
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0235"
FT                   /old_locus_tag="TVSb0081"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR008878"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN4"
FT                   /protein_id="CAQ80989.1"
FT                   /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI
FT                   FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL
FT                   GHQPVHYQTTL"
FT   CDS             258504..259991
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0236"
FT                   /old_locus_tag="TVSb0082"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR004291"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQL4"
FT                   /protein_id="CAQ80990.1"
FT                   /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS
FT                   ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC
FT                   CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK
FT                   GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL
FT                   HRILIEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY
FT                   HPVNFLKGYNGYLHTDGYQGYEQTEAMLVGCWAHARRRFIEAQRVQVKGKTGSADWVLS
FT                   KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT
FT                   LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA
FT                   KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV"
FT   repeat_region   259984..260007
FT                   /note="IR of VSa2"
FT   CDS             complement(260103..260735)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0237"
FT                   /old_locus_tag="TVS4249"
FT                   /product="conserved hypothetical protein"
FT                   /note="Similar to Vibrio fischeri Hypothetical protein
FT                   UniProt:Q5DZB9 (217 aa) fasta scores: E()=2.2e-72, 86.190%
FT                   id in 210 aa. CDS may be truncated by the insertion of the
FT                   downstream IS element and subsequent recombination events"
FT                   /db_xref="InterPro:IPR003848"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQL5"
FT                   /inference="similar to sequence:UniProt:Q5DZB9"
FT                   /protein_id="CAQ80991.1"
FT                   /translation="MSLSLFTQLQRIWDYHLLNQPIKKSDAIFVLCSYDLRVAEHAAQL
FT                   YLDGFAPLVIFSGAQGRATEGLFTLSEAETFANVAKDMGVPSSAILLETKATNTGENIF
FT                   FTQDLLKEKNITLNSLLLVQKPYMERRLLATFLKNWNDIEFCISSPNIRFVDYPTDEVT
FT                   FDHVASIILGELHRLKIYPTLGYQEQQTIPDDVWKAFENLTKLGFDE"
FT   misc_feature    complement(260202..260666)
FT                   /locus_tag="VSAL_II0237"
FT                   /note="HMMPfam hit to PF02698, DUF218 domain, score
FT                   2.4e-34"
FT                   /inference="protein motif:HMMPfam:PF02698"
FT   CDS             260997..262253
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0238"
FT                   /old_locus_tag="TVS4248"
FT                   /product="glucose-1-phosphate adenylyltransferase"
FT                   /EC_number="2.7.7.27"
FT                   /db_xref="GOA:B6EQL6"
FT                   /db_xref="InterPro:IPR011831"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQL6"
FT                   /protein_id="CAQ80992.1"
FT                   /translation="MIVVINNNSLGEEMAGVLGMILAGGEGSRLRPLTESRTKPAVPFG
FT                   GSYRLIDFALNNFVNADLMRIYVLTQFKSQSLFQHMKKGWNVNGITDRFIDPVPAQMRT
FT                   GKRWYEGTADAIYQNISFIESTDPEHVCIFGSDHIYKMDIRQMLDFHKEKEAALTVSAL
FT                   RMPAKDASEFGVIEVDEDGKMIGFEEKPANPKCIPGQPGIALVSMGNYIFEAENLCREL
FT                   EIDAENTASSHDFGKDIIPKMFPVGNVYVYDFSTNKITGEKEEVYWRDVGSIDSYWEAH
FT                   MDLLKKDAPFSLYNRKWPLHTYYPPLPPATFTDSANGRVQIIDSLVCGGSYVRGSRIEK
FT                   SVLGFLSNIASACDISESILLGDVKIGEGCVLRRVIIDKGADIAPGTEIGVNLQEDKKK
FT                   YHVSDQGIVVIPKGERIGY"
FT   misc_feature    261048..261857
FT                   /locus_tag="VSAL_II0238"
FT                   /note="HMMPfam hit to PF00483, Nucleotidyl
FT                   transferase,score 1e-75"
FT                   /inference="protein motif:HMMPfam:PF00483"
FT   misc_feature    261318..261344
FT                   /locus_tag="VSAL_II0238"
FT                   /note="PS00809 ADP-glucose pyrophosphorylase signature 2."
FT                   /inference="protein motif:ProSite:PS00809"
FT   misc_feature    261612..261644
FT                   /locus_tag="VSAL_II0238"
FT                   /note="PS00810 ADP-glucose pyrophosphorylase signature 3."
FT                   /inference="protein motif:ProSite:PS00810"
FT   CDS             262243..263691
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0239"
FT                   /old_locus_tag="TVS4247"
FT                   /product="glycogen synthase"
FT                   /EC_number="2.4.1.21"
FT                   /db_xref="GOA:B6EQL7"
FT                   /db_xref="InterPro:IPR013534"
FT                   /db_xref="UniProtKB/Swiss-Prot:B6EQL7"
FT                   /protein_id="CAQ80993.1"
FT                   /translation="MATKTLSILFAASEVEGLIKSGGLADVAKALPKSLKDLGHEIHIA
FT                   MPAYSAIPERDDAEVLLSSTLEHWPHTPYQVRSLSVEGITVLGIECADYFDRAEMYAEN
FT                   NQAYADNGERFAFFSAACLDMLPKLKIKPDVIHANDWHTGLLPYLLKKRYANDAYFSQV
FT                   RSVLSVHNAVFKGIFHYDDIGCLSEFKTHYVPEAAVSHTHISMLKAGVQCADKINAVSP
FT                   TYAKELLTELGSHGMASDFQAREPDLFGILNGCDYSEWSPETDTFIPKQFKANRISMVR
FT                   GKKVCKAALQEEVGLPQKEVAMYGMVCRLTNQKGIHYLLPILEQFLKHDLQIVIVGTGD
FT                   PVLAAQLTEIAAIHSDKFAFVEAYSNKLAHWIEASSDFFLMPSEFEPCGLNQIYSMSYG
FT                   ALPIVRAVGGLKDSVIDYDSDNENATGFSFINPEPTELLLVLMRSLLLYAQDLNEVKRI
FT                   QLHAMKQNFSWSDAAEKYVEMYLD"
FT   misc_feature    262294..262971
FT                   /locus_tag="VSAL_II0239"
FT                   /note="HMMPfam hit to PF08323, Starch synthase catalytic
FT                   domain, score 1.2e-74"
FT                   /inference="protein motif:HMMPfam:PF08323"
FT   misc_feature    263104..263619
FT                   /locus_tag="VSAL_II0239"
FT                   /note="HMMPfam hit to PF00534, Glycosyl transferases group,
FT                   score 4e-10"
FT                   /inference="protein motif:HMMPfam:PF00534"
FT   CDS             263816..264478
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0240"
FT                   /old_locus_tag="TVS4246"
FT                   /product="membrane protein"
FT                   /db_xref="InterPro:IPR010699"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQL8"
FT                   /protein_id="CAQ80994.1"
FT                   /translation="MISKLPKWVEYGTFFLALLAGITNSVGLLGFQHQSISHLSGTATL
FT                   LGTQLLAFDGTTLHLFYIIVSFVLGSSLSSLIVGCSALKLGRRYNFALLIESLFLFAAM
FT                   VILNEGSQWGHYFASAACGLQNGLVTTYSGAVVRTTHVTGVFTDLGIMLGMKLKGEVIH
FT                   RRRLALYLFIAFGFIFGGVIGGYFYPILGINTLAIPATLCALLALSYSLYLFQHPDH"
FT   misc_feature    order(263837..263905,263993..264061,264080..264136,
FT                   264218..264277,264314..264382,264392..264460)
FT                   /locus_tag="VSAL_II0240"
FT   misc_feature    263843..264448
FT                   /locus_tag="VSAL_II0240"
