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EBI DbfetchID EU627613; SV 1; linear; genomic RNA; STD; VRL; 7088 BP. XX AC EU627613; XX DT 03-MAY-2008 (Rel. 95, Created) DT 15-AUG-2008 (Rel. 96, Last updated, Version 2) XX DE Parana virus strain 12056 segment L, complete sequence. XX KW . XX OS Parana virus OC Viruses; ssRNA negative-strand viruses; Arenaviridae; Arenavirus; OC New world arenaviruses. XX RN [1] RP 1-7088 RX DOI; 10.1016/j.mib.2008.06.001 RX PUBMED; 18602020. RA Charrel R.N., de Lamballerie X., Emonet S.; RT "Phylogeny of the genus Arenavirus"; RL Curr. Opin. Microbiol. 11(4):362-368(2008). XX RN [2] RP 1-7088 RA Emonet S.F., de Lamballerie X.N., Charrel R.N.; RT ; RL Submitted (09-APR-2008) to the EMBL/GenBank/DDBJ databases. RL MIND, The Scripps Research Institute, 10550 North Torrey Pines Road, La RL Jolla, CA 92037, USA XX FH Key Location/Qualifiers FH FT source 1..7088 FT /organism="Parana virus" FT /segment="L" FT /strain="12056" FT /mol_type="genomic RNA" FT /country="Paraguay" FT /db_xref="taxon:45222" FT CDS 92..379 FT /codon_start=1 FT /product="Z protein" FT /db_xref="GOA:B2MW50" FT /db_xref="InterPro:IPR003224" FT /db_xref="UniProtKB/Swiss-Prot:B2MW50" FT /protein_id="ACC94301.1" FT /translation="MGLRYSKAVKDKYGDREIEGRATMTLNLPQGLYGRFNCKRCWFAT FT KGLIACSDHYLCLNCLTIMLSDGNFCEVCGKTLPKKIVFEESPSAPPYDG" FT CDS complement(451..7059) FT /codon_start=1 FT /product="L protein" FT /note="polymerase" FT /db_xref="GOA:B2MW51" FT /db_xref="InterPro:IPR007099" FT /db_xref="InterPro:IPR010453" FT /db_xref="InterPro:IPR014386" FT /db_xref="UniProtKB/Swiss-Prot:B2MW51" FT /protein_id="ACC94302.1" FT /translation="MTEIISELKDLIRKWVPDEEHYIEQKSLTLSQVHTRAVVIEGLKL FT LSLIVEVDSCLKHKCIPNRNKTVNMILKDHKLVGPTLPECTPDGYYLCGDVLILLEVFV FT RSNQSAFEKKYAADFEKLMSLAKDLTSYGITLVPVIDGRSNYYVEAIPDWVIERLRWLL FT LKVMDSLKDEGEDIEETEYSRLIHSLSTMENQNLGLESISQLKQTGLTYKKKLQALFTK FT NIRPNMSLGECRLKLIEIFNEFRLRLESGTVERAYTQTNQDFLLNKLKEHSLLKVSRVS FT KFDSKGDCHLCSNHLIKVLGLLKRQTTDEKEAPRIGMIRREYGLILSTCNKIKGQKILN FT TRRNTLLSLDVVMFNAFLSLLRTYGEIVFDLMVGGCLQSVNDRLVSPSLIIDLYNKKCT FT RNPQWLSKVMLKLNLLPGYIQEDFKVFVRPHLVELDLDLWSNYLELYSTTFERRLEIQY FT TVSEEEVHEKTDPEVIEWLEMKESTFKQYLDSLSTLSLGLVNSMKTSGTSRFHINQPND FT YYGTVKCEECFFQSLHHAYGVSLLYQKTGERNRCYSLCSNSGKVGHIVSFYCDPKRFFL FT PIMSQQVLLSMTQEMLSWLDFIKGDDLNLISSMLRRLILSVLACPSKRVQLYLQGLRYF FT LMAYVNEIHHVQLLAKLEVEVKSRSEWATMTLADDLVVALLNMSNQPNMSKTFKFLLNV FT SYLCHLITKETPDRLTDQIKCFEKFMEPKIDFGSVIVNSSLNGNMTEEEESKILLDIDR FT LLSKQLNTSDQISKPGVNPTVMSLCCSLFNLGELDVNGKLKRDPQSPSFTSTALDMSSN