EBI Dbfetch

ID   EU916744; SV 1; linear; mRNA; STD; PLN; 1594 BP.
XX
AC   EU916744;
XX
DT   31-AUG-2008 (Rel. 97, Created)
DT   31-AUG-2008 (Rel. 97, Last updated, Version 1)
XX
DE   Coffea canephora galactosyl transferase (GT1) mRNA, complete cds.
XX
KW   .
XX
OS   Coffea canephora
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; core eudicotyledons;
OC   asterids; lamiids; Gentianales; Rubiaceae; Ixoroideae; Coffeeae; Coffea.
XX
RN   [1]
RP   1-1594
RX   DOI; 10.1093/aob/mcn076
RX   PUBMED; 18562467.
RA   Pre M., Caillet V., Sobilo J., McCarthy J.;
RT   "Characterization and expression analysis of genes directing galactomannan
RT   synthesis in coffee";
RL   Ann. Bot. 102(2):207-220(2008).
XX
RN   [2]
RP   1-1594
RA   Mendocilla Sato E., Pre M., de Kochko A., McCarthy J.;
RT   ;
RL   Submitted (22-JUL-2008) to the EMBL/GenBank/DDBJ databases.
RL   Nestle Research and Development Centre, 101, Avenue Gustave Eiffel, Tours
RL   37097, France
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1594
FT                   /organism="Coffea canephora"
FT                   /mol_type="mRNA"
FT                   /tissue_type="young leaves"
FT                   /note="library provided by A. de Kochko, IRD Montpellier,
FT                   UMR 1097 DGPC - Equipe Genomique et Qualite du Cafe;
FT                   derived from dbEST EE194854"
FT                   /db_xref="taxon:49390"
FT   gene            <1..1594
FT                   /gene="GT1"
FT                   /note="CcGT1"
FT   5'UTR           <1..8
FT                   /gene="GT1"
FT   CDS             9..1343
FT                   /codon_start=1
FT                   /gene="GT1"
FT                   /product="galactosyl transferase"
FT                   /db_xref="GOA:B5LWS8"
FT                   /db_xref="InterPro:IPR008630"
FT                   /db_xref="UniProtKB/TrEMBL:B5LWS8"
FT                   /protein_id="ACH58908.1"
FT                   /translation="MTRIKVHTKAPTFFRDCRSFILAVLVAILLFYALWSFTETAWTNL
FT                   SVSAIFSNTTTDHCTSQPQSLNRAHDPPEPTFYDDPELCYTLDKPIDNWDDKRKSWLKL
FT                   HPSFADSIQDRILLLTGSQPSPCKSPIGDHLLLRGSKNKADYCRIHGYGIFYSNACFDP
FT                   KLCNVWAKVAVIRASMVAHPEAEWIWWMDSDAIITDMDFKIPLQRYKEHNLVVPGWPNL
FT                   VYEKKSWVAVNTGSFLMRNCEWSLEFLDVWASMSPRSPDYKYWSETLMSTLSDKVIPGA
FT                   DEQSSLVYLLLREKKKWGDMTYLENQYYLHGYWVAIVGRLNDIIKKYLDTEAKVPVLRR
FT                   RVAEVVSESLDGVWEKYLRDAGGFGNSGWRRPFITHFTGCQPCTGKRDPAYKGNACWVA
FT                   MEKALNFADNQVLRRYGFMHPDLGNGSSVSPVPFDFPADEKEELV"
FT   3'UTR           1344..1594
FT                   /gene="GT1"
XX
SQ   Sequence 1594 BP; 432 A; 351 C; 404 G; 407 T; 0 other;
     cagcagctat gaccagaatc aaggttcaca ccaaagcgcc gacatttttc agagattgca        60
     ggtccttcat cctcgctgta ttagtcgcca ttctactctt ttatgctctc tggtccttca       120
     ctgaaactgc ttggacaaac ttatccgtct ccgccatttt ttcaaacacc accaccgacc       180
     actgcacttc ccaaccccaa tccctcaacc gagcccacga cccgccagaa cccacgtttt       240
     acgacgaccc ggaactctgt tacaccctag acaagcccat cgataactgg gacgacaaga       300
     gaaaatcatg gctgaaactt cacccctcgt ttgccgacag catccaagat cgcatactcc       360
     tcctcacagg atcacagccc tcaccctgca agagccccat cggcgatcat ctactcctca       420
     gaggttccaa gaacaaagcc gactactgca gaatccacgg ctacggtatc ttctacagta       480
     atgcttgttt tgatccgaaa ttgtgcaacg tctgggctaa agtagctgta attcgagctt       540
     ccatggtggc ccacccggaa gccgagtgga tctggtggat ggactcggat gccatcatca       600
     ccgacatgga cttcaaaatt ccgttacaga ggtacaagga gcacaatctc gtggtacccg       660
     gctggcccaa cttggtttac gagaagaaga gctgggtagc cgtaaacacc gggagttttc       720
     tgatgagaaa ttgtgaatgg tccttggagt tcttggatgt ttgggcgagc atgagcccgc       780
     ggagccccga ttacaagtat tggagcgaaa cgttaatgtc caccctttcg gataaggtta       840
     ttccaggagc tgatgagcaa tcgtctctag tttatttact attgagggaa aagaagaaat       900
     ggggagacat gacttatctg gaaaatcagt attacttgca tggctattgg gtcgcaattg       960
     tggggaggtt aaatgacata attaagaagt atttggatac agaggcaaag gtgccggtgc      1020
     tgaggaggag agttgcggaa gtggtgagtg agagcttgga tggggtgtgg gagaagtacc      1080
     tgagagatgc gggtggtttt ggaaatagtg ggtggagacg gccgtttatt actcatttta      1140
     ccggatgtca gccgtgtacc gggaaacgtg acccggcgta caaggggaac gcctgctggg      1200
     ttgcgatgga gaaggctctg aattttgccg ataatcaggt tctccggagg tatggtttta      1260
     tgcacccgga tttagggaat gggtcgtcgg tttctccagt accctttgat tttccggccg      1320
     acgagaagga agaattggtg tagagttaag tggaggaggt aagtaaaggg tggttgtgtc      1380
     tgtgttttgt atagttttgt cttgctttct ttgtatctat ccatcaaaat ggtgaagtga      1440
     gagaacaaaa gcaaacgatt ctcacggagg cttcaccaag ttcctcaatc gagtgaattt      1500
     caagttcaag agcttttacc aatgcttttt ttgtcaatat aaaaagagaa ttaatttggt      1560
     tgtttgcaaa aaaaaaaaaa aaaaaaaaaa aaaa                                  1594
//