FT                   /note="HMMPfam hit to PF06912, Protein of unknown function
FT                   (DUF1275), score 9.5e-32"
FT                   /inference="protein motif:HMMPfam:PF06912"
FT   repeat_region   264527..266841
FT                   /note="VSa2"
FT   repeat_region   264527..264550
FT                   /note="IR of VSa2"
FT   CDS             264608..264922
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0241"
FT                   /old_locus_tag="TVS4245"
FT                   /product="transposase"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN3"
FT                   /protein_id="CAQ80995.1"
FT                   /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA
FT                   RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS
FT                   "
FT   CDS             264919..265266
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0242"
FT                   /old_locus_tag="TVSb0083"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR008878"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN4"
FT                   /protein_id="CAQ80996.1"
FT                   /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI
FT                   FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL
FT                   GHQPVHYQTTL"
FT   CDS             265338..266825
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0243"
FT                   /old_locus_tag="TVS4242"
FT                   /old_locus_tag="TVSa0094"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR004291"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQM1"
FT                   /protein_id="CAQ80997.1"
FT                   /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS
FT                   ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC
FT                   CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQASMPASPIPK
FT                   GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL
FT                   HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY
FT                   HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKGKTGSADWVLS
FT                   KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT
FT                   LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA
FT                   KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKDKV"
FT   repeat_region   266818..266841
FT                   /note="IR of VSa2"
FT   CDS             complement(join(266844..267902,267901..268113))
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0244"
FT                   /old_locus_tag="TVS4240"
FT                   /product="molybdopterin oxidoreductase (pseudogene)"
FT                   /note="Similar to Photobacterium profundum Hypothetical
FT                   nitrate reductase large subunit UniProt:Q6LP69 (898 aa)
FT                   fasta scores: E()=7.5e-96, 63.158% id in 380 aa. CDS
FT                   contains a frameshift after codon 71 and is truncated by
FT                   the insertion of the downstream IS element. The sequence
FT                   has been checked and is believed to be correct"
FT                   /inference="similar to sequence:UniProt:Q6LP69"
FT   misc_feature    complement(order(267294..267902,267901..268113))
FT                   /locus_tag="VSAL_II0244"
FT                   /note="HMMPfam hit to PF00384, Molybdopterin
FT                   oxidoreductase, score 1.8e-14"
FT                   /inference="protein motif:HMMPfam:PF00384"
FT   misc_feature    complement(268033..268089)
FT                   /locus_tag="VSAL_II0244"
FT                   /note="PS00551 Prokaryotic molybdopterin oxidoreductases
FT                   signature 1."
FT                   /inference="protein motif:ProSite:PS00551"
FT   CDS             268428..271004
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0245"
FT                   /old_locus_tag="TVS4239"
FT                   /product="nitrite reductase large subunit"
FT                   /db_xref="GOA:B6EQM2"
FT                   /db_xref="InterPro:IPR017121"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQM2"
FT                   /protein_id="CAQ80999.1"
FT                   /translation="MALSLLNVFIHFTKERLMRKQRIVVIGNGMVGHKFIETLLASGQE
FT                   NNEVITFSEESRLAYDRVQLTSYLTGKTADDLALTTDTYYQENGVNFILNEKVTVIDIE
FT                   NKQVITESGRTELYDKLVLATGSFPFVPPIPGNDQEHCHVYRTLDDLDAIEASSKKSKK
FT                   GVVIGGGLLGLEAANAVKNLGLETHVVEFAPRLMAVQLDDGGGALLRRKIEGLGVVVHT
FT                   EKATTEIVAGKESRYRMNFVDGSYLETDMIVFSAGIRPQDALAKETDIQLGERGGIAIN
FT                   NQCQTSVESIYAIGECALWQQQIFGLVAPGYQMAKVAANHILGKKAEFSGADMSTKLKL
FT                   LGVDVASIGDVHGKTKGAQSYTYHDEIEQIYKRLIISKDGKKIVGAVLVGDAEAYGTLL
FT                   QIKQNDMALPAQPSVLILPNVKDDESAGMGVEALPDAAVICSCFDVKKGDIKQAVASGF
FT                   TSMIMLKESTNASTGCGGCSTLAKQILDSELSQLGVEVNNHLCEHFSYSRQEMVDIIRI
FT                   NKIKTFDEILESHGSGLGCITCKPTVGSILASFWNDYVLEDNLAELQDTNDIYLGNMQK
FT                   DGTYSVVPRIAGGEITPDKLIVLGEVAKEFGLYTKITGGQRVDLFGAHLSELPVIWKKL
FT                   IDAGFETGHAYGKSVRTVKSCVGSTWCRYGVNDSVGLAIKLENRYKGLRSPHKIKFAVS
FT                   GCTRECAEAQSKDIGVIATDRGWNLYVCGNGGMRPRHGDLFVTDLDESTLVQYIDRLLM
FT                   FYIRTADRLQRTSVWLENLEGGLEYLRSVIVDDSLNLGETLEAEMEHNIAQYQCEWKTT
FT                   IEDPEKLKRFQHFINSKETDDGVEFVKQREQKFPKAKSDSLLLKSR"
FT   misc_feature    268491..269333
FT                   /locus_tag="VSAL_II0245"
FT                   /note="HMMPfam hit to PF07992, Pyridine
FT                   nucleotide-disulphide oxidoredu, score 6e-45"
FT                   /inference="protein motif:HMMPfam:PF07992"
FT   misc_feature    268491..268805
FT                   /locus_tag="VSAL_II0245"
FT                   /note="HMMPfam hit to PF00070, Pyridine
FT                   nucleotide-disulphide oxidoredu, score 0.00077"
FT                   /inference="protein motif:HMMPfam:PF00070"
FT   misc_feature    268914..269198
FT                   /locus_tag="VSAL_II0245"
FT                   /note="HMMPfam hit to PF00070, Pyridine
FT                   nucleotide-disulphide oxidoredu, score 5.1e-19"
FT                   /inference="protein motif:HMMPfam:PF00070"
FT   misc_feature    269736..269894
FT                   /locus_tag="VSAL_II0245"
FT                   /note="HMMPfam hit to PF04324, BFD-like [2Fe-2S] binding
FT                   domain, score 1.2e-15"
FT                   /inference="protein motif:HMMPfam:PF04324"
FT   misc_feature    270138..270341
FT                   /locus_tag="VSAL_II0245"
FT                   /note="HMMPfam hit to PF03460, Nitrite/Sulfite reductase
FT                   ferredoxin-lik, score 2.7e-18"
FT                   /inference="protein motif:HMMPfam:PF03460"
FT   misc_feature    270363..270803
FT                   /locus_tag="VSAL_II0245"
FT                   /note="HMMPfam hit to PF01077, Nitrite and sulphite
FT                   reductase 4Fe-4S do, score 8e-47"
FT                   /inference="protein motif:HMMPfam:PF01077"
FT   misc_feature    270507..270557
FT                   /locus_tag="VSAL_II0245"
FT                   /note="PS00365 Nitrite and sulfite reductases
FT                   iron-sulfur/siroheme-binding site."