FT KSVVVPKLDELGNPLSTYDYAAVVSSVIVDLSEGFKNKLRYKLDPHTLKYKIYKRFLSL FT VSDKTPKENKLEMSQDEFLDEITDEQLEMIEKIEMEVNECLSKAANVEPRIGTGPDDKN FT PLKSLWAKEILCVIESETSKHEVKDFDYTLFHHETYKELVELVFNSNSRNQYFTDRILN FT PCPLEYLMKNLCRKYYEEEDYFECFKYILVSTGFDNKVGRYDHKNMCRLGFKQSATRIR FT EDARISCRESNSESILKRLDKSFFTNSSLRNLCFYSEESPTAFDSVSSDLGRLKFGLSY FT KEQVGGNRELYVGDLNTKLMTRLIEDYFECLMEKMKYTCLNNEAEFERALLDMKSVVRR FT SGFTVSMDHSKWGPHMSPVIFSQLFKALQFSLPDGSQIDKEPILNLLSWHIHKVVEVPF FT NVVHAYTKGYLKRLCGLMDNRTSKTEDFMDKFFADEVIPSHISSVLDMGQGILHNVSDF FT YGLITEQFISYALQTCVGVLSMAFTSSDDEILLGVTNDLKNQDESLDIDKSLEFLEFHN FT YLSATLNKFISPKTVAGTFACEFKSRFYIWSQEVPLLTKFTAAALHNVKAKAPNQLCET FT IDTIQDQCVANGVSVEVVGAISKRTNNIIKYSGHPSNPFLCLNDMDVKDWVDGSRGYRL FT QRSVENVYNDDEIPEYVRDMAARLFYLIRNGQVQEEYLISSMQSDPDECFTLLAGILGV FT PEQNISRLLDIRWLNLRAHGDLRMVLRTKLMGSNRVIQREEVPSLIKSVQSKLSKNFVR FT GARKIITDAVNKSAFQSCIAAGFVGICKSMGSKCVRDGKGGFMYIKDILSKIQYHKNCD FT VCKVSSGIYCKESLKAVSDFSRPLFWDYFALVLTNACELGNWVFSKPKIPDVVYKLDNP FT NFFWPVKPASHTELEDKIGMNHVLYSIKRNYPDIFEEHLAPYLTDLNTLKLSWVQKVKF FT LDICVAIDMVSESLGIISHMIKRKREELYIVKQNEQSMSHTRESQELAGGFRVTNEQIC FT HNFLLQILFDSMITPVLLTSSQFKKYFWYGEVELLPNDCEHPLGQLTQFIMDCKKLNLS FT RAMNLDDLDVGFVHSTIKLSDVFLNFSTFLTKVDWENRKDYNNLEELLKSTLESQLVLS FT IGLTFTHLRRSLKYKYERSTVYTIIAKVILDIEQLTLNEDDQICLIVQEVECYVSQSGG FT DHISLDGAALIPLTPIISGTETLCLDEVAIRQDDMLKGVSKHLGNVKLDFSSHIKELKN FT KFSYKIQGPQVGMNPLHIDKGIIMEGDKVVSRLDVNVTAKSLFMALELLTDDELIRKFL FT RSLFYYLKSVKKGTALISLLSSDLKDIAEVYFNHFKDILKEEADWVSFGSFQLVYSKSL FT DTIMIGDEKGEFRLKGVNCKRLIPVIPAVQEIE" XX SQ Sequence 7088 BP; 2146 A; 1562 C; 1125 G; 2255 T; 0 other; cgcaccgagg atcctaggct tattgatctt cgcgcatata ggaaagtcta cacacttgtc 60 tgtgtgaggc ccatccacct atttgaccaa catggggttg aggtactcca aagcagtcaa 120 agacaaatat ggagatcgag aaattgaagg cagagccacc atgacactca atttgccaca 180 aggtctctat ggtaggttca actgcaagcg ttgttggttt gcaacaaaag gattgatagc 240 ctgtagtgac cactatcttt gtctaaactg cctgactata atgttgagtg atggcaactt 300 ttgcgaagta tgcggaaaaa cacttccaaa aaagatagtc tttgaagaga gtccatctgc 360 tccaccctac gatggctaaa gggaggccct cggcgcaccc cccaaagggg ggtgcgccgg 420 gggccccccc ggcctggggc cgggatgcgt tcactcgatt tcctgaactg ctggaatcac 480 tggtatcaac ctcttgcaat taacaccctt caacctgaat tcaccttttt catccccaat 540 catgatagta tccagactct tgctatacac aagctggaat gaaccaaaac tcacccagtc 600 agcttcttcc ttgagtatgt ctttaaagtg gttgaaatat acttctgcaa tgtctttaag 660 gtctgatgac agaaggctga tcaacgctgt tccctttttt actgacttta aataataaaa 720 caaggacctt aaaaatttcc tgataagttc atcatctgtc aacagttcta gagccataaa 780 caaagatttt gctgtgacat