FT                   /inference="protein motif:ProSite:PS00365"
FT   CDS             271060..271356
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0246"
FT                   /old_locus_tag="TVS4238"
FT                   /product="nitrite reductase [NAD(P)H] small subunit"
FT                   /EC_number="1.7.1.4"
FT                   /db_xref="GOA:B6EQM3"
FT                   /db_xref="InterPro:IPR017881"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQM3"
FT                   /protein_id="CAQ81000.1"
FT                   /translation="MTPQLGACAKVLNHQVAVFYCKRSERLYALSNYDPIGKANVISRG
FT                   MMGSLEGEPYISSPLYKHHFHLETGVCIEFPEVILTTYPVRMSDNQIQIKLAH"
FT   CDS             271366..272835
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0247"
FT                   /old_locus_tag="TVS4237"
FT                   /product="nitrate transporter"
FT                   /db_xref="GOA:B6EQM4"
FT                   /db_xref="InterPro:IPR011701"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQM4"
FT                   /protein_id="CAQ81001.1"
FT                   /translation="MMDDKFSLFSFSGKMKTLHLSWMAFFITFMVWFNFAPLLQMVKET
FT                   LELSTEEIKTLLILNVALTIPARVIIGMLTDKYGPRLVYSILLAVCSIPCFMFAFADSF
FT                   IEAAIARFLLGFIGAGFVIGIRLVSEWFPHHELGTAEGIYGGWGNFGSAVAAFSLPTLA
FT                   LWFGGDEGWRYAVAITGAMSLLFSFIFYSQVTDTPKGATYFKPTHSTAMEVTSIGDFYF
FT                   LLIMKIPMYAALALLTWKLSSSGIGMLSDTVVNGVYLLLVGIYIYEITQVWKVNKTIFY
FT                   NDVAPHHQYKFKQVAVLNVLYFATFGSELAVISMLPLFFSDTFELTPVMAGMVASAYAF
FT                   MNLMSRPGGGWISDKFGRKPTLLILTAGLAVGYFLMGQVNSEWPLWLAVAAAMGCSFFV
FT                   QAGEGAVFATVPLIKRRMTGQIAGMTGAYGNVGAVVYLTILSFVDYQTFFFVIAVTAVL
FT                   GFVVLLKMEEPSGKITEVNEDGSITLIDVSH"
FT   misc_feature    order(271423..271491,271528..271581,271609..271665,
FT                   271684..271752,271795..271863,271882..271950,
FT                   272098..272166,272257..272325,272353..272421,
FT                   272440..272493,272521..272589,272626..272694,
FT                   272704..272757)
FT                   /locus_tag="VSAL_II0247"
FT   misc_feature    271426..272700
FT                   /locus_tag="VSAL_II0247"
FT                   /note="HMMPfam hit to PF07690, Major Facilitator
FT                   Superfamily, score 2.4e-38"
FT                   /inference="protein motif:HMMPfam:PF07690"
FT   misc_feature    272410..272463
FT                   /locus_tag="VSAL_II0247"
FT                   /note="PS00216 Sugar transport proteins signature 1."
FT                   /inference="protein motif:ProSite:PS00216"
FT   CDS             272873..274645
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0248"
FT                   /old_locus_tag="TVS4236"
FT                   /product="putative membrane associated protein kinase"
FT                   /db_xref="GOA:B6EQM5"
FT                   /db_xref="InterPro:IPR017442"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQM5"
FT                   /protein_id="CAQ81002.1"
FT                   /translation="MKSTLQTSKDLILRVGGNSTQGKRESNQDAFIVKQTSLSELQFKG
FT                   HVACIADGVSCSDKGQQASHTAVTQFVEDYFSTPDSWGVKQAATTILATINTWLYQQQN
FT                   EHDLQHNGWLTTFSSVIIKSNTAHVFHVGDSRVSLYRHGKLKSLTKDHQRRGAGQHRYL
FT                   TRALGMDTTIDVDYQAISLEQGDLLLLTTDGVHEALNSYVLNSELTATKEKTFPLDSIA
FT                   ANLCDLAIKKGSQDNCSCLLIDVVELPDKSPQELLERFEHYPIPPVLTVGQKIDQYRVQ
FT                   RILYSGVRSHVYQVMDENTLERYVLKAPSQQFAEDSDYLCSFIREQWIGEKVNSDRIMI
FT                   IHPQLSEVSFLYHVCAYLEGITLRQWMFDNPKPSLEQVRTLINGVMKAVRVLQRLHIVH
FT                   RDLKPENIMIMPTGNVILIDFGAATADGFDEVLPTIENECPLGEINYCAPEYINGEKAT
FT                   HQSDIFSIGVICYELLAKVTLSDNSLPYKQTTQQYLQAKRHQSWDYHSLLFQREELPVW
FT                   IDEAIKKACHPLPSQRYQSMSEFMADLTVPNPQLLRNKKAQALIDRDPILFWKGLSIIL
FT                   SITVLIELGLLLSS"
FT   misc_feature    272909..273586
FT                   /locus_tag="VSAL_II0248"
FT                   /note="HMMPfam hit to PF00481, Protein phosphatase 2C,score
FT                   4.5e-05"
FT                   /inference="protein motif:HMMPfam:PF00481"
FT   misc_feature    273704..274504
FT                   /locus_tag="VSAL_II0248"
FT                   /note="HMMPfam hit to PF00069, Protein kinase domain,score
FT                   1.7e-12"
FT                   /inference="protein motif:HMMPfam:PF00069"
FT   misc_feature    274061..274099
FT                   /locus_tag="VSAL_II0248"
FT                   /note="PS00108 Serine/Threonine protein kinases active-site
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00108"
FT   misc_feature    274568..274636
FT                   /locus_tag="VSAL_II0248"
FT   CDS             274816..276681
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0249"
FT                   /old_locus_tag="TVS4235"
FT                   /product="putative exported protein"
FT                   /note="Expression may be stress-induced and may be
FT                   regulated by Fur"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQM6"
FT                   /protein_id="CAQ81003.1"
FT                   /translation="MKPSYSIPCIVALSIALGFSAQLQAAVPFASCPSQAFMVQNPSGT
FT                   PVAYGISLDVGSYSTLSWKVGDGKINGIGYNVHDDYIYGWDYGAQTLTQIGSDFISTPL
FT                   SVSNLQVGPTSFYVGDVSTIENSWYGYRVNKGFFRIDLDTLEMTKVASSATVGNLRILD
FT                   MAFHPDDGIIYSVDNYGYLYKIDPSTGSGTKLNQVINSNSVGHSLSFGAQYFDVDGNLY
FT                   LSNNGNGYIYIVSIDDLNSSSAFFAYGPSSNSNDGARCAFAPVGQNENSDFGDAPDTYG
FT                   TLYDSFGARHAISGLKLGALVDGESEAYAYPLSDDTSDLSNDDDGISFPVPLEIEETSF
FT                   IYAEVDGADGEGVLSAWIDWDQDGEFNDDEIILNSEWVDDGQNQLYFEVPSWALSGDTW
FT                   ARFRLSHSYDIGPNGGVSAGEVEDYQVTVTDQGVSVELYPAGSGYTTFAYEDLWSFTES
FT                   GEDDGCNMFRTESGCGTDYRPSWSLIIPLETPIPQAQMPDFPYDPFIFATPGYYYGEYG
FT                   LQVSGGHPGRNVEVHLKNQMPTSKFNNGYIGKSDDATNTGNGTYFHTSNGLPWAIEIPL
FT                   DWKHPIESVSILEAYPQFADFAQDATGQTAPDWYVNPTASSIYID"
FT   sig_peptide     274816..274890
FT                   /locus_tag="VSAL_II0249"
FT   CDS             276693..277187
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0250"
FT                   /old_locus_tag="TVS4234"
FT                   /product="putative lipoprotein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQM7"
FT                   /protein_id="CAQ81004.1"
FT                   /translation="MNSITNKVNRLFLIFILSLLAACNSESGGSGGSGGTNSLGSSPSE
FT                   TPEPSASPMSVFDLEISAENSLHSVYNLEIDVDISEISTKRAFISICDNSIAKGDLSKV
FT                   DFDMCLLKGNLNEGVGVFELRVANHCEELITLIWIMEKDREPLIYTLSHDNQKESYWLI
FT                   N"
FT   sig_peptide     276693..276788
FT                   /locus_tag="VSAL_II0250"
FT   misc_feature    276729..276761
FT                   /locus_tag="VSAL_II0250"
FT                   /note="PS00013 Prokaryotic membrane lipoprotein lipid
FT                   attachment site."
FT                   /inference="protein motif:ProSite:PS00013"
FT   CDS             complement(277234..278424)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0251"
FT                   /old_locus_tag="TVS4233"
FT                   /product="hypothetical protein"
FT                   /db_xref="GOA:B6EQM8"
FT                   /db_xref="InterPro:IPR017442"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQM8"
FT                   /protein_id="CAQ81005.1"
FT                   /translation="MHTLAQLQSGELQGITRLQLSENLTEFPLEILSLSDSLEILDLSN
FT                   NQLTTLPKEITQLSKLKIFFASNNSFTEFPEVLAHCKNLEMIGFKSCQISNVPENVFPT
FT                   KLRWLILTDNQIEALPNSLGDCHLMQKLALAGNRLTTLPSNLSQLHNLELLRISANQLT
FT                   KCPEQLFDLPKLAWFAFAGNPFCKSNLQVKSVPSITSSDYTLEKVLGQGASGVISKARW
FT                   NKEQTDFPQDIAIKVFKGEVTSDGYPEDELQACLKVGNHPSVVQSLAQVNEDNYLALIM
FT                   SLIPAHYKNLGLPPSLESCTRDTFPEGFSLPLEHINKMVAEMRNIFEHLHDNQVCHGDL
FT                   YAHNTLFDEEANIIFGDFGAASMYHMLTDSQQQKIRAIEERALNYFIDDLMSICLK"
FT   misc_feature    complement(277237..277818)
FT                   /locus_tag="VSAL_II0251"
FT                   /note="HMMPfam hit to PF00069, Protein kinase domain,score
FT                   0.00011"
FT                   /inference="protein motif:HMMPfam:PF00069"
FT   misc_feature    complement(277390..277413)
FT                   /locus_tag="VSAL_II0251"
FT                   /note="PS00881 Protein splicing signature."
FT                   /inference="protein motif:ProSite:PS00881"
FT   misc_feature    complement(277717..277800)
FT                   /locus_tag="VSAL_II0251"
FT                   /note="PS00107 Protein kinases ATP-binding region
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00107"
FT   misc_feature    complement(277909..277974)
FT                   /locus_tag="VSAL_II0251"
FT                   /note="HMMPfam hit to PF00560, Leucine Rich Repeat, score
FT                   4.1"
FT                   /inference="protein motif:HMMPfam:PF00560"
FT   misc_feature    complement(278047..278112)
FT                   /locus_tag="VSAL_II0251"
FT                   /note="HMMPfam hit to PF00560, Leucine Rich Repeat, score
FT                   0.43"
FT                   /inference="protein motif:HMMPfam:PF00560"
FT   misc_feature    complement(278182..278247)
FT                   /locus_tag="VSAL_II0251"
FT                   /note="HMMPfam hit to PF00560, Leucine Rich Repeat, score
FT                   9.1"
FT                   /inference="protein motif:HMMPfam:PF00560"
FT   misc_feature    complement(278251..278316)
FT                   /locus_tag="VSAL_II0251"
FT                   /note="HMMPfam hit to PF00560, Leucine Rich Repeat, score
FT                   0.0088"
FT                   /inference="protein motif:HMMPfam:PF00560"
FT   CDS             complement(278788..280092)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0252"
FT                   /old_locus_tag="TVS4232"
FT                   /product="putative extracellular protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQM9"
FT                   /experiment="The expressed protein is found to be exported
FT                   (extracellular) by Aliivibrio salmonicida"
FT                   /protein_id="CAQ81006.1"
FT                   /translation="MKRMITATSALVTLALYTGAVNAGQYMNGHRVELKGDKNIDYPQL
FT                   CIRINRKAQRIPLLETYQQFQTDYPDDTTAELLKRMVAWADSGAVGHTWVDLFYKDDNG
FT                   KIKADGYGFGSDGNQETREFSFQKCVHIEDKDHEQIKQEINNKQEALYVESKEIAKLFF
FT                   NIGKDWNGGRYTLYGNCAWFAGELFNSLVPKKEKINFAQAFDWSTIVPTLLPLSKLKDL
FT                   PDPGYIAESLSQTINSAGWYDNDNAGFGKITGDTFIIADADGLVTGPRSIIDYYPGLKD
FT                   YATFISAGYYSESQNRMHFFTYNLKQDVEITTKPYSSDASFKNINQKFVAAFHHPSDDT
FT                   IGMAITEEGNILDIDSLEKMENSALQEYAGEITAASNYFEGDKILILLRPDGNQYDDHQ
FT                   SNGVRFVKYDFEHDKVLTEPKLAENLSGFDFFKLQ"
FT   sig_peptide     complement(280024..280092)
FT                   /locus_tag="VSAL_II0252"
FT   CDS             complement(280345..281604)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0253"
FT                   /old_locus_tag="TVS4231"
FT                   /product="putative 3-hydroxy-3-methylglutaryl coenzyme a
FT                   reductase"
FT                   /note="Similar to Vibrio sp. 14a09 Putative
FT                   3-hydroxy-3-methylglutaryl coenzyme A reductase
FT                   UniProt:Q2UXT1 (218 aa) fasta scores: E()=1.2e-72, 91.743%
FT                   id in 218 aa"
FT                   /db_xref="GOA:B6EQN0"
FT                   /db_xref="InterPro:IPR002202"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQN0"
FT                   /inference="similar to sequence:UniProt:Q2UXT1"
FT                   /protein_id="CAQ81007.1"
FT                   /translation="MPKLNLHRRDYVSILGGDISADELEQMLNPHFDKPTNKLTPSPYL
FT                   TDKNITRRWDKLANPALQAELLDVHTQAQSHVYEKNIEHFIGTVKIPVGLAGPLRVNGL
FT                   FAKGDYLVPLATTEAALVASYNRGAQLITACGGASAMLLNEGVTRTPAFAFYNLAEAGQ
FT                   FVTWAVTQYDTFKQLAEATTSHGKLSDINISIEGNHVYLVFEFLTGDASGQNMVTIATN
FT                   AIFNYIIDNSPIASENAYLDGNLSGDKKASSQSLRSVRGKKVTAEVHVPAELVKKYLHT
FT                   TPEKMMQFTQMSTVGATLSGTIGINAHYANALAALYIACGQDAACVAESAVGMTRIEVN
FT                   RDGGLYASVTLPNLMLGTVGGGTGLPSQKACLELMGLYGSGKSQALAEVCATLCLAGEL
FT                   SIVGAFCAGHFSRAHHKLAR"
FT   misc_feature    complement(280348..281553)
FT                   /locus_tag="VSAL_II0253"
FT                   /note="HMMPfam hit to
FT                   PF00368,Hydroxymethylglutaryl-coenzyme A reductas, score
FT                   7.4e-61"
FT                   /inference="protein motif:HMMPfam:PF00368"
FT   misc_feature    complement(280456..280479)
FT                   /locus_tag="VSAL_II0253"
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    complement(280516..280539)
FT                   /locus_tag="VSAL_II0253"
FT                   /note="PS00318 Hydroxymethylglutaryl-coenzyme A reductases
FT                   signature 2."