tcacatcaag tcttgaaact actttgtcac cctccataat 840 gattccctta tcaatgtgga gggggttcat acccacttgt ggtccctgta ttttgtagga 900 aaatttgttt tttaattctt ttatatggga actaaaatca agtttaacat ttcccaggtg 960 ctttgaaaca ccttttaaca tgtcatcttg cctaatggca acttcatcca agcacagtgt 1020 ttcggtaccc gagataatgg gcgttaatgg tattaaggca gcaccatcca gagatatatg 1080 atctcctcca gattgtgaaa catagcactc aacctcttgg acaattaagc aaatctgatc 1140 atcttcattt aaggtgagct gctctatatc caatatgacc ttagctatta ttgtataaac 1200 agttgatctt tcatacttgt acttaagact tcgtctaaga tgagtaaaag tcaacccaat 1260 gctcaacact aattggcttt ccagagttga cttcagtagt tcttcaagat tattgtagtc 1320 ttttctattc tcccagtcca cttttgttaa gaatgttgag aaattcaaaa atacatcaga 1380 taatttaatg gttgaatgta cgaacccaac atcaagatca tctaaattca tagctcgcga 1440 taagttcaat ttcttacaat ccattataaa ttgtgttaac tgtcccagag ggtgttcaca 1500 atcatttggc aataactcaa cttccccata ccaaaagtat tttttaaatt ggctgcttgt 1560 tagaagaaca ggtgtaatca ttgaatcaaa taggatctgc aatagaaaat tatggcatat 1620 ttgttcattc gtcactctaa agcctccggc aagttcttga gactctctag tgtgagacat 1680 agactgctca ttctgtttca ctatgtataa ttcttccctt ttcctcttga tcatgtggct 1740 tataataccc aagctttcac tgaccatatc tattgccaca cagatatcta agaacttgac 1800 cttttgcacc caagacaact ttagtgtatt taaatctgtc aaataaggtg ctaaatgttc 1860 ctcgaagatg tcggggtagt tcctctttat tgaatatagt acatgattca taccaatttt 1920 gtcctcaagt tcagtatgtg atgcaggctt tactggccag aagaagttgg gattatccaa 1980 tttgtaaacc acatcaggaa tcttaggttt agaaaatacc cagtttccta attcacatgc 2040 attggtcaag acaagggcaa aatagtccca aaacaaaggc cttgaaaaat cactcacagc 2100 tttaagggat tccttacaat atattccact agacactttg caaacatcac aattcttatg 2160 atactgaatt ttactcaaaa tatccttaat gtacatgaaa ccacccttac catctcggac 2220 acatttagat cccatactct tgcaaattcc gacgaaccct gctgcaatgc agctctgaaa 2280 agcagattta ttcacagcat ctgttatgat cttccttgcc cctcttacaa agttcttcga 2340 taattttgat tgaacagact taattaagct gggcacttct tctctctgta taaccctatt 2400 agagcccatt aactttgtcc tcaagaccat tctcaaatct ccatgtgccc ttaaattcag 2460 ccatctaatg tcaagcagcc ttgagatatt ctgctccggc accccaagga tccctgcaag 2520 cagtgtgaaa cactcatcag gatctgattg catagatgat attaaatact cctcctgaac 2580 ctgaccattt ctgatcaaat aaaacaacct tgcagccata tctctgacat actcaggtat 2640 ctcatcatca ttgtatacat tttccacaga tctttggagc ctataccccc ttgacccatc 2700 aacccaatct ttcacatcca tgtcattcag gcacaggaat ggattacttg ggtgacctga 2760 gtacttaatt atgttatttg ttctctttga aattgctcca acaacttcaa ctgaaacacc 2820 attggcaaca cactgatctt gtatggtgtc aattgtctca cataactgat taggtgcctt 2880 tgctttcaca ttatgcaaag cagctgctgt gaactttgtc aaaagaggca cttcctgtga 2940 ccaaatataa aaccttgatt tgaattcaca tgcaaatgta ccagcaacag tctttggact 3000 aatgaactta ttgagagttg ctgacaagta gttgtgaaat tctaaaaact ccaatgactt 3060 gtcaatgtct aaggattcat cctggttctt taaatcatta gtaacaccta gcagaatctc 3120 atcatcacta gaggtgaatg ccatactaag aacaccaaca cacgtctgaa gtgcataaga 3180 tataaattgt tctgttatca atccatagaa atcagagaca ttatgcagaa tcccttgtcc 3240 catgtctaat acagaagata tatgagacgg gatcacttca tctgcgaaaa acttgtccat 3300 gaaatcttca gttttactag tcctattatc cattagccca catagccgtt tcaaataacc 3360 ttttgtataa gcatgtacca cattaaaggg aacctcaacc actttatgta tatgccaact 3420 aaggagattc aaaataggtt ctttgtctat ttgggatcca tctggaaggg aaaactgcaa 3480 cgccttaaac aactgtgaaa agataactgg actcatgtgt ggcccccatt ttgaatggtc 3540 cattgaaaca gtaaaaccag accttctaac aacagacttc atatctaaga gagccctctc 3600 aaactcagct tcattattca gacatgtgta cttcatcttc tccattaggc attcaaaata 3660 atcctcaatc aatcttgtca ttaatttggt gtttaaatcc cccacatata attccctatt 3720 tccaccaact tgttccttat aagacaatcc aaacttcaac cttcccagat ctgaagaaac 3780 actatcaaat gcagttggtg attcttcaga gtagaaacaa agatttctaa gagatgaatt 3840 agtgaaaaag ctcttgtcca acctctttaa aattgactca gagttgctct ctctacaact 3900 aattctagca tcctctctga ttcttgtagc agattgctta aaacctagtc tacacatgtt 3960 tttatgatca tacctaccca ccttattgtc aaacccagta gaaaccagga tgtatttaaa 4020 acattcaaag taatcctcct cttcataata tttcctacat aggttcttca ttaaatattc 4080 aagtgggcat ggattcaata tcctatcagt gaaatattga ttcctagaat tgctattaaa 4140 aaccagttca accaactcct tatatgtttc atgatgaaac aaggtataat caaagtcctt 4200 aacctcatgt ttggatgtct ccgattcaat aacacagagt atttcttttg cccacaatga 4260 ctttagagga ttcttatcat ctggtccagt tccaattcta ggttccacat tggctgcttt 4320 gcttaagcat tcattgacct ccatttctat tttctcaatc atttctaact gttcatcagt 4380 tatctcgtcc aaaaactcat cctgagacat ctcaagttta ttttcttttg gtgttttgtc 4440 actcacaaga gaaaggaacc ttttgtatat tttatatttt aaagtgtgtg gatccaactt 4500 gtacctcaat ttatttttga atccctcaga caaatcaaca atcactgatg aaactactgc 4560 tgcataatcg tatgtactaa gtgggttgcc caactcatcc agttttggca ccacaacact 4620 cttattgcta ctcatatcca atgcagtact tgtaaatgaa ggagactgtg gatccctttt 4680 caacttgcca ttcacatcca gttctcctaa attgaacaat gaacaacaaa gactcataac 4740 agtagggtta actcctggtt tactaatttg atctgatgta ttcaattgct tacttaggag 4800 tctatctatg tctaaaagaa ttttggactc ctcttcttct gtcatattac catttaaact 4860 agagtttaca atgactgatc caaaatctat ttttggctcc atgaactttt caaaacattt 4920 aatttgatca gtcaatctat ctggagtctc ttttgtgatc agatggcaca agtaagacac 4980 attcaacaaa aacttaaatg ttttagacat atttggttga tttgacatat