FT                   /inference="protein motif:ProSite:PS00318"
FT   CDS             281869..283794
FT                   /transl_table=11
FT                   /gene="speA"
FT                   /locus_tag="VSAL_II0254"
FT                   /old_locus_tag="TVS4230"
FT                   /product="biosynthetic arginine decarboxylase"
FT                   /EC_number="4.1.1.19"
FT                   /db_xref="GOA:B6EQN1"
FT                   /db_xref="InterPro:IPR002985"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQN1"
FT                   /protein_id="CAQ81008.1"
FT                   /translation="MRSLDLEHSVNLERIRAEYNVKHWSQGFYGIDDNGEVYVSPRSDT
FT                   DHQVPLSHIVNQLEQRNIGLPALVRFPQIVHQRVHSICNAFNQAIDEYQYENHYLLVYP
FT                   IKVNQQKEVVDEILASQAQLEQKQLGLEAGSKPELLAVLALAQKASSVIVCNGYKDREY
FT                   VRLALIGEKLGHSVFIVLEKLSELDLVLSEAKALGVTPRLGLRIRLASQGAGKWQASGG
FT                   EKSKFGLSASQVLTVIDRLKAQGQLDILELVHFHLGSQMANIRDVRNGVSEAARFYCEL
FT                   RDIGAELKYLDVGGGLAVDYDGTRSQSSNSMNYGLTEYARNIVTTIGDICQLYSQPMPV
FT                   IISESGRSLTAHHAVLITNVIGTESYTPEAIEAPHCDAPLLLHNMWRNLEQLENGSDDR
FT                   ALIEIYNDTQCDVSEAHNQFATGMINLQHRAWAEQVSLRINYELSVKMSTKNRYHRPIL
FT                   DELSERLADKFFVNFSLFQSLPDAWGIDQVFPVLPLSGLDNADEHRAVVLDITCDSDGI
FT                   IDQYVDGQGIETTLPVPAWNPDEPYLMGFFLVGAYQEILGDMHNLFGDTHSVVVNVNEN
FT                   GEANIDYINEGDTVEDMMRYVHIDVDLIRQNYKDMVTAKVAKEEQQSVLEELEQGLMGY
FT                   TYLEDF"
FT   misc_feature    282094..282924
FT                   /gene="speA"
FT                   /locus_tag="VSAL_II0254"
FT                   /note="HMMPfam hit to PF02784, Pyridoxal-dependent
FT                   decarboxylase, py, score 6.8e-73"
FT                   /inference="protein motif:HMMPfam:PF02784"
FT   misc_feature    282931..283581
FT                   /gene="speA"
FT                   /locus_tag="VSAL_II0254"
FT                   /note="HMMPfam hit to PF00278, Pyridoxal-dependent
FT                   decarboxylase, C-, score 3e-50"
FT                   /inference="protein motif:HMMPfam:PF00278"
FT   CDS             join(283794..283997,283998..284309,285746..286156)
FT                   /pseudo
FT                   /transl_table=11
FT                   /gene="speB"
FT                   /locus_tag="VSAL_II0255"
FT                   /old_locus_tag="TVS4225"
FT                   /product="agmatinase (pseudogene)"
FT                   /EC_number="3.5.3.11"
FT                   /note="Similar to Escherichia coli Agmatinase SpeB
FT                   UniProt:P60651 (306 aa) fasta scores: E()=2.7e-71, 61.311%
FT                   id in 305 aa. CDS is disrupted by the insertion of an IS
FT                   element after codon 172. In addition the CDS contains a
FT                   frameshift after codon 68. The sequence has been checked
FT                   and is believed to be correct"
FT                   /db_xref="PSEUDO:CAQ81009.1"
FT                   /inference="similar to sequence:UniProt:P60651"
FT   misc_feature    order(283884..283997,283998..284309,285746..286135)
FT                   /gene="speB"
FT                   /locus_tag="VSAL_II0255"
FT                   /note="HMMPfam hit to PF00491, Arginase family, score
FT                   5.7e-93"
FT                   /inference="protein motif:HMMPfam:PF00491"
FT   misc_feature    284103..284228
FT                   /gene="speB"
FT                   /locus_tag="VSAL_II0255"
FT                   /note="PS00041 Bacterial regulatory proteins, araC family
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00041"
FT   misc_feature    284124..284147
FT                   /gene="speB"
FT                   /locus_tag="VSAL_II0255"
FT                   /note="PS00017 ATP/GTP-binding site motif A (P-loop)."
FT                   /inference="protein motif:ProSite:PS00017"
FT   misc_feature    284157..284198
FT                   /gene="speB"
FT                   /locus_tag="VSAL_II0255"
FT                   /note="PS00147 Arginase family signature 1."
FT                   /inference="protein motif:ProSite:PS00147"
FT   misc_feature    284226..284252
FT                   /gene="speB"
FT                   /locus_tag="VSAL_II0255"
FT                   /note="PS00148 Arginase family signature 2."