ttaacagtgc 5040 aactactaaa tcatcagcta atgtcattgt tgcccactct gacctacttt tgacttcaac 5100 ctctagtttg gccaataact gaacatgatg aatttcattg acatatgcca ttaaaaagta 5160 tctcaatcct tgcagataaa gttgcaccct tttggacgga catgctaaaa ctgataagat 5220 caaccttctt agcatagatg atatcaggtt caagtcatca cccttgatga agtccaacca 5280 tgacaacatc tcttgagtca ttgacaacaa aacctgttgt gacattatag gcaaaaagaa 5340 tctcttaggg tcacaataaa atgagactat atggccaacc ttgccactgt ttgagcataa 5400 tgaataacat ctgttccttt ctcctgtctt ctgataaagt aatgaaacac catatgcatg 5460 gtgtaaactt tgaaaaaaac attcttcaca tttaacagtg ccgtagtaat catttggttg 5520 atttatatga aatctggaag tccctgatgt cttcatcgaa ttaaccaaac ctagactaag 5580 tgtggacaag gaatcaagat actgtttaaa tgttgattct ttcatctcca gccattcaat 5640 aacttcagga tcagtctttt catgaacctc ttcttctgaa actgtgtact gtatttccag 5700 tcttctttca aatgtagttg agtacaattc taaataattt gaccataagt ccaaatcaag 5760 ctcaactaaa tgaggcctta caaacacctt aaaatcttcc tgaatgtacc caggaagcaa 5820 atttaatttt aacatcactt tggacaacca ctgagggttt cttgtgcact tcttattata 5880 aagatcaatg ataagtgacg gggacaccag cctatcatta acagattgaa gacaaccacc 5940 caccattaaa tcaaacacaa tttctccgta ggttctcagt aaactcagaa atgcattaaa 6000 catgaccaca tccagtgata ataatgtgtt tctcctagta tttagaatct tttgcccttt 6060 tatcttatta catgtagaga gtataagacc atattctctc cttatcatac caattctagg 6120 agcttctttc tcatctgtag tctgtctctt cagcaagcca aggaccttga ttaggtgatt 6180 tgaacataag tggcagtccc ctttactatc aaatttcgaa acccttgaca cctttaaaag 6240 agaatgctct tttaacttat tcaacagaaa gtcttggtta gtttgagtgt aggccctttc 6300 cacagtgcct gactctaatc taagcctaaa ttcattaaat atctcaatta gcttcagtct 6360 gcattctcca aggctcatgt ttggtctaat gttctttgtg aaaagagctt gaagtttttt 6420 cttgtacgtc aggccagttt gcttcaattg gctaatggac tctaatccaa gattctggtt 6480 ttccatagta gacagactat gaatcagtct gctgtattct gtttcctcaa tatcctcacc 6540 ctcatcttta agactatcca tgacttttag taacaaccac ctcaatctct caatcaccca 6600 atccggtatt gcctcaacat aatagttact cctcccatca ataacaggaa ccaatgttat 6660 gccatatgat gttaaatctt tggcaagact cattaacttt tcaaaatctg ctgcatattt 6720 tttctcaaaa gcagattgat tggacctcac gaaaacctcg aggagtataa ggacatcccc 6780 acatagataa taaccatcag gtgtgcattc cgggagggtt ggaccaacca acttatgatc 6840 tttgagtatc atgttgactg ttttattcct attcggaatg catttgtgct ttagacaaga 6900 gtcaacttcc actatgagtg acagtaattt gagaccttct ataacaacag ccctggtgtg 6960 aacctgggat aaggtcaaag atttttgttc tatataatgt tcttcatctg ggacccattt 7020 tcttatgaga tcctttagtt ctgaaattat ttccgtcatg atctaggaag cctaggatcc 7080 tcggtgcg 7088 // |
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