FT                   /inference="protein motif:ProSite:PS00148"
FT   repeat_region   284305..285744
FT                   /note="VSa9"
FT   CDS             284385..285578
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0256"
FT                   /old_locus_tag="TVS4228"
FT                   /product="transposase"
FT                   /db_xref="GOA:B6EGT7"
FT                   /db_xref="InterPro:IPR007069"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGT7"
FT                   /protein_id="CAQ81010.1"
FT                   /translation="MHAYKPLKQLFNSQNNWLKFLHNNKANLRAVVIENVTKMLSCGTA
FT                   AFGSREYHCCNPDCTHIKYIHQTCKSRACSSCGMKATERWIQKQQHVFPECEYQHITFT
FT                   LPNTLWPIFRHNRWLLNKLFKCAANILLGWAKDKGIDVGIFCALHTYGRKLNWNTHLHL
FT                   SVTRGGICERTGLWKPIYFQMKTTEPCWRAAIVSLLGKAYDELDLSSEECPYIRNKTDW
FT                   SRFLSSQYNRRWKLHFAKKTNNVKPTMNYLGRYLKRPPISASRLSHYAKGGMITFNYLD
FT                   HRTGTTDSLTLSPEEMIRRIVEHYPDKHFKMIRYYGFLSMRRRGEALPRVYAALGMTIE
FT                   AEPKMPGYAAMLKGYVKVDPYECILCESRLVFTNFRVGNSVNDLVTHAIVQSELRAA"
FT   misc_feature    285914..285979
FT                   /gene="speB"
FT                   /locus_tag="VSAL_II0255"
FT                   /note="PS01053 Arginase family signature 3."
FT                   /inference="protein motif:ProSite:PS01053"
FT   repeat_region   complement(order(286318..288541,289547..289626))
FT                   /note="VSa2"
FT   repeat_region   complement(286318..286341)
FT                   /note="IR of VSa2"
FT   CDS             complement(join(286334..286501,286501..287808))
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0257"
FT                   /old_locus_tag="TVSa0096"
FT                   /product="transposase (pseudogene)"
FT                   /note="Similar to Shewanella sp. (strain W3-18-1)
FT                   transposase is66. UniProt:A1RLT8 (EMBL:CP000503) (500 aa)
FT                   fasta scores: E()=2.1e-118, 56.998% id in 493 aa. CDS
FT                   contains a frameshift after codon 436"
FT                   /db_xref="PSEUDO:CAQ81011.1"
FT                   /inference="similar to sequence:UniProt:A1RLT8"
FT   CDS             complement(287880..288227)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0258"
FT                   /old_locus_tag="TVSb0084"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR008878"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN4"
FT                   /protein_id="CAQ81012.1"
FT                   /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI
FT                   FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL
FT                   GHQPVHYQTTL"
FT   CDS             complement(288224..288538)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0259"
FT                   /old_locus_tag="TVSb0085"
FT                   /product="transposase"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN3"
FT                   /protein_id="CAQ81013.1"
FT                   /translation="MQKDKKRTPEQWHALFESQQSSKLSAAEFCRNHNILPKTFSARKA
FT                   RWKQKINASTFLKVEALTSTIIATPQLPDIQLSIGKLRLTLPANTEPHWIGLLLKGYQS
FT                   "
FT   repeat_region   288542..289546
FT                   /note="VSa6"
FT   repeat_region   288542..288560
FT                   /note="IR of VSa6"
FT   CDS             288638..289519
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0260"
FT                   /old_locus_tag="TVS4217"
FT                   /product="transposase"
FT                   /db_xref="GOA:B6EH02"
FT                   /db_xref="InterPro:IPR002559"
FT                   /db_xref="UniProtKB/TrEMBL:B6EH02"
FT                   /protein_id="CAQ81014.1"
FT                   /translation="MNKLVDIFCDVDDFCYQFLSQWEKYLVEASERKRKRQSVMSTSEC
FT                   MTIVIAFHQSNHRDFKNFYIGLVHQYWKGYFPNLLSYTRFVSKMPSLIAPMCAYFQSIK
FT                   GKPTGIAFVDSTSLKVCHNIRIPRHKVFDGVAKRGKGTMGWFFGFKLHLLINHLGEIIS
FT                   LKITAGNVNDRTPVPDLCKELSGKLYADKGYIGKKLSESLKNSDVDLVTTSRKNMKAKE
FT                   ISAFDKAMLSKRYIIETINDQLKNISQIEHSRHRSVTGFMLNVISGVVAYCLKKQKPRI
FT                   KLSECEFELILA"
FT   misc_feature    288965..289459
FT                   /locus_tag="VSAL_II0260"
FT                   /note="HMMPfam hit to PF01609, Transposase DDE domain,score
FT                   9.3e-30"
FT                   /inference="protein motif:HMMPfam:PF01609"
FT   repeat_region   289528..289546
FT                   /note="IR of VSa6"
FT   repeat_region   complement(289603..289626)
FT                   /note="IR of VSa2"
FT   CDS             289664..290092
FT                   /transl_table=11
FT                   /transl_except=(pos:289664..289666,aa:Met)
FT                   /locus_tag="VSAL_II0261"
FT                   /old_locus_tag="TVS4216"
FT                   /product="hypothetical protein"
FT                   /note="CDS contains a rare Leucine start codon (TTA), or
FT                   may be truncated by the insertion of the upstream IS
FT                   element"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQN8"
FT                   /protein_id="CAQ81015.1"
FT                   /translation="MEVTGELPTLDRSDDIAGPDINNNGIRDDIEKYIEITYQEPKQRT
FT                   AAMQMAKALQMNMVIDVTNKDRNKVKADIRKMDVAVGEALNCLNDQFSGPDAKNTSIVW
FT                   SEIESMMTNTKKRLLAYLSVSKAASGMVFSLQDGSCHD"
FT   CDS             290085..291440
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0262"
FT                   /old_locus_tag="TVS4215"
FT                   /product="membrane protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQN9"
FT                   /protein_id="CAQ81016.1"
FT                   /translation="MTRINRFILISMLFIYPFNFVQASSINEKKCEVQGIVFGFFNGVL
FT                   TTEIQAKDALNKLKKIHGNKNEDGEPIKYELVYNYSNGFEDFVETFEQRLREQEGLLAE
FT                   RYELFFESLHGGGDWWSIIISAVPSAIELRDELTDFAQAAAVEILTKFMENPPTLENYS
FT                   EQQTRIDTWITEGKKLLFVAHSQGNLFVNVAYDYALTQNTREEAVKVVHIAPASPTLRG
FT                   EYVLADLDLVINGLRIVGTVPDITELIPSYLFRPAGLNGEKDFLGHGLLEIYMNPNLQI
FT                   STTVKDYIDDGLNSLEPPSVEASTGLFTATLIWSGLGDVDLSILEPLPLGPWDLVNFEY
FT                   PIGESGYLDTNNTTGYGPERYLVSCDPNIIQTGLYVVYFSNYKHTEGETATVQISSWDK
FT                   GVLGSKDFILEDNRWIPGDSGLVKTFFVYVTKNKDSDEYKIRLVDDPYPANE"
FT   sig_peptide     290085..290153
FT                   /locus_tag="VSAL_II0262"
FT   misc_feature    290103..290162
FT                   /locus_tag="VSAL_II0262"
FT   CDS             complement(291527..292363)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0263"
FT                   /old_locus_tag="TVS4214"
FT                   /product="putative short chain dehydrogenase"
FT                   /db_xref="GOA:B6EQP0"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQP0"
FT                   /protein_id="CAQ81017.1"
FT                   /translation="MNNKPWICITGSASGLGRYLTGKLLNQGHQIIATDINKEALQTVS
FT                   KEDNWISHNLILETLDITVLAEWEQLLERHAPNENRQGNKVFSHLLNIAGFIQPGDAFE
FT                   NTVTQFKRHLDINVMGMINGCSVFLPHFTKRQQGHIINIASFAGILPVPGVVAYSTSKA
FT                   AARSFSNGLAMDLYFTNSPINVSCVCPDLIATPMMDKQVGYGKHSRFVFSGDKPLTVEE
FT                   VGDTILTTVWQKKPIEVALPRKREIQVRLLSLFPNLMLPVYKYLAKKGEKKLARLQ"
FT   misc_feature    complement(291833..292351)
FT                   /locus_tag="VSAL_II0263"
FT                   /note="HMMPfam hit to PF00106, short chain
FT                   dehydrogenase,score 8.9e-08"
FT                   /inference="protein motif:HMMPfam:PF00106"
FT   misc_feature    complement(291845..291931)
FT                   /locus_tag="VSAL_II0263"
FT                   /note="PS00061 Short-chain dehydrogenases/reductases family
FT                   signature."
FT                   /inference="protein motif:ProSite:PS00061"
FT   CDS             complement(292388..292888)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0264"
FT                   /old_locus_tag="TVS4213"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQP1"
FT                   /protein_id="CAQ81018.1"
FT                   /translation="MSTENISPVVTDNLEWLPLLLPGSDGIYVKVLRVEENIGRVVAKV
FT                   KFSQNSSAPRHYHFCQAVAYTISGSWEYDEGKFNVGDVAVEPVGNLHQATSTEGTEMLL
FT                   VFDTDSIHGHLLDNYYPDGSVIRIGVSLFKQLEGKSMADIATFDPTPYIEFFSSYSAAE
FT                   DSH"
FT   CDS             complement(292992..293657)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0265"
FT                   /old_locus_tag="TVS4212"
FT                   /product="hypothetical protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQP2"
FT                   /protein_id="CAQ81019.1"
FT                   /translation="MNSIIKKIGKSKGIVFPPQILDQIGLDLDDKIDIEIIDNYLVIKP
FT                   IYPLRESEQDRNNLNEMFTMQRDSIFREERLYQLEQYILANNKEEFVYKNKYSDSYLYA
FT                   WQERVYPFLHDIDDATIEFHHQFYTPCFYVSKEQVDFLIQYFDEVDLNDQRIPSLHHLE
FT                   HQFIKIDKLGWTKMKLVKACRYLYLNGMFDDHFWGQLLIDCPPSEARSITKQFNRNER"
FT   CDS             complement(293742..294731)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0266"
FT                   /old_locus_tag="TVS4211"
FT                   /product="hypothetical protein"
FT                   /db_xref="GOA:B6EQP3"
FT                   /db_xref="InterPro:IPR016040"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQP3"
FT                   /protein_id="CAQ81020.1"
FT                   /translation="MNHFSSAFITGAGGFIGRHLVERLLKNNVTITALMMEGEAIPSLW
FT                   NNKVNIVTGDVRHLLRMKDNLQPCDVIFHLAAVVGDWGAQQDHIDVTVNGTEQAIELAL
FT                   LWQSHFIVTTSVCAYASQLAKGKLNEQSLLGTPSSPYEFCKQEQERVTKNGVKKGLKAS
FT                   IIRPANVFGVGSGPWVNTLLDMMRNNKPCMIGSGEWDAGLVHVNNLISILIAVANSTYT
FT                   NGDIYLAADGFGVTWKEYMTRLALVADVPPPKNIPLPLARILAPTLEFIGHITQQKTRP
FT                   LITRQSFRLMGGANEFSIKKAQKELDYSPFITFDQAMNELKNHFSKQK"
FT   misc_feature    complement(293952..294710)
FT                   /locus_tag="VSAL_II0266"
FT                   /note="HMMPfam hit to PF01073, 3-beta hydroxysteroid
FT                   dehydrogenase/iso, score 4.2e-10"
FT                   /inference="protein motif:HMMPfam:PF01073"
FT   misc_feature    complement(294042..294713)
FT                   /locus_tag="VSAL_II0266"
FT                   /note="HMMPfam hit to PF01370, NAD dependent
FT                   epimerase/dehydratase fam, score 3.8e-18"
FT                   /inference="protein motif:HMMPfam:PF01370"
FT   misc_feature    complement(294093..294707)
FT                   /locus_tag="VSAL_II0266"
FT                   /note="HMMPfam hit to PF07993, Male sterility protein,score
FT                   5.5e-10"
FT                   /inference="protein motif:HMMPfam:PF07993"
FT   CDS             294891..295898
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0267"
FT                   /old_locus_tag="TVS4210"
FT                   /product="HTH-type transcriptional regulator, AraC family"
FT                   /note="Similar to Mycobacterium tuberculosis Putative
FT                   virulence-regulating 38 kDa protein VirS UniProt:Q06861
FT                   (340 aa) fasta scores: E()=6e-17, 23.724% id in 333 aa"
FT                   /db_xref="GOA:B6EQP4"
FT                   /db_xref="InterPro:IPR018114"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQP4"
FT                   /inference="similar to sequence:UniProt:Q06861"
FT                   /protein_id="CAQ81021.1"
FT                   /translation="MFLVRSGALDGYEKLVQRLGRNPIHIMSEVGLSTALLRDPNMYLS
FT                   YSKVSELLEITASHCDEPLFGLLLSEAQSNLTIGDLGLTATQQLTIFDAIVHIKKYIYL
FT                   HADGVNINTIRSGLKATVIIDFSFDGIRGNNQLTQLSVGLIYNNLRYLTGNHESNFYLS
FT                   LKQIKPEIQHESMLGYFKEGIQFSAVHDAVTFSSEWLDKSPHFEQYQIRECLQKNIQEL
FT                   KKHYPSDLRYQVSMVIKSLLSSSECSLELVANALNIHPRSLQNQLKSESLTYGGILQSI
FT                   RKEIAIEQLCDPSCSITELALSLGYAEVSIFSRNFKQWFGVSPKEYKSNAVNKK"
FT   misc_feature    295629..295694
FT                   /locus_tag="VSAL_II0267"
FT                   /note="Predicted helix-turn-helix motif with score
FT                   1286.000, SD 3.57 at aa 284-305, sequence
FT                   CSLELVANALNIHPRSLQNQLK"
FT   misc_feature    295743..295877
FT                   /locus_tag="VSAL_II0267"
FT                   /note="HMMPfam hit to PF00165, Bacterial regulatory
FT                   helix-turn-helix protei, score 1.5e-08"
FT                   /inference="protein motif:HMMPfam:PF00165"
FT   CDS             complement(295927..296832)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0268"
FT                   /old_locus_tag="TVS4209"
FT                   /product="putative exported protein"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQP5"
FT                   /protein_id="CAQ81022.1"
FT                   /translation="MNKTHLISSLILGLCSASAFASVSLLSSSQCQAMTSNNVMAPKAP
FT                   VQCDRLRNVTFTHYNFEGKTATGKVVVLDAVAPYVDRIFNELYKKGFPIAQAQPIEQFG
FT                   GDDNKSMDANNTSAFNYRPIAGKSSLSLHAYGVAVDINPLQNPFVEFTSWGTATFKPLK
FT                   GHEYANRMLNRLGKKEQRGLAESAIATFTNNGFVYWGGYWDTPIDFQHFQTSRDMAYLM
FT                   TDMPEKDASTFFKNYVGWVSSCQQNYGSEQMDTFLDYSAYLKTELNTTSSLNRLYKANP
FT                   NAVIQAINKTAKASQTRCFG"
FT   sig_peptide     complement(296734..296832)
FT                   /locus_tag="VSAL_II0268"
FT   CDS             297158..300256
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0269"
FT                   /old_locus_tag="TVS4208"
FT                   /product="putative membrane protein"
FT                   /db_xref="InterPro:IPR008023"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQP6"
FT                   /protein_id="CAQ81023.1"
FT                   /translation="MSNKFKLAVDKFRSLHGAVRWSTYFLTAYLFYAAMLGLLVPYIAK
FT                   QQIPEQLSALIERPVTLTDITFNPFTLQLDVQGFAILEDTTPFISLEHASVRLNFWQSI
FT                   FNAAIFVEHITINKPFVDIERLNNPDELVFNFSDILTTIAKKTASDPIVEEPTDEVIDR
FT                   HALLFPVLIKHTRITQANVQFLDGVSGAKLEYPNINLEVGAFSTQGLLTDAVPTNHYQL
FT                   HMTDADSGTVDVQGQVQLTPLEVVGNLDIKQIQLPRLWGFIAKDMVAKLTSGKVSLASN
FT                   YHVVQTIGETENDDVMAITTDRGMFSLNDLNFDADDKSILSLPVFSVNDIKTDVNQQTI
FT                   DIASITSNDLNVAVNVNKKGVDLIHLFTPKSFSQESTKSPEKTEVKSPKESAVVNSDND
FT                   GVTAESKEKPTPWLVTLNGIEIKNYQLNAEESVVTGKPTKWQLSPINLTTSQIVSDLSK
FT                   PIGFDLSTSVNGKGEINVSGTADPKLQSVLADIDVSALNLAQFQPYLATAVNATLTNGE
FT                   LNTQAKLNADATGKAIVKGGIQIKRLSIRDNHRRKPFLKWRSLAVNTFTFDLQKSKLAI
FT                   DTLSLSQPYARVVINEDRSTNIGDLIRTPSTSKKAKTKSSSKGKKDKPFALSVRKIAFN
FT                   NGSAFFADNSLTPNFSSGIEQLKGNIGHVSSVPGTKATVDISGNIEKYAPVKVKGEINP
FT                   LLKEPYLNLDVVFKSVELTTVNPYSGTYAGHYIDKGQLTLALNYHLENNQLKGSNHVII
FT                   DQLQLGQASDSDTATSLPLELAIALLQDNDGVIDLGVEVSGDVNDPEFSLGAVIWSTIS
FT                   NIITKAVTAPFTFIAGLAGSDEELNVIAFDFGVNTLTPEEQEKLQTLGTALETRPKLKL
FT                   TVDGAVNAPEDSKALALAQFNEKLAETAQITEAKLPANLSASTMPTSGVLSDALKALYE
FT                   KESGKDADDVEDKIEQDQENKGVELTDEELAKRWHIALYNLALNKQEVAKGELGQLAQQ
FT                   RAQAVKAYLVDVVNIDASRVFLLDSRFDIEQDTSSVLLTLEAK"
FT   misc_feature    297218..297286
FT                   /locus_tag="VSAL_II0269"
FT   misc_feature    298385..298852
FT                   /locus_tag="VSAL_II0269"
FT                   /note="HMMPfam hit to PF05359, Domain of Unknown Function
FT                   (DUF748), score 3.4e-07"
FT                   /inference="protein motif:HMMPfam:PF05359"
FT   misc_feature    299024..299494
FT                   /locus_tag="VSAL_II0269"
FT                   /note="HMMPfam hit to PF05359, Domain of Unknown Function
FT                   (DUF748), score 1e-29"
FT                   /inference="protein motif:HMMPfam:PF05359"
FT   repeat_region   complement(300371..302587)
FT                   /note="VSa2"
FT   repeat_region   complement(300371..300394)
FT                   /note="IR of VSa2"
FT   CDS             complement(300387..301874)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0270"
FT                   /old_locus_tag="TVS4207"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR004291"
FT                   /db_xref="UniProtKB/TrEMBL:B6EQP7"
FT                   /protein_id="CAQ81024.1"
FT                   /translation="MTDKIKPLPDTIDELKALVLQLENKYNRLLEQFRLAQHQRFGKSS
FT                   ESDSTQFDLFNETEEEIIIENDDTQTITYTRQKPKRQRLPEDLPRTVIIHDIKDKTCKC
FT                   CGLEMHAMGKDISEKLEFVPAKVEVIQHVRPKYACRNCEKNNTSVDIKQAPMPASPIPK
FT                   GIATASLLAQIITAKFQYSLPLYRQETLFQQWGIIIGRRTMADWLIKCSVLFTPLNNEL
FT                   HRILLEQPTLHCDETTVNVLDVEKAKCYMWVYCSGYDSPGSGVLPGIVLYDYQSSRHGY
FT                   HPVNFLKGYNGYLHTDGYQGYEQTEAILVGCWAHARRRFIEAQRVQVKGKTGSADWVLS
FT                   KIQKLYRIESLLKEASPEAKYVARQTEARDLLKELRDWLDSAVSRVSPKTKLGEAISYT
FT                   LNQWDKLVRYIDDGLLSIDNNRAERAVKPFVIGRKNWLFSGSTAGADSSAMLYSIVETA
FT                   KANGLIPYDYIRYCLDRLCVGSPDIDSLLPWNVKNKV"
FT   CDS             complement(301946..302293)
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0271"
FT                   /old_locus_tag="TVS4206"
FT                   /product="transposase"
FT                   /db_xref="InterPro:IPR008878"
FT                   /db_xref="UniProtKB/TrEMBL:B6EGN4"
FT                   /protein_id="CAQ81025.1"
FT                   /translation="MNVFTDVSTIYLHRDFVDFRKAINGLVVIVEQEMQLSPFSDALFI
FT                   FCNKPRDKLKILYWDKTGFALWYKRLDEDRFKWPRNINNDTLALSEQQLTLLLQGFDIL
FT                   GHQPVHYQTTL"
FT   misc_feature    complement(301952..302278)
FT                   /locus_tag="VSAL_II0271"
FT                   /note="HMMPfam hit to PF05717, IS66 Orf2 like protein,score
FT                   5.1e-32"
FT                   /inference="protein motif:HMMPfam:PF05717"
FT   CDS             complement(join(302290..302343,302342..302506))
FT                   /pseudo
FT                   /transl_table=11
FT                   /locus_tag="VSAL_II0272"
FT